RNA–Protein interactions for RNA: ENST00000426431.2

SP1-202, Transcript of Sp1 transcription factor, humanhuman

TSL 1 (best) BASIC

Gene SP1, Length 7,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-202ENST00000426431 KRT76Q01546 638 aa11.13□□□□□ -0.63
SP1-202ENST00000426431 SF3B3Q15393 1217 aaKnown RBP11.13□□□□□ -0.63
SP1-202ENST00000426431 MUM1L1Q5H9M0 696 aa11.13□□□□□ -0.63
SP1-202ENST00000426431 ZNF658Q5TYW1 1059 aaPredicted RBP11.13□□□□□ -0.63
SP1-202ENST00000426431 SLC12A6Q9UHW9 1150 aa11.13□□□□□ -0.63
SP1-202ENST00000426431 HYOU1Q9Y4L1 999 aa11.13□□□□□ -0.63
SP1-202ENST00000426431 NEURL4Q96JN8 1562 aa11.13□□□□□ -0.63
SP1-202ENST00000426431 KIF23Q02241 960 aaPredicted RBP11.13□□□□□ -0.63
SP1-202ENST00000426431 SMC1BQ8NDV3 1235 aa11.13□□□□□ -0.63
SP1-202ENST00000426431 FAM207AQ9NSI2 230 aaPredicted RBP11.13□□□□□ -0.63
SP1-202ENST00000426431 SPATA31A1Q5TZJ5 1347 aa11.12□□□□□ -0.63
SP1-202ENST00000426431 CNTNAP4Q9C0A0 1308 aa11.12□□□□□ -0.63
SP1-202ENST00000426431 F8W8V4 182 aa11.12□□□□□ -0.63
SP1-202ENST00000426431 ZBTB5O15062 677 aa11.12□□□□□ -0.63
SP1-202ENST00000426431 ZNF189O75820 626 aaPredicted RBP11.12□□□□□ -0.63
SP1-202ENST00000426431 RASA3Q14644 834 aa11.12□□□□□ -0.63
SP1-202ENST00000426431 MAN2A1Q16706 1144 aa11.12□□□□□ -0.63
SP1-202ENST00000426431 KYAT1Q16773 422 aa11.12□□□□□ -0.63
SP1-202ENST00000426431 SYNE4Q8N205 404 aa11.12□□□□□ -0.63
SP1-202ENST00000426431 RBM46Q8TBY0 533 aaKnown RBP11.12□□□□□ -0.63
SP1-202ENST00000426431 UBE2Q2Q8WVN8 375 aa11.12□□□□□ -0.63
SP1-202ENST00000426431 TLR7Q9NYK1 1049 aaKnown RBP11.12□□□□□ -0.63
SP1-202ENST00000426431 AKT3Q9Y243 479 aa11.12□□□□□ -0.63
SP1-202ENST00000426431 CPDO75976 1380 aa11.12□□□□□ -0.63
SP1-202ENST00000426431 IGKV5-2P06315 115 aa11.12□□□□□ -0.63
SP1-202ENST00000426431 HSPA6P17066 643 aa11.12□□□□□ -0.63
SP1-202ENST00000426431 TNFAIP2Q03169 654 aa11.12□□□□□ -0.63
SP1-202ENST00000426431 NEDD9Q14511 834 aa11.12□□□□□ -0.63
SP1-202ENST00000426431 CCDC105Q8IYK2 499 aa11.12□□□□□ -0.63
SP1-202ENST00000426431 TTC16Q8NEE8 873 aa11.12□□□□□ -0.63
SP1-202ENST00000426431 COA7Q96BR5 231 aa11.12□□□□□ -0.63
SP1-202ENST00000426431 CEP170P1Q96L14 293 aa11.12□□□□□ -0.63
SP1-202ENST00000426431 SLC12A2P55011 1212 aa11.12□□□□□ -0.63
SP1-202ENST00000426431 FAM173BQ6P4H8 233 aa11.12□□□□□ -0.63
SP1-202ENST00000426431 RNF207Q6ZRF8 634 aa11.12□□□□□ -0.63
SP1-202ENST00000426431 B4GALNT4Q76KP1 1039 aa11.12□□□□□ -0.63
SP1-202ENST00000426431 RSAD2Q8WXG1 361 aa11.12□□□□□ -0.63
SP1-202ENST00000426431 PIGSQ96S52 555 aa11.12□□□□□ -0.63
SP1-202ENST00000426431 PUS7LQ9H0K6 701 aaKnown RBP11.12□□□□□ -0.63
SP1-202ENST00000426431 CEP170BQ9Y4F5 1589 aaPredicted RBP11.12□□□□□ -0.63
SP1-202ENST00000426431 OATP04181 439 aa11.12□□□□□ -0.63
SP1-202ENST00000426431 NFKBIAP25963 317 aa11.12□□□□□ -0.63
SP1-202ENST00000426431 STXBP2Q15833 593 aa11.12□□□□□ -0.63
SP1-202ENST00000426431 ARHGAP44Q17R89 818 aa11.12□□□□□ -0.63
SP1-202ENST00000426431 ZNF579Q8NAF0 562 aaKnown RBP11.12□□□□□ -0.63
SP1-202ENST00000426431 PI4K2BQ8TCG2 481 aa11.12□□□□□ -0.63
SP1-202ENST00000426431 P2RX5Q93086 422 aa11.12□□□□□ -0.63
SP1-202ENST00000426431 MMS19Q96T76 1030 aa11.12□□□□□ -0.63
SP1-202ENST00000426431 ALDH8A1Q9H2A2 487 aaPredicted RBP11.12□□□□□ -0.63
SP1-202ENST00000426431 PIH1D3Q9NQM4 214 aaKnown RBP11.12□□□□□ -0.63
SP1-202ENST00000426431 ZSWIM5Q9P217 1185 aa11.12□□□□□ -0.63
SP1-202ENST00000426431 C21orf2O43822 256 aa11.12□□□□□ -0.63
SP1-202ENST00000426431 ORC4O43929 436 aa11.12□□□□□ -0.63
SP1-202ENST00000426431 MCAMP43121 646 aa11.12□□□□□ -0.63
SP1-202ENST00000426431 RAD51AP2Q09MP3 1159 aa11.12□□□□□ -0.63
SP1-202ENST00000426431 NECTIN1Q15223 517 aa11.12□□□□□ -0.63
SP1-202ENST00000426431 FNBP4Q8N3X1 1017 aaPredicted RBP11.12□□□□□ -0.63
SP1-202ENST00000426431 PFDN4Q9NQP4 134 aa11.12□□□□□ -0.63
SP1-202ENST00000426431 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.12□□□□□ -0.63
SP1-202ENST00000426431 HLFQ16534 295 aa11.12□□□□□ -0.63
SP1-202ENST00000426431 TKFCQ3LXA3 575 aa11.12□□□□□ -0.63
SP1-202ENST00000426431 TMTC3Q6ZXV5 915 aa11.12□□□□□ -0.63
SP1-202ENST00000426431 KCTD1Q719H9 257 aa11.12□□□□□ -0.63
SP1-202ENST00000426431 KCNK9Q9NPC2 374 aa11.12□□□□□ -0.63
SP1-202ENST00000426431 SAR1BQ9Y6B6 198 aa11.12□□□□□ -0.63
SP1-202ENST00000426431 AFPP02771 609 aaKnown RBP11.11□□□□□ -0.63
SP1-202ENST00000426431 CDC42EP1Q00587 391 aa11.11□□□□□ -0.63
SP1-202ENST00000426431 PPP1R21Q6ZMI0 780 aa11.11□□□□□ -0.63
SP1-202ENST00000426431 U2AF1L4Q8WU68 220 aaKnown RBP11.11□□□□□ -0.63
SP1-202ENST00000426431 ANO3Q9BYT9 981 aa11.11□□□□□ -0.63
SP1-202ENST00000426431 ABT1Q9ULW3 272 aaKnown RBP11.11□□□□□ -0.63
SP1-202ENST00000426431 ATF5Q9Y2D1 282 aaPredicted RBP11.11□□□□□ -0.63
SP1-202ENST00000426431 ARMCX2Q7L311 632 aa11.11□□□□□ -0.63
SP1-202ENST00000426431 RBSNQ9H1K0 784 aa11.11□□□□□ -0.63
SP1-202ENST00000426431 RNF14Q9UBS8 474 aa11.11□□□□□ -0.63
SP1-202ENST00000426431 MKRN1Q9UHC7 482 aaKnown RBP11.11□□□□□ -0.63
SP1-202ENST00000426431 KDM6AO15550 1401 aaPredicted RBP11.11□□□□□ -0.63
SP1-202ENST00000426431 GDF11O95390 407 aa11.11□□□□□ -0.63
SP1-202ENST00000426431 PPFIA1Q13136 1202 aa11.11□□□□□ -0.63
SP1-202ENST00000426431 CCDC6Q16204 474 aa11.11□□□□□ -0.63
SP1-202ENST00000426431 RABL6Q3YEC7 729 aaPredicted RBP11.11□□□□□ -0.63
SP1-202ENST00000426431 STRIP1Q5VSL9 837 aa11.11□□□□□ -0.63
SP1-202ENST00000426431 DAAM2Q86T65 1068 aa11.11□□□□□ -0.63
SP1-202ENST00000426431 CNPY4Q8N129 248 aa11.11□□□□□ -0.63
SP1-202ENST00000426431 USP17L10C9JJH3 530 aa11.11□□□□□ -0.63
SP1-202ENST00000426431 FAM186BQ8IYM0 893 aa11.11□□□□□ -0.63
SP1-202ENST00000426431 NSUN6Q8TEA1 469 aaKnown RBP11.11□□□□□ -0.63
SP1-202ENST00000426431 THAP9Q9H5L6 903 aa11.11□□□□□ -0.63
SP1-202ENST00000426431 MRPL47Q9HD33 250 aaKnown RBP11.11□□□□□ -0.63
SP1-202ENST00000426431 HOMER3Q9NSC5 361 aa11.11□□□□□ -0.63
SP1-202ENST00000426431 AXIN2Q9Y2T1 843 aa11.11□□□□□ -0.63
SP1-202ENST00000426431 PTPRMP28827 1452 aa11.11□□□□□ -0.63
SP1-202ENST00000426431 LRRC7Q96NW7 1537 aa11.11□□□□□ -0.63
SP1-202ENST00000426431 RPS12P25398 132 aaKnown RBP11.11□□□□□ -0.63
SP1-202ENST00000426431 STYK1Q6J9G0 422 aa11.11□□□□□ -0.63
SP1-202ENST00000426431 TYW1BQ6NUM6 668 aa11.11□□□□□ -0.63
SP1-202ENST00000426431 SNX25Q9H3E2 840 aa11.11□□□□□ -0.63
SP1-202ENST00000426431 RWDD2AQ9UIY3 292 aa11.11□□□□□ -0.63
SP1-202ENST00000426431 GABPAQ06546 454 aa11.11□□□□□ -0.63
SP1-202ENST00000426431 TBC1D9BQ66K14 1250 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms