RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 FSCN1Q16658 493 aaKnown RBP20.72■□□□□ 0.91
HERC3-205ENST00000426683 SLC39A5Q6ZMH5 540 aa20.72■□□□□ 0.91
HERC3-205ENST00000426683 OR6J1Q8NGC5 347 aa20.72■□□□□ 0.91
HERC3-205ENST00000426683 COPS5Q92905 334 aa20.72■□□□□ 0.91
HERC3-205ENST00000426683 ZFP91Q96JP5 570 aaPredicted RBP20.72■□□□□ 0.91
HERC3-205ENST00000426683 RNF26Q9BY78 433 aaPredicted RBP20.72■□□□□ 0.91
HERC3-205ENST00000426683 TPCN1Q9ULQ1 816 aa20.72■□□□□ 0.91
HERC3-205ENST00000426683 SMCO2A6NFE2 343 aa20.71■□□□□ 0.91
HERC3-205ENST00000426683 H0YGN5 161 aa20.71■□□□□ 0.91
HERC3-205ENST00000426683 CPLX1O14810 134 aa20.71■□□□□ 0.91
HERC3-205ENST00000426683 ADCY7P51828 1080 aa20.71■□□□□ 0.91
HERC3-205ENST00000426683 PKN1Q16512 942 aa20.71■□□□□ 0.91
HERC3-205ENST00000426683 CCDC62Q6P9F0 684 aa20.71■□□□□ 0.91
HERC3-205ENST00000426683 SLKQ9H2G2 1235 aaPredicted RBP20.71■□□□□ 0.91
HERC3-205ENST00000426683 RIC8AQ9NPQ8 531 aa20.71■□□□□ 0.91
HERC3-205ENST00000426683 STARD7Q9NQZ5 370 aa20.71■□□□□ 0.91
HERC3-205ENST00000426683 SPDYE3A6NKU9 549 aa20.7■□□□□ 0.9
HERC3-205ENST00000426683 ZEB2O60315 1214 aa20.7■□□□□ 0.9
HERC3-205ENST00000426683 RTP1P59025 263 aa20.7■□□□□ 0.9
HERC3-205ENST00000426683 SCRN1Q12765 414 aa20.7■□□□□ 0.9
HERC3-205ENST00000426683 LY6KQ17RY6 165 aa20.7■□□□□ 0.9
HERC3-205ENST00000426683 CPLX2Q6PUV4 134 aaKnown RBP20.7■□□□□ 0.9
HERC3-205ENST00000426683 GLT1D1Q96MS3 346 aa20.7■□□□□ 0.9
HERC3-205ENST00000426683 C22orf23Q9BZE7 217 aa20.7■□□□□ 0.9
HERC3-205ENST00000426683 MRVI1Q9Y6F6 885 aa20.7■□□□□ 0.9
HERC3-205ENST00000426683 RGS20O76081 388 aa20.69■□□□□ 0.9
HERC3-205ENST00000426683 MRPS9P82933 396 aaKnown RBP20.69■□□□□ 0.9
HERC3-205ENST00000426683 SSRP1Q08945 709 aaKnown RBP20.69■□□□□ 0.9
HERC3-205ENST00000426683 SNX17Q15036 470 aa20.69■□□□□ 0.9
HERC3-205ENST00000426683 TRIM22Q8IYM9 498 aa20.69■□□□□ 0.9
HERC3-205ENST00000426683 DDX41Q9UJV9 622 aaKnown RBP20.69■□□□□ 0.9
HERC3-205ENST00000426683 PCDHA6Q9UN73 950 aa20.69■□□□□ 0.9
HERC3-205ENST00000426683 ATP11BQ9Y2G3 1177 aa20.69■□□□□ 0.9
HERC3-205ENST00000426683 PCDHA8Q9Y5H6 950 aa20.69■□□□□ 0.9
HERC3-205ENST00000426683 PFKFB2O60825 505 aa20.68■□□□□ 0.9
HERC3-205ENST00000426683 CPT1AP50416 773 aa20.68■□□□□ 0.9
HERC3-205ENST00000426683 TRIM60Q495X7 471 aa20.68■□□□□ 0.9
HERC3-205ENST00000426683 PCNX4Q63HM2 1172 aa20.68■□□□□ 0.9
HERC3-205ENST00000426683 CXCL17Q6UXB2 119 aa20.68■□□□□ 0.9
HERC3-205ENST00000426683 CCDC12Q8WUD4 166 aaPredicted RBP20.68■□□□□ 0.9
HERC3-205ENST00000426683 VTI1AQ96AJ9 217 aa20.68■□□□□ 0.9
HERC3-205ENST00000426683 GLT8D2Q9H1C3 349 aa20.68■□□□□ 0.9
HERC3-205ENST00000426683 RTEL1Q9NZ71 1219 aa20.68■□□□□ 0.9
HERC3-205ENST00000426683 PDE4DIPQ5VU43 2346 aa20.67■□□□□ 0.9
HERC3-205ENST00000426683 ALPK3Q96L96 1907 aa20.67■□□□□ 0.9
HERC3-205ENST00000426683 STAM2O75886 525 aa20.67■□□□□ 0.9
HERC3-205ENST00000426683 GH1P01241 217 aa20.67■□□□□ 0.9
HERC3-205ENST00000426683 GNPTABQ3T906 1256 aa20.67■□□□□ 0.9
HERC3-205ENST00000426683 C1orf53Q5VUE5 145 aa20.67■□□□□ 0.9
HERC3-205ENST00000426683 XRRA1Q6P2D8 792 aa20.67■□□□□ 0.9
HERC3-205ENST00000426683 KCNV1Q6PIU1 500 aa20.67■□□□□ 0.9
HERC3-205ENST00000426683 TEX2Q8IWB9 1127 aa20.67■□□□□ 0.9
HERC3-205ENST00000426683 PGBD1Q96JS3 809 aa20.67■□□□□ 0.9
HERC3-205ENST00000426683 EHMT1Q9H9B1 1298 aa20.67■□□□□ 0.9
HERC3-205ENST00000426683 ZMYND8Q9ULU4 1186 aaPredicted RBP20.67■□□□□ 0.9
HERC3-205ENST00000426683 ELP1O95163 1332 aa20.67■□□□□ 0.9
HERC3-205ENST00000426683 ESYT2A0FGR8 921 aa20.66■□□□□ 0.9
HERC3-205ENST00000426683 RBM25P49756 843 aaKnown RBP20.66■□□□□ 0.9
HERC3-205ENST00000426683 ARHGAP1Q07960 439 aa20.66■□□□□ 0.9
HERC3-205ENST00000426683 ME3Q16798 604 aa20.66■□□□□ 0.9
HERC3-205ENST00000426683 BRDTQ58F21 947 aaPredicted RBP20.66■□□□□ 0.9
HERC3-205ENST00000426683 KIF2CQ99661 725 aa20.66■□□□□ 0.9
HERC3-205ENST00000426683 ZMYND12Q9H0C1 365 aa20.66■□□□□ 0.9
HERC3-205ENST00000426683 UPF2Q9HAU5 1272 aaKnown RBP20.66■□□□□ 0.9
HERC3-205ENST00000426683 C6orf50Q9HD87 102 aa20.66■□□□□ 0.9
HERC3-205ENST00000426683 TMEM260Q9NX78 707 aa20.66■□□□□ 0.9
HERC3-205ENST00000426683 VPS54Q9P1Q0 977 aa20.66■□□□□ 0.9
HERC3-205ENST00000426683 A6NJR5 290 aa20.65■□□□□ 0.9
HERC3-205ENST00000426683 CABYRO75952 493 aa20.65■□□□□ 0.9
HERC3-205ENST00000426683 CDKL5O76039 1030 aa20.65■□□□□ 0.9
HERC3-205ENST00000426683 DEXIO95424 95 aa20.65■□□□□ 0.9
HERC3-205ENST00000426683 LARGE1O95461 756 aa20.65■□□□□ 0.9
HERC3-205ENST00000426683 FOSP01100 380 aaPredicted RBP20.65■□□□□ 0.9
HERC3-205ENST00000426683 MYL3P08590 195 aa20.65■□□□□ 0.9
HERC3-205ENST00000426683 SYN1P17600 705 aa20.65■□□□□ 0.9
HERC3-205ENST00000426683 CLK2P49760 499 aaKnown RBP20.65■□□□□ 0.9
HERC3-205ENST00000426683 CCDC148Q8NFR7 591 aa20.65■□□□□ 0.9
HERC3-205ENST00000426683 AFG1LQ8WV93 481 aa20.65■□□□□ 0.9
HERC3-205ENST00000426683 INPP4AQ96PE3 977 aaPredicted RBP20.65■□□□□ 0.9
HERC3-205ENST00000426683 ANO3Q9BYT9 981 aa20.65■□□□□ 0.9
HERC3-205ENST00000426683 POLR3EQ9NVU0 708 aa20.65■□□□□ 0.9
HERC3-205ENST00000426683 A0A0U1RQG5 324 aaPredicted RBP20.64■□□□□ 0.89
HERC3-205ENST00000426683 TGFB3P10600 412 aa20.64■□□□□ 0.89
HERC3-205ENST00000426683 GNA11P29992 359 aa20.64■□□□□ 0.89
HERC3-205ENST00000426683 ICAM3P32942 547 aa20.64■□□□□ 0.89
HERC3-205ENST00000426683 TLE2Q04725 743 aa20.64■□□□□ 0.89
HERC3-205ENST00000426683 AP3B2Q13367 1082 aa20.64■□□□□ 0.89
HERC3-205ENST00000426683 LAMC2Q13753 1193 aa20.64■□□□□ 0.89
HERC3-205ENST00000426683 JAKMIP3Q5VZ66 844 aa20.64■□□□□ 0.89
HERC3-205ENST00000426683 NLRX1Q86UT6 975 aa20.64■□□□□ 0.89
HERC3-205ENST00000426683 DHX37Q8IY37 1157 aaKnown RBP20.64■□□□□ 0.89
HERC3-205ENST00000426683 NECAB1Q8N987 351 aa20.64■□□□□ 0.89
HERC3-205ENST00000426683 SPATA31C2B4DYI2 1134 aa20.63■□□□□ 0.89
HERC3-205ENST00000426683 ARVCFO00192 962 aa20.63■□□□□ 0.89
HERC3-205ENST00000426683 ADAMTS3O15072 1205 aa20.63■□□□□ 0.89
HERC3-205ENST00000426683 FIBPO43427 364 aa20.63■□□□□ 0.89
HERC3-205ENST00000426683 SORBS3O60504 671 aa20.63■□□□□ 0.89
HERC3-205ENST00000426683 PQBP1O60828 265 aaKnown RBP20.63■□□□□ 0.89
HERC3-205ENST00000426683 GGPS1O95749 300 aa20.63■□□□□ 0.89
HERC3-205ENST00000426683 UBA1P22314 1058 aaKnown RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms