RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 SCRN1Q12765 414 aa13.91□□□□□ -0.18
LDB3-205ENST00000429277 ZNF658Q5TYW1 1059 aaPredicted RBP13.91□□□□□ -0.18
LDB3-205ENST00000429277 JADE1Q6IE81 842 aa13.91□□□□□ -0.18
LDB3-205ENST00000429277 DPH5Q9H2P9 285 aa13.91□□□□□ -0.18
LDB3-205ENST00000429277 SEPT9Q9UHD8 586 aaPredicted RBP13.91□□□□□ -0.18
LDB3-205ENST00000429277 SART1O43290 800 aaKnown RBP13.9□□□□□ -0.18
LDB3-205ENST00000429277 CCND2P30279 289 aa13.9□□□□□ -0.18
LDB3-205ENST00000429277 CRKLP46109 303 aaKnown RBP13.9□□□□□ -0.18
LDB3-205ENST00000429277 ZSCAN26Q16670 478 aa13.9□□□□□ -0.18
LDB3-205ENST00000429277 USPL1Q5W0Q7 1092 aa13.9□□□□□ -0.18
LDB3-205ENST00000429277 DPP9Q86TI2 863 aa13.9□□□□□ -0.18
LDB3-205ENST00000429277 DISC1Q9NRI5 854 aa13.9□□□□□ -0.18
LDB3-205ENST00000429277 PPP4R3CPQ6ZMV5 832 aa13.9□□□□□ -0.18
LDB3-205ENST00000429277 KMT5AQ9NQR1 393 aa13.9□□□□□ -0.18
LDB3-205ENST00000429277 SEPT10Q9P0V9 454 aa13.9□□□□□ -0.18
LDB3-205ENST00000429277 PPFIA2O75334 1257 aa13.9□□□□□ -0.18
LDB3-205ENST00000429277 ABL1P00519 1130 aa13.9□□□□□ -0.18
LDB3-205ENST00000429277 ECE1P42892 770 aa13.9□□□□□ -0.18
LDB3-205ENST00000429277 EPHB4P54760 987 aa13.9□□□□□ -0.18
LDB3-205ENST00000429277 STX1BP61266 288 aa13.9□□□□□ -0.18
LDB3-205ENST00000429277 YWHAGP61981 247 aaKnown RBP eCLIP13.9□□□□□ -0.18
LDB3-205ENST00000429277 PDE1BQ01064 536 aa13.9□□□□□ -0.18
LDB3-205ENST00000429277 GPR162Q16538 588 aa13.9□□□□□ -0.18
LDB3-205ENST00000429277 UIMC1Q96RL1 719 aa13.9□□□□□ -0.18
LDB3-205ENST00000429277 DESI2Q9BSY9 194 aa13.9□□□□□ -0.18
LDB3-205ENST00000429277 LCMT1Q9UIC8 334 aa13.9□□□□□ -0.18
LDB3-205ENST00000429277 SERPINB13Q9UIV8 391 aa13.9□□□□□ -0.18
LDB3-205ENST00000429277 CARMIL3Q8ND23 1372 aa13.9□□□□□ -0.18
LDB3-205ENST00000429277 HGSO14964 777 aaPredicted RBP13.9□□□□□ -0.18
LDB3-205ENST00000429277 LUC7L3O95232 432 aaKnown RBP13.9□□□□□ -0.18
LDB3-205ENST00000429277 SLFN14P0C7P3 912 aa13.9□□□□□ -0.18
LDB3-205ENST00000429277 SETSIPP0DME0 302 aa13.9□□□□□ -0.18
LDB3-205ENST00000429277 XPAP23025 273 aaPredicted RBP13.9□□□□□ -0.18
LDB3-205ENST00000429277 DOK7Q18PE1 504 aa13.9□□□□□ -0.18
LDB3-205ENST00000429277 PBKQ96KB5 322 aa13.9□□□□□ -0.18
LDB3-205ENST00000429277 SNX25Q9H3E2 840 aa13.9□□□□□ -0.18
LDB3-205ENST00000429277 MAD1L1Q9Y6D9 718 aa13.9□□□□□ -0.18
LDB3-205ENST00000429277 ABCA5Q8WWZ7 1642 aa13.9□□□□□ -0.18
LDB3-205ENST00000429277 FAM196AQ6ZSG2 479 aa13.89□□□□□ -0.19
LDB3-205ENST00000429277 RFX6Q8HWS3 928 aa13.89□□□□□ -0.19
LDB3-205ENST00000429277 CMTR1Q8N1G2 835 aaKnown RBP13.89□□□□□ -0.19
LDB3-205ENST00000429277 TUBB6Q9BUF5 446 aa13.89□□□□□ -0.19
LDB3-205ENST00000429277 PCDHA5Q9Y5H7 936 aa13.89□□□□□ -0.19
LDB3-205ENST00000429277 BMP3P12645 472 aa13.89□□□□□ -0.19
LDB3-205ENST00000429277 ARL4AP40617 200 aa13.89□□□□□ -0.19
LDB3-205ENST00000429277 MAGOHBQ96A72 148 aaKnown RBP13.89□□□□□ -0.19
LDB3-205ENST00000429277 HDAC11Q96DB2 347 aa13.89□□□□□ -0.19
LDB3-205ENST00000429277 MAPK4P31152 587 aa13.89□□□□□ -0.19
LDB3-205ENST00000429277 ADD2P35612 726 aa13.89□□□□□ -0.19
LDB3-205ENST00000429277 MCF2LO15068 1137 aa13.89□□□□□ -0.19
LDB3-205ENST00000429277 IFNAR1P17181 557 aa13.89□□□□□ -0.19
LDB3-205ENST00000429277 NFKBIAP25963 317 aa13.89□□□□□ -0.19
LDB3-205ENST00000429277 RSRC2Q7L4I2 434 aaKnown RBP13.89□□□□□ -0.19
LDB3-205ENST00000429277 NLRP7Q8WX94 980 aa13.89□□□□□ -0.19
LDB3-205ENST00000429277 CALR3Q96L12 384 aaKnown RBP13.89□□□□□ -0.19
LDB3-205ENST00000429277 LRGUKQ96M69 825 aa13.89□□□□□ -0.19
LDB3-205ENST00000429277 DONSONQ9NYP3 566 aa13.89□□□□□ -0.19
LDB3-205ENST00000429277 ZNF215Q9UL58 517 aaPredicted RBP13.89□□□□□ -0.19
LDB3-205ENST00000429277 DAAM1Q9Y4D1 1078 aa13.89□□□□□ -0.19
LDB3-205ENST00000429277 CLIC4Q9Y696 253 aa13.89□□□□□ -0.19
LDB3-205ENST00000429277 PGRMC1O00264 195 aaKnown RBP13.89□□□□□ -0.19
LDB3-205ENST00000429277 VPS41P49754 854 aa13.89□□□□□ -0.19
LDB3-205ENST00000429277 CYP4A11Q02928 519 aa13.89□□□□□ -0.19
LDB3-205ENST00000429277 MMEL1Q495T6 779 aa13.89□□□□□ -0.19
LDB3-205ENST00000429277 ELMSAN1Q6PJG2 1045 aa13.89□□□□□ -0.19
LDB3-205ENST00000429277 THAP9Q9H5L6 903 aa13.89□□□□□ -0.19
LDB3-205ENST00000429277 BCL2L12Q9HB09 334 aa13.89□□□□□ -0.19
LDB3-205ENST00000429277 THEGQ9P2T0 379 aa13.89□□□□□ -0.19
LDB3-205ENST00000429277 IGSF1Q8N6C5 1336 aa13.88□□□□□ -0.19
LDB3-205ENST00000429277 TTI1O43156 1089 aa13.88□□□□□ -0.19
LDB3-205ENST00000429277 ZNF653Q96CK0 615 aa13.88□□□□□ -0.19
LDB3-205ENST00000429277 DBNLQ9UJU6 430 aaKnown RBP13.88□□□□□ -0.19
LDB3-205ENST00000429277 PRPF3O43395 683 aaKnown RBP13.88□□□□□ -0.19
LDB3-205ENST00000429277 MYO1EQ12965 1108 aa13.88□□□□□ -0.19
LDB3-205ENST00000429277 ZNF827Q17R98 1081 aa13.88□□□□□ -0.19
LDB3-205ENST00000429277 HSP90AA5PQ58FG0 334 aa13.88□□□□□ -0.19
LDB3-205ENST00000429277 SRRM1Q8IYB3 904 aaKnown RBP13.88□□□□□ -0.19
LDB3-205ENST00000429277 CFAP61Q8NHU2 1237 aa13.88□□□□□ -0.19
LDB3-205ENST00000429277 ZC3H15Q8WU90 426 aaKnown RBP13.88□□□□□ -0.19
LDB3-205ENST00000429277 CLIC6Q96NY7 704 aa13.88□□□□□ -0.19
LDB3-205ENST00000429277 RWDD2AQ9UIY3 292 aa13.88□□□□□ -0.19
LDB3-205ENST00000429277 IGSF3O75054 1194 aa13.88□□□□□ -0.19
LDB3-205ENST00000429277 EHHADHQ08426 723 aa13.88□□□□□ -0.19
LDB3-205ENST00000429277 C17orf53Q8N3J3 647 aaPredicted RBP13.88□□□□□ -0.19
LDB3-205ENST00000429277 KCNQ3O43525 872 aa13.88□□□□□ -0.19
LDB3-205ENST00000429277 HEXIM1O94992 359 aaKnown RBP13.88□□□□□ -0.19
LDB3-205ENST00000429277 STAT2P52630 851 aa13.88□□□□□ -0.19
LDB3-205ENST00000429277 COG7P83436 770 aa13.88□□□□□ -0.19
LDB3-205ENST00000429277 SLMAPQ14BN4 828 aa13.88□□□□□ -0.19
LDB3-205ENST00000429277 ARL6IP4Q66PJ3 421 aaKnown RBP13.88□□□□□ -0.19
LDB3-205ENST00000429277 ARHGAP27Q6ZUM4 889 aa13.88□□□□□ -0.19
LDB3-205ENST00000429277 BZW1Q7L1Q6 419 aaKnown RBP13.88□□□□□ -0.19
LDB3-205ENST00000429277 BCAS4Q8TDM0 211 aa13.88□□□□□ -0.19
LDB3-205ENST00000429277 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.88□□□□□ -0.19
LDB3-205ENST00000429277 EPS15L1Q9UBC2 864 aa13.88□□□□□ -0.19
LDB3-205ENST00000429277 PALD1Q9ULE6 856 aa13.88□□□□□ -0.19
LDB3-205ENST00000429277 ANGPTL3Q9Y5C1 460 aa13.88□□□□□ -0.19
LDB3-205ENST00000429277 ECEL1O95672 775 aa13.87□□□□□ -0.19
LDB3-205ENST00000429277 GUCY2DQ02846 1103 aa13.87□□□□□ -0.19
LDB3-205ENST00000429277 MESDQ14696 234 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms