RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 ZNF500O60304 480 aaPredicted RBP29.85■■■□□ 2.37
SH3GL3-202ENST00000427482 SV2BQ7L1I2 683 aa29.85■■■□□ 2.37
SH3GL3-202ENST00000427482 LARP4BQ92615 738 aaKnown RBP29.85■■■□□ 2.37
SH3GL3-202ENST00000427482 RAD54LQ92698 747 aa29.85■■■□□ 2.37
SH3GL3-202ENST00000427482 CBFA2T2O43439 604 aa29.85■■■□□ 2.37
SH3GL3-202ENST00000427482 ZNF76P36508 570 aa29.85■■■□□ 2.37
SH3GL3-202ENST00000427482 HSD17B4P51659 736 aa29.85■■■□□ 2.37
SH3GL3-202ENST00000427482 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29.85■■■□□ 2.37
SH3GL3-202ENST00000427482 UIMC1Q96RL1 719 aa29.85■■■□□ 2.37
SH3GL3-202ENST00000427482 CTNND2Q9UQB3 1225 aa29.85■■■□□ 2.37
SH3GL3-202ENST00000427482 GDAQ9Y2T3 454 aa29.85■■■□□ 2.37
SH3GL3-202ENST00000427482 IGLV3-22A0A075B6J6 115 aa29.84■■■□□ 2.37
SH3GL3-202ENST00000427482 SERPINC1P01008 464 aa29.84■■■□□ 2.37
SH3GL3-202ENST00000427482 SPIRE1Q08AE8 756 aa29.84■■■□□ 2.37
SH3GL3-202ENST00000427482 CLEC4DQ8WXI8 215 aa29.84■■■□□ 2.37
SH3GL3-202ENST00000427482 UTRNP46939 3433 aa29.83■■■□□ 2.37
SH3GL3-202ENST00000427482 C19orf81C9J6K1 198 aa29.83■■■□□ 2.37
SH3GL3-202ENST00000427482 MSH4O15457 936 aa29.83■■■□□ 2.37
SH3GL3-202ENST00000427482 FDX1P10109 184 aa29.83■■■□□ 2.37
SH3GL3-202ENST00000427482 STX17P56962 302 aa29.83■■■□□ 2.37
SH3GL3-202ENST00000427482 UBASH3AP57075 661 aa29.83■■■□□ 2.37
SH3GL3-202ENST00000427482 GHRHRQ02643 423 aa29.83■■■□□ 2.37
SH3GL3-202ENST00000427482 MCM6Q14566 821 aa29.83■■■□□ 2.37
SH3GL3-202ENST00000427482 ECM1Q16610 540 aa29.83■■■□□ 2.37
SH3GL3-202ENST00000427482 USP2O75604 605 aaPredicted RBP29.82■■■□□ 2.36
SH3GL3-202ENST00000427482 CCT6AP40227 531 aaKnown RBP29.82■■■□□ 2.36
SH3GL3-202ENST00000427482 ASIC1P78348 528 aa29.82■■■□□ 2.36
SH3GL3-202ENST00000427482 KCNK18Q7Z418 384 aa29.82■■■□□ 2.36
SH3GL3-202ENST00000427482 CCDC47Q96A33 483 aaKnown RBP29.82■■■□□ 2.36
SH3GL3-202ENST00000427482 DCPSQ96C86 337 aaKnown RBP29.82■■■□□ 2.36
SH3GL3-202ENST00000427482 NT5C3AQ9H0P0 336 aa29.82■■■□□ 2.36
SH3GL3-202ENST00000427482 RAVER2Q9HCJ3 691 aaKnown RBP29.82■■■□□ 2.36
SH3GL3-202ENST00000427482 SAMSN1Q9NSI8 373 aaKnown RBP29.82■■■□□ 2.36
SH3GL3-202ENST00000427482 RWDD2AQ9UIY3 292 aa29.82■■■□□ 2.36
SH3GL3-202ENST00000427482 PNMA2Q9UL42 364 aa29.82■■■□□ 2.36
SH3GL3-202ENST00000427482 PTPRFP10586 1907 aa29.82■■■□□ 2.36
SH3GL3-202ENST00000427482 PAK1Q13153 545 aa29.82■■■□□ 2.36
SH3GL3-202ENST00000427482 CPXCR1Q8N123 301 aa29.82■■■□□ 2.36
SH3GL3-202ENST00000427482 GIMAP8Q8ND71 665 aaPredicted RBP29.82■■■□□ 2.36
SH3GL3-202ENST00000427482 CYP2W1Q8TAV3 490 aa29.82■■■□□ 2.36
SH3GL3-202ENST00000427482 ZBED4O75132 1171 aa29.81■■■□□ 2.36
SH3GL3-202ENST00000427482 STAT3P40763 770 aa29.81■■■□□ 2.36
SH3GL3-202ENST00000427482 PRCPP42785 496 aa29.81■■■□□ 2.36
SH3GL3-202ENST00000427482 HMGCS2P54868 508 aa29.81■■■□□ 2.36
SH3GL3-202ENST00000427482 DHX8Q14562 1220 aaKnown RBP29.81■■■□□ 2.36
SH3GL3-202ENST00000427482 MCF2L2Q86YR7 1114 aa29.81■■■□□ 2.36
SH3GL3-202ENST00000427482 IMPACTQ9P2X3 320 aa29.81■■■□□ 2.36
SH3GL3-202ENST00000427482 NFIBO00712 420 aa29.8■■■□□ 2.36
SH3GL3-202ENST00000427482 HSP90AA4PQ58FG1 418 aa29.8■■■□□ 2.36
SH3GL3-202ENST00000427482 ADSSL1Q8N142 457 aa29.8■■■□□ 2.36
SH3GL3-202ENST00000427482 MYMKA6NI61 221 aa29.8■■■□□ 2.36
SH3GL3-202ENST00000427482 ALAS1P13196 640 aa29.8■■■□□ 2.36
SH3GL3-202ENST00000427482 CNNM4Q6P4Q7 775 aa29.8■■■□□ 2.36
SH3GL3-202ENST00000427482 SULF1Q8IWU6 871 aa29.8■■■□□ 2.36
SH3GL3-202ENST00000427482 NELFBQ8WX92 580 aa29.8■■■□□ 2.36
SH3GL3-202ENST00000427482 GTPBP4Q9BZE4 634 aaKnown RBP29.8■■■□□ 2.36
SH3GL3-202ENST00000427482 LRRC27Q9C0I9 530 aa29.8■■■□□ 2.36
SH3GL3-202ENST00000427482 EXOC1Q9NV70 894 aa29.8■■■□□ 2.36
SH3GL3-202ENST00000427482 ADM5C9JUS6 153 aa29.79■■■□□ 2.36
SH3GL3-202ENST00000427482 VWA5AO00534 786 aa29.79■■■□□ 2.36
SH3GL3-202ENST00000427482 CDK11BP21127 795 aaKnown RBP29.79■■■□□ 2.36
SH3GL3-202ENST00000427482 PRKG1Q13976 671 aa29.79■■■□□ 2.36
SH3GL3-202ENST00000427482 CDKAL1Q5VV42 579 aa29.79■■■□□ 2.36
SH3GL3-202ENST00000427482 HAUS3Q68CZ6 603 aa29.79■■■□□ 2.36
SH3GL3-202ENST00000427482 ATG4CQ96DT6 458 aa29.79■■■□□ 2.36
SH3GL3-202ENST00000427482 NAP1L5Q96NT1 182 aaPredicted RBP29.79■■■□□ 2.36
SH3GL3-202ENST00000427482 VAV3Q9UKW4 847 aa29.79■■■□□ 2.36
SH3GL3-202ENST00000427482 AFG3L2Q9Y4W6 797 aa29.79■■■□□ 2.36
SH3GL3-202ENST00000427482 CTDP1Q9Y5B0 961 aaPredicted RBP29.79■■■□□ 2.36
SH3GL3-202ENST00000427482 RPTORQ8N122 1335 aa29.79■■■□□ 2.36
SH3GL3-202ENST00000427482 FILIP1Q7Z7B0 1213 aa29.78■■■□□ 2.36
SH3GL3-202ENST00000427482 SAMD3Q8N6K7 520 aa29.78■■■□□ 2.36
SH3GL3-202ENST00000427482 L3MBTL3Q96JM7 780 aaPredicted RBP29.78■■■□□ 2.36
SH3GL3-202ENST00000427482 RABGAP1Q9Y3P9 1069 aa29.78■■■□□ 2.36
SH3GL3-202ENST00000427482 STK24Q9Y6E0 443 aa29.78■■■□□ 2.36
SH3GL3-202ENST00000427482 UBXN2AP68543 259 aa29.78■■■□□ 2.36
SH3GL3-202ENST00000427482 PDE4DQ08499 809 aa29.78■■■□□ 2.36
SH3GL3-202ENST00000427482 MUM1L1Q5H9M0 696 aa29.78■■■□□ 2.36
SH3GL3-202ENST00000427482 DLK2Q6UY11 383 aa29.78■■■□□ 2.36
SH3GL3-202ENST00000427482 TMC6Q7Z403 805 aa29.78■■■□□ 2.36
SH3GL3-202ENST00000427482 ERMNQ8TAM6 284 aa29.78■■■□□ 2.36
SH3GL3-202ENST00000427482 MAP3K20Q9NYL2 800 aaKnown RBP29.78■■■□□ 2.36
SH3GL3-202ENST00000427482 COL20A1Q9P218 1284 aa29.78■■■□□ 2.36
SH3GL3-202ENST00000427482 SNCAIPQ9Y6H5 919 aa29.78■■■□□ 2.36
SH3GL3-202ENST00000427482 POTEB3A0JP26 581 aa29.77■■■□□ 2.36
SH3GL3-202ENST00000427482 POTECB2RU33 542 aa29.77■■■□□ 2.36
SH3GL3-202ENST00000427482 CEP55Q53EZ4 464 aa29.77■■■□□ 2.36
SH3GL3-202ENST00000427482 NCAPH2Q6IBW4 605 aa29.77■■■□□ 2.36
SH3GL3-202ENST00000427482 POTEBQ6S5H4 581 aa29.77■■■□□ 2.36
SH3GL3-202ENST00000427482 PPP1R3FQ6ZSY5 799 aaPredicted RBP29.77■■■□□ 2.36
SH3GL3-202ENST00000427482 CACTINQ8WUQ7 758 aaKnown RBP29.77■■■□□ 2.36
SH3GL3-202ENST00000427482 KIAA1024Q9UPX6 916 aa29.77■■■□□ 2.36
SH3GL3-202ENST00000427482 MAPK8IP1Q9UQF2 711 aa29.77■■■□□ 2.36
SH3GL3-202ENST00000427482 PVALEFA0A1B0GWK0 134 aa29.76■■■□□ 2.35
SH3GL3-202ENST00000427482 MED24O75448 989 aa29.76■■■□□ 2.35
SH3GL3-202ENST00000427482 GSDMDP57764 484 aa29.76■■■□□ 2.35
SH3GL3-202ENST00000427482 MAP3K9P80192 1104 aa29.76■■■□□ 2.35
SH3GL3-202ENST00000427482 STIM1Q13586 685 aa29.76■■■□□ 2.35
SH3GL3-202ENST00000427482 DPY19L2Q6NUT2 758 aa29.76■■■□□ 2.35
SH3GL3-202ENST00000427482 UNC13DQ70J99 1090 aa29.76■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms