RNA–Protein interactions for RNA: ENST00000427449.1

HLA-DQB2-230, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

Gene HLA-DQB2, Length 721 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-230ENST00000427449 VSIG10LQ86VR7 867 aa18.52■□□□□ 0.56
HLA-DQB2-230ENST00000427449 RAB11FIP4Q86YS3 637 aa18.52■□□□□ 0.56
HLA-DQB2-230ENST00000427449 SAMD3Q8N6K7 520 aa18.52■□□□□ 0.56
HLA-DQB2-230ENST00000427449 TCEANC2Q96MN5 208 aa18.52■□□□□ 0.56
HLA-DQB2-230ENST00000427449 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.52■□□□□ 0.56
HLA-DQB2-230ENST00000427449 BCAS3Q9H6U6 928 aa18.52■□□□□ 0.56
HLA-DQB2-230ENST00000427449 FAM217BQ9NTX9 383 aaPredicted RBP18.52■□□□□ 0.56
HLA-DQB2-230ENST00000427449 BRPF3Q9ULD4 1205 aa18.52■□□□□ 0.56
HLA-DQB2-230ENST00000427449 NID2Q14112 1375 aa18.52■□□□□ 0.55
HLA-DQB2-230ENST00000427449 ERICH2A1L162 156 aa18.51■□□□□ 0.55
HLA-DQB2-230ENST00000427449 CSF2RAP15509 400 aa18.51■□□□□ 0.55
HLA-DQB2-230ENST00000427449 CYP2C18P33260 490 aa18.51■□□□□ 0.55
HLA-DQB2-230ENST00000427449 CPT1AP50416 773 aa18.51■□□□□ 0.55
HLA-DQB2-230ENST00000427449 TTLL4Q14679 1199 aa18.51■□□□□ 0.55
HLA-DQB2-230ENST00000427449 TMEM240Q5SV17 173 aa18.51■□□□□ 0.55
HLA-DQB2-230ENST00000427449 APOA5Q6Q788 366 aa18.51■□□□□ 0.55
HLA-DQB2-230ENST00000427449 TMTC3Q6ZXV5 915 aa18.51■□□□□ 0.55
HLA-DQB2-230ENST00000427449 AFG1LQ8WV93 481 aa18.51■□□□□ 0.55
HLA-DQB2-230ENST00000427449 PPP1R12CQ9BZL4 782 aa18.51■□□□□ 0.55
HLA-DQB2-230ENST00000427449 TRMT13Q9NUP7 481 aaKnown RBP18.51■□□□□ 0.55
HLA-DQB2-230ENST00000427449 STXBP2Q15833 593 aa18.5■□□□□ 0.55
HLA-DQB2-230ENST00000427449 TYW1BQ6NUM6 668 aa18.5■□□□□ 0.55
HLA-DQB2-230ENST00000427449 SEPT14Q6ZU15 432 aa18.5■□□□□ 0.55
HLA-DQB2-230ENST00000427449 ZFP91Q96JP5 570 aaPredicted RBP18.5■□□□□ 0.55
HLA-DQB2-230ENST00000427449 MTG1Q9BT17 334 aaPredicted RBP18.5■□□□□ 0.55
HLA-DQB2-230ENST00000427449 TTYH1Q9H313 450 aaPredicted RBP18.5■□□□□ 0.55
HLA-DQB2-230ENST00000427449 POLR3EQ9NVU0 708 aa18.5■□□□□ 0.55
HLA-DQB2-230ENST00000427449 TELO2Q9Y4R8 837 aa18.5■□□□□ 0.55
HLA-DQB2-230ENST00000427449 MICAL3Q7RTP6 2002 aa18.5■□□□□ 0.55
HLA-DQB2-230ENST00000427449 HAS3O00219 553 aa18.49■□□□□ 0.55
HLA-DQB2-230ENST00000427449 PIK3CDO00329 1044 aa18.49■□□□□ 0.55
HLA-DQB2-230ENST00000427449 EIF3JO75822 258 aaKnown RBP18.49■□□□□ 0.55
HLA-DQB2-230ENST00000427449 HIC1Q14526 733 aa18.49■□□□□ 0.55
HLA-DQB2-230ENST00000427449 NBPF20Q3BBV1 942 aa18.49■□□□□ 0.55
HLA-DQB2-230ENST00000427449 ARHGEF16Q5VV41 709 aa18.49■□□□□ 0.55
HLA-DQB2-230ENST00000427449 CASC1Q6TDU7 716 aa18.49■□□□□ 0.55
HLA-DQB2-230ENST00000427449 DEFB123Q8N688 67 aa18.49■□□□□ 0.55
HLA-DQB2-230ENST00000427449 INPP4AQ96PE3 977 aaPredicted RBP18.49■□□□□ 0.55
HLA-DQB2-230ENST00000427449 COL4A4P53420 1690 aaPredicted RBP18.49■□□□□ 0.55
HLA-DQB2-230ENST00000427449 F2P00734 622 aa18.48■□□□□ 0.55
HLA-DQB2-230ENST00000427449 GH1P01241 217 aa18.48■□□□□ 0.55
HLA-DQB2-230ENST00000427449 MYL3P08590 195 aa18.48■□□□□ 0.55
HLA-DQB2-230ENST00000427449 CPA1P15085 419 aa18.48■□□□□ 0.55
HLA-DQB2-230ENST00000427449 UBA1P22314 1058 aaKnown RBP18.48■□□□□ 0.55
HLA-DQB2-230ENST00000427449 HSPA4P34932 840 aa18.48■□□□□ 0.55
HLA-DQB2-230ENST00000427449 SMAD3P84022 425 aaKnown RBP18.48■□□□□ 0.55
HLA-DQB2-230ENST00000427449 GPNMBQ14956 572 aa18.48■□□□□ 0.55
HLA-DQB2-230ENST00000427449 SESTD1Q86VW0 696 aa18.48■□□□□ 0.55
HLA-DQB2-230ENST00000427449 PIBF1Q8WXW3 757 aa18.48■□□□□ 0.55
HLA-DQB2-230ENST00000427449 DHX38Q92620 1227 aaKnown RBP18.48■□□□□ 0.55
HLA-DQB2-230ENST00000427449 NEK1Q96PY6 1258 aa18.48■□□□□ 0.55
HLA-DQB2-230ENST00000427449 SEZ6LQ9BYH1 1024 aa18.48■□□□□ 0.55
HLA-DQB2-230ENST00000427449 HIPK3Q9H422 1215 aa18.48■□□□□ 0.55
HLA-DQB2-230ENST00000427449 hCG_1642624A0A1W2PR95 340 aa18.47■□□□□ 0.55
HLA-DQB2-230ENST00000427449 GCOM1H8Y6P7 765 aaPredicted RBP18.47■□□□□ 0.55
HLA-DQB2-230ENST00000427449 ZEB2O60315 1214 aa18.47■□□□□ 0.55
HLA-DQB2-230ENST00000427449 POLR2MP0CAP2 368 aa18.47■□□□□ 0.55
HLA-DQB2-230ENST00000427449 CYP2C9P11712 490 aa18.47■□□□□ 0.55
HLA-DQB2-230ENST00000427449 MYSM1Q5VVJ2 828 aa18.47■□□□□ 0.55
HLA-DQB2-230ENST00000427449 NFRKBQ6P4R8 1299 aa18.47■□□□□ 0.55
HLA-DQB2-230ENST00000427449 USP17L6PQ6QN14 398 aa18.47■□□□□ 0.55
HLA-DQB2-230ENST00000427449 CTCFLQ8NI51 663 aaPredicted RBP18.47■□□□□ 0.55
HLA-DQB2-230ENST00000427449 CCDC136Q96JN2 1154 aa18.47■□□□□ 0.55
HLA-DQB2-230ENST00000427449 MPHOSPH6Q99547 160 aaKnown RBP18.47■□□□□ 0.55
HLA-DQB2-230ENST00000427449 AGXT2Q9BYV1 514 aa18.47■□□□□ 0.55
HLA-DQB2-230ENST00000427449 CXXC1Q9P0U4 656 aaPredicted RBP18.47■□□□□ 0.55
HLA-DQB2-230ENST00000427449 SNX14Q9Y5W7 946 aa18.47■□□□□ 0.55
HLA-DQB2-230ENST00000427449 A0A0C4DFX4 3053 aa18.46■□□□□ 0.55
HLA-DQB2-230ENST00000427449 TLR3O15455 904 aaKnown RBP18.46■□□□□ 0.55
HLA-DQB2-230ENST00000427449 ACRP10323 421 aa18.46■□□□□ 0.55
HLA-DQB2-230ENST00000427449 CDC27P30260 824 aa18.46■□□□□ 0.55
HLA-DQB2-230ENST00000427449 HOXC8P31273 242 aa18.46■□□□□ 0.55
HLA-DQB2-230ENST00000427449 ICAM3P32942 547 aa18.46■□□□□ 0.55
HLA-DQB2-230ENST00000427449 KIF5BP33176 963 aa18.46■□□□□ 0.55
HLA-DQB2-230ENST00000427449 HSDL1Q3SXM5 330 aa18.46■□□□□ 0.55
HLA-DQB2-230ENST00000427449 DHX32Q7L7V1 743 aaKnown RBP18.46■□□□□ 0.55
HLA-DQB2-230ENST00000427449 MICU3Q86XE3 530 aa18.46■□□□□ 0.55
HLA-DQB2-230ENST00000427449 TMTC2Q8N394 836 aa18.46■□□□□ 0.55
HLA-DQB2-230ENST00000427449 FANCBQ8NB91 859 aa18.46■□□□□ 0.55
HLA-DQB2-230ENST00000427449 PPTC7Q8NI37 304 aa18.46■□□□□ 0.55
HLA-DQB2-230ENST00000427449 WNT8BQ93098 351 aa18.46■□□□□ 0.55
HLA-DQB2-230ENST00000427449 VTI1AQ96AJ9 217 aa18.46■□□□□ 0.55
HLA-DQB2-230ENST00000427449 RNPC3Q96LT9 517 aaKnown RBP18.46■□□□□ 0.55
HLA-DQB2-230ENST00000427449 LOXHD1Q8IVV2 1947 aa18.46■□□□□ 0.55
HLA-DQB2-230ENST00000427449 SPTBN5Q9NRC6 3674 aaKnown RBP18.45■□□□□ 0.54
HLA-DQB2-230ENST00000427449 CCDC69A6NI79 296 aa18.45■□□□□ 0.54
HLA-DQB2-230ENST00000427449 B4DLN1 442 aa18.45■□□□□ 0.54
HLA-DQB2-230ENST00000427449 ADAMTS3O15072 1205 aa18.45■□□□□ 0.54
HLA-DQB2-230ENST00000427449 MRPL12P52815 198 aaKnown RBP18.45■□□□□ 0.54
HLA-DQB2-230ENST00000427449 RBL2Q08999 1139 aa18.45■□□□□ 0.54
HLA-DQB2-230ENST00000427449 CELF3Q5SZQ8 465 aaKnown RBP18.45■□□□□ 0.54
HLA-DQB2-230ENST00000427449 GDF6Q6KF10 455 aaPredicted RBP18.45■□□□□ 0.54
HLA-DQB2-230ENST00000427449 TRAF7Q6Q0C0 670 aa18.45■□□□□ 0.54
HLA-DQB2-230ENST00000427449 FCHSD1Q86WN1 690 aa18.45■□□□□ 0.54
HLA-DQB2-230ENST00000427449 RRP36Q96EU6 259 aaKnown RBP18.45■□□□□ 0.54
HLA-DQB2-230ENST00000427449 LZTS2Q9BRK4 669 aa18.45■□□□□ 0.54
HLA-DQB2-230ENST00000427449 IL23AQ9NPF7 189 aa18.45■□□□□ 0.54
HLA-DQB2-230ENST00000427449 VCANP13611 3396 aa18.44■□□□□ 0.54
HLA-DQB2-230ENST00000427449 KPNA6O60684 536 aa18.44■□□□□ 0.54
HLA-DQB2-230ENST00000427449 ZNF286BP0CG31 522 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms