RNA–Protein interactions for RNA: ENST00000428878.6

HIPK2-203, Transcript of homeodomain interacting protein kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIPK2, Length 3,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK2-203ENST00000428878 PDCL3Q9H2J4 239 aa12.27□□□□□ -0.44
HIPK2-203ENST00000428878 RGL2O15211 777 aa12.27□□□□□ -0.45
HIPK2-203ENST00000428878 PRPF6O94906 941 aaKnown RBP12.27□□□□□ -0.45
HIPK2-203ENST00000428878 VCAM1P19320 739 aa12.27□□□□□ -0.45
HIPK2-203ENST00000428878 EPHX2P34913 555 aa12.27□□□□□ -0.45
HIPK2-203ENST00000428878 METTL13Q8N6R0 699 aa12.27□□□□□ -0.45
HIPK2-203ENST00000428878 TAAR1Q96RJ0 339 aa12.27□□□□□ -0.45
HIPK2-203ENST00000428878 PANK4Q9NVE7 773 aa12.27□□□□□ -0.45
HIPK2-203ENST00000428878 ZNHIT6Q9NWK9 470 aaKnown RBP12.27□□□□□ -0.45
HIPK2-203ENST00000428878 ZKSCAN5Q9Y2L8 839 aa12.27□□□□□ -0.45
HIPK2-203ENST00000428878 RAPGEF1Q13905 1077 aa12.27□□□□□ -0.45
HIPK2-203ENST00000428878 DDX12PQ92771 950 aa12.27□□□□□ -0.45
HIPK2-203ENST00000428878 DYDC2Q96IM9 177 aa12.27□□□□□ -0.45
HIPK2-203ENST00000428878 ZMYND12Q9H0C1 365 aa12.27□□□□□ -0.45
HIPK2-203ENST00000428878 CNGA1P29973 690 aa12.26□□□□□ -0.45
HIPK2-203ENST00000428878 RPS6P62753 249 aaKnown RBP12.26□□□□□ -0.45
HIPK2-203ENST00000428878 NOLC1Q14978 699 aaKnown RBP eCLIP12.26□□□□□ -0.45
HIPK2-203ENST00000428878 HAUS3Q68CZ6 603 aa12.26□□□□□ -0.45
HIPK2-203ENST00000428878 ENGASEQ8NFI3 743 aa12.26□□□□□ -0.45
HIPK2-203ENST00000428878 MLXIPQ9HAP2 919 aa12.26□□□□□ -0.45
HIPK2-203ENST00000428878 GPRC5DQ9NZD1 345 aa12.26□□□□□ -0.45
HIPK2-203ENST00000428878 URI1O94763 535 aaPredicted RBP12.26□□□□□ -0.45
HIPK2-203ENST00000428878 HDLBPQ00341 1268 aaKnown RBP12.26□□□□□ -0.45
HIPK2-203ENST00000428878 GABPAQ06546 454 aa12.26□□□□□ -0.45
HIPK2-203ENST00000428878 ARHGAP29Q52LW3 1261 aa12.26□□□□□ -0.45
HIPK2-203ENST00000428878 DPH6Q7L8W6 267 aa12.26□□□□□ -0.45
HIPK2-203ENST00000428878 CCDC144BQ3MJ40 725 aa12.26□□□□□ -0.45
HIPK2-203ENST00000428878 KIAA1328Q86T90 577 aa12.26□□□□□ -0.45
HIPK2-203ENST00000428878 CCDC65Q8IXS2 484 aa12.26□□□□□ -0.45
HIPK2-203ENST00000428878 MLKLQ8NB16 471 aa12.26□□□□□ -0.45
HIPK2-203ENST00000428878 PDS5AQ29RF7 1337 aaKnown RBP12.25□□□□□ -0.45
HIPK2-203ENST00000428878 POTEB2H3BUK9 544 aa12.25□□□□□ -0.45
HIPK2-203ENST00000428878 CYP2C8P10632 490 aa12.25□□□□□ -0.45
HIPK2-203ENST00000428878 PRCPP42785 496 aa12.25□□□□□ -0.45
HIPK2-203ENST00000428878 MORC3Q14149 939 aa12.25□□□□□ -0.45
HIPK2-203ENST00000428878 PTPN14Q15678 1187 aa12.25□□□□□ -0.45
HIPK2-203ENST00000428878 APOBEC3FQ8IUX4 373 aaKnown RBP12.25□□□□□ -0.45
HIPK2-203ENST00000428878 CACTINQ8WUQ7 758 aaKnown RBP12.25□□□□□ -0.45
HIPK2-203ENST00000428878 RIC8AQ9NPQ8 531 aa12.25□□□□□ -0.45
HIPK2-203ENST00000428878 MYO5AQ9Y4I1 1855 aaKnown RBP12.25□□□□□ -0.45
HIPK2-203ENST00000428878 CELF2O95319 508 aaKnown RBP12.25□□□□□ -0.45
HIPK2-203ENST00000428878 PLA2G4BP0C869 781 aa12.25□□□□□ -0.45
HIPK2-203ENST00000428878 MTERF2Q49AM1 385 aa12.25□□□□□ -0.45
HIPK2-203ENST00000428878 GRIPAP1Q4V328 841 aa12.25□□□□□ -0.45
HIPK2-203ENST00000428878 CCDC127Q96BQ5 260 aa12.25□□□□□ -0.45
HIPK2-203ENST00000428878 USP20Q9Y2K6 914 aa12.25□□□□□ -0.45
HIPK2-203ENST00000428878 RABGAP1Q9Y3P9 1069 aa12.25□□□□□ -0.45
HIPK2-203ENST00000428878 BCORQ6W2J9 1755 aa12.25□□□□□ -0.45
HIPK2-203ENST00000428878 B4DLN1 442 aa12.25□□□□□ -0.45
HIPK2-203ENST00000428878 TEX33O43247 280 aa12.25□□□□□ -0.45
HIPK2-203ENST00000428878 GTPBP6O43824 516 aaPredicted RBP12.25□□□□□ -0.45
HIPK2-203ENST00000428878 TRAPPC10P48553 1259 aa12.25□□□□□ -0.45
HIPK2-203ENST00000428878 MUM1L1Q5H9M0 696 aa12.25□□□□□ -0.45
HIPK2-203ENST00000428878 DPP9Q86TI2 863 aa12.25□□□□□ -0.45
HIPK2-203ENST00000428878 WNK4Q96J92 1243 aa12.25□□□□□ -0.45
HIPK2-203ENST00000428878 PKNOX2Q96KN3 472 aa12.25□□□□□ -0.45
HIPK2-203ENST00000428878 WDR11Q9BZH6 1224 aa12.25□□□□□ -0.45
HIPK2-203ENST00000428878 ARP10275 920 aa12.24□□□□□ -0.45
HIPK2-203ENST00000428878 MTMR1Q13613 665 aa12.24□□□□□ -0.45
HIPK2-203ENST00000428878 FAM26FQ5R3K3 315 aa12.24□□□□□ -0.45
HIPK2-203ENST00000428878 ODR4Q5SWX8 454 aa12.24□□□□□ -0.45
HIPK2-203ENST00000428878 GALNT17Q6IS24 598 aa12.24□□□□□ -0.45
HIPK2-203ENST00000428878 PSMB7Q99436 277 aa12.24□□□□□ -0.45
HIPK2-203ENST00000428878 MTA3Q9BTC8 594 aa12.24□□□□□ -0.45
HIPK2-203ENST00000428878 PUF60Q9UHX1 559 aaKnown RBP12.24□□□□□ -0.45
HIPK2-203ENST00000428878 IPO5O00410 1097 aaKnown RBP12.24□□□□□ -0.45
HIPK2-203ENST00000428878 YBX3P16989 372 aaKnown RBP eCLIP12.24□□□□□ -0.455e-9■■□□□ 14.4
HIPK2-203ENST00000428878 CYFIP1Q7L576 1253 aa12.24□□□□□ -0.45
HIPK2-203ENST00000428878 HINFPQ9BQA5 517 aa12.24□□□□□ -0.45
HIPK2-203ENST00000428878 SEPT9Q9UHD8 586 aaPredicted RBP12.24□□□□□ -0.45
HIPK2-203ENST00000428878 ZHX1Q9UKY1 873 aaPredicted RBP12.24□□□□□ -0.45
HIPK2-203ENST00000428878 LAMB2P55268 1798 aa12.24□□□□□ -0.45
HIPK2-203ENST00000428878 GOLGA8IPA6NC78 632 aa12.24□□□□□ -0.45
HIPK2-203ENST00000428878 GOLGA8JA6NMD2 632 aa12.24□□□□□ -0.45
HIPK2-203ENST00000428878 IRF6O14896 467 aa12.24□□□□□ -0.45
HIPK2-203ENST00000428878 STK4Q13043 487 aa12.24□□□□□ -0.45
HIPK2-203ENST00000428878 ARMC9Q7Z3E5 817 aa12.24□□□□□ -0.45
HIPK2-203ENST00000428878 DNAI1Q9UI46 699 aa12.24□□□□□ -0.45
HIPK2-203ENST00000428878 TMX2Q9Y320 296 aa12.24□□□□□ -0.45
HIPK2-203ENST00000428878 TMCO5BA8MYB1 307 aa12.23□□□□□ -0.45
HIPK2-203ENST00000428878 KCNJ18B7U540 433 aa12.23□□□□□ -0.45
HIPK2-203ENST00000428878 USP14P54578 494 aa12.23□□□□□ -0.45
HIPK2-203ENST00000428878 SOX10P56693 466 aa12.23□□□□□ -0.45
HIPK2-203ENST00000428878 PSMC6P62333 389 aa12.23□□□□□ -0.45
HIPK2-203ENST00000428878 KCNJ12Q14500 433 aa12.23□□□□□ -0.45
HIPK2-203ENST00000428878 KCTD2Q14681 263 aa12.23□□□□□ -0.45
HIPK2-203ENST00000428878 IL17AQ16552 155 aa12.23□□□□□ -0.45
HIPK2-203ENST00000428878 MNS1Q8NEH6 495 aa12.23□□□□□ -0.45
HIPK2-203ENST00000428878 TEKT3Q9BXF9 490 aa12.23□□□□□ -0.45
HIPK2-203ENST00000428878 RIOX1Q9H6W3 641 aa12.23□□□□□ -0.45
HIPK2-203ENST00000428878 FEM1BQ9UK73 627 aa12.23□□□□□ -0.45
HIPK2-203ENST00000428878 GNG11P61952 73 aa12.23□□□□□ -0.45
HIPK2-203ENST00000428878 TRAF1Q13077 416 aa12.23□□□□□ -0.45
HIPK2-203ENST00000428878 VGLL4Q14135 290 aa12.23□□□□□ -0.45
HIPK2-203ENST00000428878 PLA2G4FQ68DD2 849 aa12.23□□□□□ -0.45
HIPK2-203ENST00000428878 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.23□□□□□ -0.45
HIPK2-203ENST00000428878 ANKRD13CQ8N6S4 541 aa12.23□□□□□ -0.45
HIPK2-203ENST00000428878 SPAG5Q96R06 1193 aa12.23□□□□□ -0.45
HIPK2-203ENST00000428878 NHSQ6T4R5 1651 aa12.23□□□□□ -0.45
HIPK2-203ENST00000428878 UQCRHLA0A096LP55 91 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms