RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 MEIS2O14770 477 aa22.15■■□□□ 1.14
COL9A2-204ENST00000427563 EIF3JO75822 258 aaKnown RBP22.15■■□□□ 1.14
COL9A2-204ENST00000427563 MYL3P08590 195 aa22.15■■□□□ 1.14
COL9A2-204ENST00000427563 CPT1AP50416 773 aa22.15■■□□□ 1.14
COL9A2-204ENST00000427563 KRT32Q14532 448 aa22.15■■□□□ 1.14
COL9A2-204ENST00000427563 SHHQ15465 462 aa22.15■■□□□ 1.14
COL9A2-204ENST00000427563 VSIG10LQ86VR7 867 aa22.15■■□□□ 1.14
COL9A2-204ENST00000427563 CCDC82Q8N4S0 544 aa22.15■■□□□ 1.14
COL9A2-204ENST00000427563 GPKOWQ92917 476 aaPredicted RBP eCLIP22.15■■□□□ 1.14
COL9A2-204ENST00000427563 DDX41Q9UJV9 622 aaKnown RBP22.15■■□□□ 1.14
COL9A2-204ENST00000427563 DOCK5Q9H7D0 1870 aa22.15■■□□□ 1.14
COL9A2-204ENST00000427563 MYCLP12524 364 aaPredicted RBP22.14■■□□□ 1.13
COL9A2-204ENST00000427563 RAG1P15918 1043 aa22.14■■□□□ 1.13
COL9A2-204ENST00000427563 TRAF1Q13077 416 aa22.14■■□□□ 1.13
COL9A2-204ENST00000427563 USP17L6PQ6QN14 398 aa22.14■■□□□ 1.13
COL9A2-204ENST00000427563 AFG1LQ8WV93 481 aa22.14■■□□□ 1.13
COL9A2-204ENST00000427563 JAKMIP1Q96N16 626 aaKnown RBP22.14■■□□□ 1.13
COL9A2-204ENST00000427563 POLR3EQ9NVU0 708 aa22.14■■□□□ 1.13
COL9A2-204ENST00000427563 B4GALT4O60513 344 aa22.13■■□□□ 1.13
COL9A2-204ENST00000427563 TIMP1P01033 207 aa22.13■■□□□ 1.13
COL9A2-204ENST00000427563 CDC27P30260 824 aa22.13■■□□□ 1.13
COL9A2-204ENST00000427563 MRPS9P82933 396 aaKnown RBP22.13■■□□□ 1.13
COL9A2-204ENST00000427563 TRPV6Q9H1D0 765 aa22.13■■□□□ 1.13
COL9A2-204ENST00000427563 UMODL1Q5DID0 1318 aa22.12■■□□□ 1.13
COL9A2-204ENST00000427563 KLF18A0A0U1RQI7 1052 aa22.12■■□□□ 1.13
COL9A2-204ENST00000427563 GH1P01241 217 aa22.12■■□□□ 1.13
COL9A2-204ENST00000427563 MMP3P08254 477 aa22.12■■□□□ 1.13
COL9A2-204ENST00000427563 SP2Q02086 613 aa22.12■■□□□ 1.13
COL9A2-204ENST00000427563 TYW1BQ6NUM6 668 aa22.12■■□□□ 1.13
COL9A2-204ENST00000427563 MTG1Q9BT17 334 aaPredicted RBP22.12■■□□□ 1.13
COL9A2-204ENST00000427563 BCAS3Q9H6U6 928 aa22.12■■□□□ 1.13
COL9A2-204ENST00000427563 SEC63Q9UGP8 760 aaKnown RBP22.12■■□□□ 1.13
COL9A2-204ENST00000427563 PIK3CDO00329 1044 aa22.11■■□□□ 1.13
COL9A2-204ENST00000427563 ZBTB43O43298 467 aa22.11■■□□□ 1.13
COL9A2-204ENST00000427563 APOBRQ0VD83 1088 aa22.11■■□□□ 1.13
COL9A2-204ENST00000427563 SEMA3FQ13275 785 aa22.11■■□□□ 1.13
COL9A2-204ENST00000427563 RTN1Q16799 776 aa22.11■■□□□ 1.13
COL9A2-204ENST00000427563 NBPF20Q3BBV1 942 aa22.11■■□□□ 1.13
COL9A2-204ENST00000427563 Q6ZUG5 572 aa22.11■■□□□ 1.13
COL9A2-204ENST00000427563 KAT2BQ92831 832 aa22.11■■□□□ 1.13
COL9A2-204ENST00000427563 PPP1R12CQ9BZL4 782 aa22.11■■□□□ 1.13
COL9A2-204ENST00000427563 ALDH8A1Q9H2A2 487 aaPredicted RBP22.11■■□□□ 1.13
COL9A2-204ENST00000427563 MRVI1Q9Y6F6 885 aa22.11■■□□□ 1.13
COL9A2-204ENST00000427563 TLR3O15455 904 aaKnown RBP22.1■■□□□ 1.13
COL9A2-204ENST00000427563 REC8O95072 547 aa22.1■■□□□ 1.13
COL9A2-204ENST00000427563 HMGB1P09429 215 aaKnown RBP22.1■■□□□ 1.13
COL9A2-204ENST00000427563 CCND2P30279 289 aa22.1■■□□□ 1.13
COL9A2-204ENST00000427563 WWC2Q6AWC2 1192 aa22.1■■□□□ 1.13
COL9A2-204ENST00000427563 MFSD5Q6N075 450 aa22.1■■□□□ 1.13
COL9A2-204ENST00000427563 C16orf59Q7L2K0 433 aa22.1■■□□□ 1.13
COL9A2-204ENST00000427563 EMID1Q96A84 441 aaPredicted RBP22.1■■□□□ 1.13
COL9A2-204ENST00000427563 USP26Q9BXU7 913 aa22.1■■□□□ 1.13
COL9A2-204ENST00000427563 AGXT2Q9BYV1 514 aa22.1■■□□□ 1.13
COL9A2-204ENST00000427563 TRMT13Q9NUP7 481 aaKnown RBP22.1■■□□□ 1.13
COL9A2-204ENST00000427563 GOLGA8AA7E2F4 631 aa22.09■■□□□ 1.13
COL9A2-204ENST00000427563 GOLGA8BA8MQT2 603 aa22.09■■□□□ 1.13
COL9A2-204ENST00000427563 SORBS3O60504 671 aa22.09■■□□□ 1.13
COL9A2-204ENST00000427563 UBA1P22314 1058 aaKnown RBP22.09■■□□□ 1.13
COL9A2-204ENST00000427563 RPS6KB1P23443 525 aa22.09■■□□□ 1.13
COL9A2-204ENST00000427563 CYP2C18P33260 490 aa22.09■■□□□ 1.13
COL9A2-204ENST00000427563 FPGSQ05932 587 aa22.09■■□□□ 1.13
COL9A2-204ENST00000427563 UBE2SQ16763 222 aa22.09■■□□□ 1.13
COL9A2-204ENST00000427563 BLOC1S2Q6QNY1 142 aa22.09■■□□□ 1.13
COL9A2-204ENST00000427563 SYNE3Q6ZMZ3 975 aa22.09■■□□□ 1.13
COL9A2-204ENST00000427563 RBM28Q9NW13 759 aaKnown RBP22.09■■□□□ 1.13
COL9A2-204ENST00000427563 MYSM1Q5VVJ2 828 aa22.08■■□□□ 1.13
COL9A2-204ENST00000427563 FBXL16Q8N461 479 aa22.08■■□□□ 1.13
COL9A2-204ENST00000427563 SMARCC2Q8TAQ2 1214 aa22.08■■□□□ 1.13
COL9A2-204ENST00000427563 BRF1Q92994 677 aa22.08■■□□□ 1.13
COL9A2-204ENST00000427563 VWCEQ96DN2 955 aa22.08■■□□□ 1.13
COL9A2-204ENST00000427563 INPP4AQ96PE3 977 aaPredicted RBP22.08■■□□□ 1.13
COL9A2-204ENST00000427563 NOC4LQ9BVI4 516 aaKnown RBP22.08■■□□□ 1.13
COL9A2-204ENST00000427563 SEZ6LQ9BYH1 1024 aa22.08■■□□□ 1.13
COL9A2-204ENST00000427563 WNT8AQ9H1J5 351 aa22.08■■□□□ 1.13
COL9A2-204ENST00000427563 NID2Q14112 1375 aa22.08■■□□□ 1.12
COL9A2-204ENST00000427563 SCN5AQ14524 2016 aa22.07■■□□□ 1.12
COL9A2-204ENST00000427563 KPNA6O60684 536 aa22.07■■□□□ 1.12
COL9A2-204ENST00000427563 HOXD8P13378 290 aaPredicted RBP22.07■■□□□ 1.12
COL9A2-204ENST00000427563 CSF2RAP15509 400 aa22.07■■□□□ 1.12
COL9A2-204ENST00000427563 ADD1P35611 737 aaKnown RBP22.07■■□□□ 1.12
COL9A2-204ENST00000427563 RCAN1P53805 252 aa22.07■■□□□ 1.12
COL9A2-204ENST00000427563 HSDL1Q3SXM5 330 aa22.07■■□□□ 1.12
COL9A2-204ENST00000427563 BRDTQ58F21 947 aaPredicted RBP22.07■■□□□ 1.12
COL9A2-204ENST00000427563 CELF3Q5SZQ8 465 aaKnown RBP22.07■■□□□ 1.12
COL9A2-204ENST00000427563 HEATR3Q7Z4Q2 680 aa22.07■■□□□ 1.12
COL9A2-204ENST00000427563 CTAGE1Q96RT6 745 aa22.07■■□□□ 1.12
COL9A2-204ENST00000427563 PSTPIP2Q9H939 334 aa22.07■■□□□ 1.12
COL9A2-204ENST00000427563 RTEL1Q9NZ71 1219 aa22.07■■□□□ 1.12
COL9A2-204ENST00000427563 TELO2Q9Y4R8 837 aa22.07■■□□□ 1.12
COL9A2-204ENST00000427563 EPB41L2O43491 1005 aaKnown RBP22.06■■□□□ 1.12
COL9A2-204ENST00000427563 GGPS1O95749 300 aa22.06■■□□□ 1.12
COL9A2-204ENST00000427563 CYP2C9P11712 490 aa22.06■■□□□ 1.12
COL9A2-204ENST00000427563 CASTP20810 708 aaKnown RBP22.06■■□□□ 1.12
COL9A2-204ENST00000427563 ICAM3P32942 547 aa22.06■■□□□ 1.12
COL9A2-204ENST00000427563 LAMC2Q13753 1193 aa22.06■■□□□ 1.12
COL9A2-204ENST00000427563 NFRKBQ6P4R8 1299 aa22.06■■□□□ 1.12
COL9A2-204ENST00000427563 Q7L0L9 218 aa22.06■■□□□ 1.12
COL9A2-204ENST00000427563 DHX37Q8IY37 1157 aaKnown RBP22.06■■□□□ 1.12
COL9A2-204ENST00000427563 PPTC7Q8NI37 304 aa22.06■■□□□ 1.12
COL9A2-204ENST00000427563 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.06■■□□□ 1.125e-8■■■□□ 16.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms