RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 ARHGAP1Q07960 439 aa21.28■■□□□ 1
GPC1-205ENST00000427506 DHX32Q7L7V1 743 aaKnown RBP21.28■■□□□ 1
GPC1-205ENST00000427506 SGMS1Q86VZ5 419 aa21.28■■□□□ 1
GPC1-205ENST00000427506 RASEFQ8IZ41 740 aa21.28■■□□□ 1
GPC1-205ENST00000427506 CCDC82Q8N4S0 544 aa21.28■■□□□ 1
GPC1-205ENST00000427506 FANCBQ8NB91 859 aa21.28■■□□□ 1
GPC1-205ENST00000427506 CUL5Q93034 780 aa21.28■■□□□ 1
GPC1-205ENST00000427506 TCEANC2Q96MN5 208 aa21.28■■□□□ 1
GPC1-205ENST00000427506 ALDH8A1Q9H2A2 487 aaPredicted RBP21.28■■□□□ 1
GPC1-205ENST00000427506 DDX41Q9UJV9 622 aaKnown RBP21.28■■□□□ 1
GPC1-205ENST00000427506 MMP3P08254 477 aa21.27■■□□□ 1
GPC1-205ENST00000427506 SUPT20HL2P0C7V6 817 aa21.27■■□□□ 1
GPC1-205ENST00000427506 CSF2RAP15509 400 aa21.27■■□□□ 1
GPC1-205ENST00000427506 CYP2C18P33260 490 aa21.27■■□□□ 1
GPC1-205ENST00000427506 NBPF20Q3BBV1 942 aa21.27■■□□□ 1
GPC1-205ENST00000427506 ADCK5Q3MIX3 580 aa21.27■■□□□ 1
GPC1-205ENST00000427506 TSGA10IPQ3SY00 556 aa21.27■■□□□ 1
GPC1-205ENST00000427506 VSIG10LQ86VR7 867 aa21.27■■□□□ 1
GPC1-205ENST00000427506 DHX37Q8IY37 1157 aaKnown RBP21.27■■□□□ 1
GPC1-205ENST00000427506 SMARCC2Q8TAQ2 1214 aa21.27■■□□□ 1
GPC1-205ENST00000427506 BAZ2BQ9UIF8 2168 aaKnown RBP21.26■□□□□ 0.99
GPC1-205ENST00000427506 CASTP20810 708 aaKnown RBP21.26■□□□□ 0.99
GPC1-205ENST00000427506 FGD1P98174 961 aa21.26■□□□□ 0.99
GPC1-205ENST00000427506 EXOSC10Q01780 885 aaKnown RBP21.26■□□□□ 0.99
GPC1-205ENST00000427506 KCNV1Q6PIU1 500 aa21.26■□□□□ 0.99
GPC1-205ENST00000427506 IL31RAQ8NI17 732 aa21.26■□□□□ 0.99
GPC1-205ENST00000427506 PPP1R13LQ8WUF5 828 aa21.26■□□□□ 0.99
GPC1-205ENST00000427506 ZFP91Q96JP5 570 aaPredicted RBP21.26■□□□□ 0.99
GPC1-205ENST00000427506 TRMT13Q9NUP7 481 aaKnown RBP21.26■□□□□ 0.99
GPC1-205ENST00000427506 hCG_1642624A0A1W2PR95 340 aa21.25■□□□□ 0.99
GPC1-205ENST00000427506 HMGB1P09429 215 aaKnown RBP21.25■□□□□ 0.99
GPC1-205ENST00000427506 CCL23P55773 120 aa21.25■□□□□ 0.99
GPC1-205ENST00000427506 LAMC2Q13753 1193 aa21.25■□□□□ 0.99
GPC1-205ENST00000427506 APOA5Q6Q788 366 aa21.25■□□□□ 0.99
GPC1-205ENST00000427506 TMTC3Q6ZXV5 915 aa21.25■□□□□ 0.99
GPC1-205ENST00000427506 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.25■□□□□ 0.99
GPC1-205ENST00000427506 SORBS3O60504 671 aa21.24■□□□□ 0.99
GPC1-205ENST00000427506 RGS20O76081 388 aa21.24■□□□□ 0.99
GPC1-205ENST00000427506 ACRP10323 421 aa21.24■□□□□ 0.99
GPC1-205ENST00000427506 DGKDQ16760 1214 aa21.24■□□□□ 0.99
GPC1-205ENST00000427506 NFRKBQ6P4R8 1299 aa21.24■□□□□ 0.99
GPC1-205ENST00000427506 USP17L6PQ6QN14 398 aa21.24■□□□□ 0.99
GPC1-205ENST00000427506 NOC4LQ9BVI4 516 aaKnown RBP21.24■□□□□ 0.99
GPC1-205ENST00000427506 RBM28Q9NW13 759 aaKnown RBP21.24■□□□□ 0.99
GPC1-205ENST00000427506 NAP1L2Q9ULW6 460 aaPredicted RBP21.24■□□□□ 0.99
GPC1-205ENST00000427506 UMODL1Q5DID0 1318 aa21.24■□□□□ 0.99
GPC1-205ENST00000427506 ZBTB43O43298 467 aa21.23■□□□□ 0.99
GPC1-205ENST00000427506 REC8O95072 547 aa21.23■□□□□ 0.99
GPC1-205ENST00000427506 CYP2C9P11712 490 aa21.23■□□□□ 0.99
GPC1-205ENST00000427506 SMAD3P84022 425 aaKnown RBP21.23■□□□□ 0.99
GPC1-205ENST00000427506 PTPN11Q06124 597 aaPredicted RBP21.23■□□□□ 0.99
GPC1-205ENST00000427506 GNPTABQ3T906 1256 aa21.23■□□□□ 0.99
GPC1-205ENST00000427506 ZNF697Q5TEC3 545 aa21.23■□□□□ 0.99
GPC1-205ENST00000427506 PSRC1Q6PGN9 363 aaPredicted RBP21.23■□□□□ 0.99
GPC1-205ENST00000427506 EMID1Q96A84 441 aaPredicted RBP21.23■□□□□ 0.99
GPC1-205ENST00000427506 BRPF3Q9ULD4 1205 aa21.23■□□□□ 0.99
GPC1-205ENST00000427506 NOD1Q9Y239 953 aa21.23■□□□□ 0.99
GPC1-205ENST00000427506 KIAA1217Q5T5P2 1943 aa21.22■□□□□ 0.99
GPC1-205ENST00000427506 KLF18A0A0U1RQI7 1052 aa21.22■□□□□ 0.99
GPC1-205ENST00000427506 GGPS1O95749 300 aa21.22■□□□□ 0.99
GPC1-205ENST00000427506 TGFB3P10600 412 aa21.22■□□□□ 0.99
GPC1-205ENST00000427506 RTN1Q16799 776 aa21.22■□□□□ 0.99
GPC1-205ENST00000427506 TMEM240Q5SV17 173 aa21.22■□□□□ 0.99
GPC1-205ENST00000427506 ZNF365Q70YC5 407 aa21.22■□□□□ 0.99
GPC1-205ENST00000427506 C16orf59Q7L2K0 433 aa21.22■□□□□ 0.99
GPC1-205ENST00000427506 HEATR3Q7Z4Q2 680 aa21.22■□□□□ 0.99
GPC1-205ENST00000427506 PPTC7Q8NI37 304 aa21.22■□□□□ 0.99
GPC1-205ENST00000427506 FAM161BQ96MY7 647 aa21.22■□□□□ 0.99
GPC1-205ENST00000427506 SPATA33Q96N06 139 aa21.22■□□□□ 0.99
GPC1-205ENST00000427506 JAKMIP1Q96N16 626 aaKnown RBP21.22■□□□□ 0.99
GPC1-205ENST00000427506 PSTPIP2Q9H939 334 aa21.22■□□□□ 0.99
GPC1-205ENST00000427506 MLXIPQ9HAP2 919 aa21.22■□□□□ 0.99
GPC1-205ENST00000427506 IL23AQ9NPF7 189 aa21.22■□□□□ 0.99
GPC1-205ENST00000427506 MTMR10Q9NXD2 777 aa21.22■□□□□ 0.99
GPC1-205ENST00000427506 RTEL1Q9NZ71 1219 aa21.22■□□□□ 0.99
GPC1-205ENST00000427506 SZT2Q5T011 3432 aa21.21■□□□□ 0.99
GPC1-205ENST00000427506 GOLGA8AA7E2F4 631 aa21.21■□□□□ 0.99
GPC1-205ENST00000427506 GOLGA8BA8MQT2 603 aa21.21■□□□□ 0.99
GPC1-205ENST00000427506 PIK3CDO00329 1044 aa21.21■□□□□ 0.99
GPC1-205ENST00000427506 MEIS2O14770 477 aa21.21■□□□□ 0.99
GPC1-205ENST00000427506 STAM2O75886 525 aa21.21■□□□□ 0.99
GPC1-205ENST00000427506 HSPA4P34932 840 aa21.21■□□□□ 0.99
GPC1-205ENST00000427506 CELF3Q5SZQ8 465 aaKnown RBP21.21■□□□□ 0.99
GPC1-205ENST00000427506 MYSM1Q5VVJ2 828 aa21.21■□□□□ 0.99
GPC1-205ENST00000427506 FAM109BQ6ICB4 259 aaPredicted RBP21.21■□□□□ 0.99
GPC1-205ENST00000427506 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.2■□□□□ 0.98
GPC1-205ENST00000427506 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.2■□□□□ 0.98
GPC1-205ENST00000427506 FGBP02675 491 aa21.2■□□□□ 0.98
GPC1-205ENST00000427506 CPA1P15085 419 aa21.2■□□□□ 0.98
GPC1-205ENST00000427506 UBA1P22314 1058 aaKnown RBP21.2■□□□□ 0.98
GPC1-205ENST00000427506 MRPS9P82933 396 aaKnown RBP21.2■□□□□ 0.98
GPC1-205ENST00000427506 SP2Q02086 613 aa21.2■□□□□ 0.98
GPC1-205ENST00000427506 BLOC1S2Q6QNY1 142 aa21.2■□□□□ 0.98
GPC1-205ENST00000427506 GPKOWQ92917 476 aaPredicted RBP eCLIP21.2■□□□□ 0.98
GPC1-205ENST00000427506 SCLYQ96I15 445 aa21.2■□□□□ 0.98
GPC1-205ENST00000427506 ALG1Q9BT22 464 aa21.2■□□□□ 0.98
GPC1-205ENST00000427506 KATNAL1Q9BW62 490 aa21.2■□□□□ 0.98
GPC1-205ENST00000427506 WNT8AQ9H1J5 351 aa21.2■□□□□ 0.98
GPC1-205ENST00000427506 SNX14Q9Y5W7 946 aa21.2■□□□□ 0.98
GPC1-205ENST00000427506 FRMPD4Q14CM0 1322 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms