RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 C12orf60Q5U649 245 aa18.8■□□□□ 0.6
SMARCA4-203ENST00000429416 COX16Q9P0S2 106 aa18.8■□□□□ 0.6
SMARCA4-203ENST00000429416 A0A1W2PRG0 241 aa18.79■□□□□ 0.6
SMARCA4-203ENST00000429416 SREBF2Q12772 1141 aa18.79■□□□□ 0.6
SMARCA4-203ENST00000429416 SKIV2LQ15477 1246 aaKnown RBP18.79■□□□□ 0.6
SMARCA4-203ENST00000429416 SERPINA10Q9UK55 444 aa18.79■□□□□ 0.6
SMARCA4-203ENST00000429416 NEDD9Q14511 834 aa18.79■□□□□ 0.6
SMARCA4-203ENST00000429416 PDIA6Q15084 440 aa18.79■□□□□ 0.6
SMARCA4-203ENST00000429416 SFMBT2Q5VUG0 894 aa18.79■□□□□ 0.6
SMARCA4-203ENST00000429416 ADGRF4Q8IZF3 695 aa18.79■□□□□ 0.6
SMARCA4-203ENST00000429416 GIMAP8Q8ND71 665 aaPredicted RBP18.79■□□□□ 0.6
SMARCA4-203ENST00000429416 NEDD1Q8NHV4 660 aa18.79■□□□□ 0.6
SMARCA4-203ENST00000429416 AK8Q96MA6 479 aa18.79■□□□□ 0.6
SMARCA4-203ENST00000429416 POLLQ9UGP5 575 aa18.79■□□□□ 0.6
SMARCA4-203ENST00000429416 CETPP11597 493 aa18.79■□□□□ 0.6
SMARCA4-203ENST00000429416 KRBA2Q6ZNG9 492 aa18.79■□□□□ 0.6
SMARCA4-203ENST00000429416 SPATA33Q96N06 139 aa18.79■□□□□ 0.6
SMARCA4-203ENST00000429416 RSRC2Q7L4I2 434 aaKnown RBP18.79■□□□□ 0.6
SMARCA4-203ENST00000429416 MTERF4Q7Z6M4 381 aaKnown RBP18.79■□□□□ 0.6
SMARCA4-203ENST00000429416 RGS12O14924 1447 aa18.79■□□□□ 0.6
SMARCA4-203ENST00000429416 KLRK1P26718 216 aa18.78■□□□□ 0.6
SMARCA4-203ENST00000429416 LDHDQ86WU2 507 aa18.78■□□□□ 0.6
SMARCA4-203ENST00000429416 C19orf81C9J6K1 198 aa18.78■□□□□ 0.6
SMARCA4-203ENST00000429416 STAT1P42224 750 aa18.78■□□□□ 0.6
SMARCA4-203ENST00000429416 PPP2R5DQ14738 602 aa18.78■□□□□ 0.6
SMARCA4-203ENST00000429416 ACCSQ96QU6 501 aa18.78■□□□□ 0.6
SMARCA4-203ENST00000429416 BCORL1Q5H9F3 1711 aa18.78■□□□□ 0.6
SMARCA4-203ENST00000429416 LRRIQ1Q96JM4 1722 aa18.78■□□□□ 0.6
SMARCA4-203ENST00000429416 ASB14A6NK59 587 aa18.78■□□□□ 0.6
SMARCA4-203ENST00000429416 COPB2P35606 906 aa18.78■□□□□ 0.6
SMARCA4-203ENST00000429416 CCDC155Q8N6L0 562 aa18.78■□□□□ 0.6
SMARCA4-203ENST00000429416 SLC17A8Q8NDX2 589 aa18.78■□□□□ 0.6
SMARCA4-203ENST00000429416 CWC15Q9P013 229 aaKnown RBP18.78■□□□□ 0.6
SMARCA4-203ENST00000429416 POLIQ9UNA4 740 aa18.78■□□□□ 0.6
SMARCA4-203ENST00000429416 DENND3A2RUS2 1198 aa18.78■□□□□ 0.6
SMARCA4-203ENST00000429416 K7ERI5 159 aa18.78■□□□□ 0.6
SMARCA4-203ENST00000429416 KIF23Q02241 960 aaPredicted RBP18.78■□□□□ 0.6
SMARCA4-203ENST00000429416 MAP1SQ66K74 1059 aaPredicted RBP18.78■□□□□ 0.6
SMARCA4-203ENST00000429416 NDUFA8P51970 172 aa18.78■□□□□ 0.6
SMARCA4-203ENST00000429416 TWF2Q6IBS0 349 aaKnown RBP18.78■□□□□ 0.6
SMARCA4-203ENST00000429416 BHMT2Q9H2M3 363 aa18.78■□□□□ 0.6
SMARCA4-203ENST00000429416 N4BP1O75113 896 aaKnown RBP18.77■□□□□ 0.6
SMARCA4-203ENST00000429416 FDX1P10109 184 aa18.77■□□□□ 0.6
SMARCA4-203ENST00000429416 ELF1P32519 619 aa18.77■□□□□ 0.6
SMARCA4-203ENST00000429416 GBP6Q6ZN66 633 aa18.77■□□□□ 0.6
SMARCA4-203ENST00000429416 PIGOQ8TEQ8 1089 aa18.77■□□□□ 0.6
SMARCA4-203ENST00000429416 ZNF668Q96K58 619 aaPredicted RBP18.77■□□□□ 0.6
SMARCA4-203ENST00000429416 CCDC14Q49A88 953 aa18.77■□□□□ 0.6
SMARCA4-203ENST00000429416 PPP1R21Q6ZMI0 780 aa18.77■□□□□ 0.6
SMARCA4-203ENST00000429416 CCDC77Q9BR77 488 aa18.77■□□□□ 0.6
SMARCA4-203ENST00000429416 SNX25Q9H3E2 840 aa18.77■□□□□ 0.6
SMARCA4-203ENST00000429416 KIAA1468Q9P260 1216 aa18.77■□□□□ 0.6
SMARCA4-203ENST00000429416 CLIC2O15247 247 aa18.77■□□□□ 0.6
SMARCA4-203ENST00000429416 GAP43P17677 238 aa18.77■□□□□ 0.6
SMARCA4-203ENST00000429416 MORC3Q14149 939 aa18.77■□□□□ 0.6
SMARCA4-203ENST00000429416 MCM6Q14566 821 aa18.77■□□□□ 0.6
SMARCA4-203ENST00000429416 TSGA10Q9BZW7 698 aa18.77■□□□□ 0.6
SMARCA4-203ENST00000429416 GOLGA6L7A0A1B0GV03 622 aa18.77■□□□□ 0.59
SMARCA4-203ENST00000429416 NDC80O14777 642 aa18.77■□□□□ 0.59
SMARCA4-203ENST00000429416 CCDC63Q8NA47 563 aa18.77■□□□□ 0.59
SMARCA4-203ENST00000429416 ZKSCAN4Q969J2 545 aaPredicted RBP18.77■□□□□ 0.59
SMARCA4-203ENST00000429416 TEX13BQ9BXU2 312 aa18.77■□□□□ 0.59
SMARCA4-203ENST00000429416 NXF1Q9UBU9 619 aaKnown RBP18.77■□□□□ 0.59
SMARCA4-203ENST00000429416 COBLO75128 1261 aa18.76■□□□□ 0.59
SMARCA4-203ENST00000429416 STK10O94804 968 aaKnown RBP18.76■□□□□ 0.59
SMARCA4-203ENST00000429416 C6orf222P0C671 652 aaPredicted RBP18.76■□□□□ 0.59
SMARCA4-203ENST00000429416 JAK3P52333 1124 aa18.76■□□□□ 0.59
SMARCA4-203ENST00000429416 SLC39A14Q15043 492 aa18.76■□□□□ 0.59
SMARCA4-203ENST00000429416 FBXO33Q7Z6M2 555 aa18.76■□□□□ 0.59
SMARCA4-203ENST00000429416 BANK1Q8NDB2 785 aa18.76■□□□□ 0.59
SMARCA4-203ENST00000429416 TDRD7Q8NHU6 1098 aaKnown RBP18.76■□□□□ 0.59
SMARCA4-203ENST00000429416 CBX8Q9HC52 389 aa18.76■□□□□ 0.59
SMARCA4-203ENST00000429416 KCNJ18B7U540 433 aa18.76■□□□□ 0.59
SMARCA4-203ENST00000429416 KCNJ12Q14500 433 aa18.76■□□□□ 0.59
SMARCA4-203ENST00000429416 LONRF3Q496Y0 759 aa18.76■□□□□ 0.59
SMARCA4-203ENST00000429416 METTL14Q9HCE5 456 aaKnown RBP18.76■□□□□ 0.59
SMARCA4-203ENST00000429416 PLSCR1O15162 318 aa18.76■□□□□ 0.59
SMARCA4-203ENST00000429416 MAGEA1P43355 309 aa18.76■□□□□ 0.59
SMARCA4-203ENST00000429416 CYP26C1Q6V0L0 522 aa18.76■□□□□ 0.59
SMARCA4-203ENST00000429416 WDR64B1ANS9 1081 aa18.76■□□□□ 0.59
SMARCA4-203ENST00000429416 ABCB4P21439 1286 aa18.76■□□□□ 0.59
SMARCA4-203ENST00000429416 NR2F2P24468 414 aa18.76■□□□□ 0.59
SMARCA4-203ENST00000429416 CXCL9Q07325 125 aa18.76■□□□□ 0.59
SMARCA4-203ENST00000429416 ERCC5P28715 1186 aaPredicted RBP18.76■□□□□ 0.59
SMARCA4-203ENST00000429416 CACTINQ8WUQ7 758 aaKnown RBP18.76■□□□□ 0.59
SMARCA4-203ENST00000429416 CCDC94Q9BW85 323 aaPredicted RBP18.76■□□□□ 0.59
SMARCA4-203ENST00000429416 TXNP10599 105 aaKnown RBP18.75■□□□□ 0.59
SMARCA4-203ENST00000429416 TYW1BQ6NUM6 668 aa18.75■□□□□ 0.59
SMARCA4-203ENST00000429416 FAM167AQ96KS9 214 aa18.75■□□□□ 0.59
SMARCA4-203ENST00000429416 PARVGQ9HBI0 331 aa18.75■□□□□ 0.59
SMARCA4-203ENST00000429416 PCDHB6Q9Y5E3 794 aa18.75■□□□□ 0.59
SMARCA4-203ENST00000429416 PLA2G4BP0C869 781 aa18.75■□□□□ 0.59
SMARCA4-203ENST00000429416 CALCOCO2Q13137 446 aa18.75■□□□□ 0.59
SMARCA4-203ENST00000429416 TTBK2Q6IQ55 1244 aa18.75■□□□□ 0.59
SMARCA4-203ENST00000429416 SND1Q7KZF4 910 aaKnown RBP eCLIP18.75■□□□□ 0.59
SMARCA4-203ENST00000429416 THNSL1Q8IYQ7 743 aa18.75■□□□□ 0.59
SMARCA4-203ENST00000429416 SREK1Q8WXA9 508 aaKnown RBP18.75■□□□□ 0.59
SMARCA4-203ENST00000429416 PAIP2Q9BPZ3 127 aaKnown RBP18.75■□□□□ 0.59
SMARCA4-203ENST00000429416 PEX3P56589 373 aa18.75■□□□□ 0.59
SMARCA4-203ENST00000429416 U2AF1L4Q8WU68 220 aaKnown RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms