RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.55□□□□□ -1.2
NIF3L1-207ENST00000426253 MGAMO43451 1857 aa7.55□□□□□ -1.2
NIF3L1-207ENST00000426253 NCOR1O75376 2440 aa7.54□□□□□ -1.2
NIF3L1-207ENST00000426253 PFASO15067 1338 aa7.54□□□□□ -1.2
NIF3L1-207ENST00000426253 GADD45BO75293 160 aaPredicted RBP7.54□□□□□ -1.2
NIF3L1-207ENST00000426253 KRT37O76014 449 aa7.54□□□□□ -1.2
NIF3L1-207ENST00000426253 KIF4AO95239 1232 aa7.54□□□□□ -1.2
NIF3L1-207ENST00000426253 CYP2E1P05181 493 aaPredicted RBP7.54□□□□□ -1.2
NIF3L1-207ENST00000426253 NFKB1P19838 968 aa7.54□□□□□ -1.2
NIF3L1-207ENST00000426253 FGFR3P22607 806 aa7.54□□□□□ -1.2
NIF3L1-207ENST00000426253 PRDX5P30044 214 aa7.54□□□□□ -1.2
NIF3L1-207ENST00000426253 CACNB3P54284 484 aa7.54□□□□□ -1.2
NIF3L1-207ENST00000426253 PLAURQ03405 335 aa7.54□□□□□ -1.2
NIF3L1-207ENST00000426253 LRRC26Q2I0M4 334 aa7.54□□□□□ -1.2
NIF3L1-207ENST00000426253 SPTY2D1Q68D10 685 aaPredicted RBP7.54□□□□□ -1.2
NIF3L1-207ENST00000426253 ZGPATQ8N5A5 531 aaKnown RBP7.54□□□□□ -1.2
NIF3L1-207ENST00000426253 RNF34Q969K3 372 aa7.54□□□□□ -1.2
NIF3L1-207ENST00000426253 BCO2Q9BYV7 579 aa7.54□□□□□ -1.2
NIF3L1-207ENST00000426253 USP40Q9NVE5 1235 aa7.54□□□□□ -1.2
NIF3L1-207ENST00000426253 TMOD2Q9NZR1 351 aa7.54□□□□□ -1.2
NIF3L1-207ENST00000426253 ABCF2Q9UG63 623 aa7.54□□□□□ -1.2
NIF3L1-207ENST00000426253 RCAN3Q9UKA8 241 aa7.54□□□□□ -1.2
NIF3L1-207ENST00000426253 CSADQ9Y600 493 aa7.54□□□□□ -1.2
NIF3L1-207ENST00000426253 A0A1B0GUL6 1792 aa7.54□□□□□ -1.2
NIF3L1-207ENST00000426253 SALL1Q9NSC2 1324 aa7.53□□□□□ -1.2
NIF3L1-207ENST00000426253 CD33P20138 364 aa7.53□□□□□ -1.2
NIF3L1-207ENST00000426253 FANCCQ00597 558 aa7.53□□□□□ -1.2
NIF3L1-207ENST00000426253 HYAL2Q12891 473 aa7.53□□□□□ -1.2
NIF3L1-207ENST00000426253 SNAPC2Q13487 334 aa7.53□□□□□ -1.2
NIF3L1-207ENST00000426253 VGLL4Q14135 290 aa7.53□□□□□ -1.2
NIF3L1-207ENST00000426253 CCDC158Q5M9N0 1113 aa7.53□□□□□ -1.2
NIF3L1-207ENST00000426253 AKNAD1Q5T1N1 836 aa7.53□□□□□ -1.2
NIF3L1-207ENST00000426253 NXPE4Q6UWF7 544 aa7.53□□□□□ -1.2
NIF3L1-207ENST00000426253 SV2AQ7L0J3 742 aa7.53□□□□□ -1.2
NIF3L1-207ENST00000426253 FAM83AQ86UY5 434 aa7.53□□□□□ -1.2
NIF3L1-207ENST00000426253 METTL16Q86W50 562 aaKnown RBP7.53□□□□□ -1.2
NIF3L1-207ENST00000426253 BHMTQ93088 406 aa7.53□□□□□ -1.2
NIF3L1-207ENST00000426253 FBXL18Q96ME1 805 aa7.53□□□□□ -1.2
NIF3L1-207ENST00000426253 TEPSINQ96N21 525 aa7.53□□□□□ -1.2
NIF3L1-207ENST00000426253 TMEM39BQ9GZU3 492 aa7.53□□□□□ -1.2
NIF3L1-207ENST00000426253 GPR108Q9NPR9 543 aa7.53□□□□□ -1.2
NIF3L1-207ENST00000426253 HMG20BQ9P0W2 317 aa7.53□□□□□ -1.2
NIF3L1-207ENST00000426253 NOP58Q9Y2X3 529 aaKnown RBP7.53□□□□□ -1.2
NIF3L1-207ENST00000426253 A0A1W2PP55 124 aa7.52□□□□□ -1.21
NIF3L1-207ENST00000426253 PRR33A8MZF0 331 aa7.52□□□□□ -1.21
NIF3L1-207ENST00000426253 PDHXO00330 501 aa7.52□□□□□ -1.21
NIF3L1-207ENST00000426253 TNPO2O14787 897 aaKnown RBP7.52□□□□□ -1.21
NIF3L1-207ENST00000426253 UQCRFS1P1P0C7P4 283 aa7.52□□□□□ -1.21
NIF3L1-207ENST00000426253 ZNF76P36508 570 aa7.52□□□□□ -1.21
NIF3L1-207ENST00000426253 KCNQ1P51787 676 aa7.52□□□□□ -1.21
NIF3L1-207ENST00000426253 NRLP54845 237 aa7.52□□□□□ -1.21
NIF3L1-207ENST00000426253 CTBSQ01459 385 aa7.52□□□□□ -1.21
NIF3L1-207ENST00000426253 TFF2Q03403 129 aa7.52□□□□□ -1.21
NIF3L1-207ENST00000426253 RASGRF1Q13972 1273 aa7.52□□□□□ -1.21
NIF3L1-207ENST00000426253 GRM2Q14416 872 aa7.52□□□□□ -1.21
NIF3L1-207ENST00000426253 AAK1Q2M2I8 961 aa7.52□□□□□ -1.21
NIF3L1-207ENST00000426253 TNNI3KQ59H18 835 aa7.52□□□□□ -1.21
NIF3L1-207ENST00000426253 FKBP1CQ5VVH2 108 aa7.52□□□□□ -1.21
NIF3L1-207ENST00000426253 PEAR1Q5VY43 1037 aaPredicted RBP7.52□□□□□ -1.21
NIF3L1-207ENST00000426253 CDC42EP5Q6NZY7 148 aa7.52□□□□□ -1.21
NIF3L1-207ENST00000426253 CEP85Q6P2H3 762 aa7.52□□□□□ -1.21
NIF3L1-207ENST00000426253 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.52□□□□□ -1.21
NIF3L1-207ENST00000426253 DHX32Q7L7V1 743 aaKnown RBP7.52□□□□□ -1.21
NIF3L1-207ENST00000426253 RPAP2Q8IXW5 612 aaPredicted RBP7.52□□□□□ -1.21
NIF3L1-207ENST00000426253 VWA5B2Q8N398 1253 aa7.52□□□□□ -1.21
NIF3L1-207ENST00000426253 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.52□□□□□ -1.21
NIF3L1-207ENST00000426253 SPATA5Q8NB90 893 aa7.52□□□□□ -1.21
NIF3L1-207ENST00000426253 FAM151AQ8WW52 585 aa7.52□□□□□ -1.21
NIF3L1-207ENST00000426253 CCDC8Q9H0W5 538 aaPredicted RBP7.52□□□□□ -1.21
NIF3L1-207ENST00000426253 CHMP4BQ9H444 224 aaKnown RBP7.52□□□□□ -1.21
NIF3L1-207ENST00000426253 ZNF576Q9H609 170 aa7.52□□□□□ -1.21
NIF3L1-207ENST00000426253 KANSL3Q9P2N6 904 aa7.52□□□□□ -1.21
NIF3L1-207ENST00000426253 DDX19BQ9UMR2 479 aa7.52□□□□□ -1.21
NIF3L1-207ENST00000426253 DAGLAQ9Y4D2 1042 aa7.52□□□□□ -1.21
NIF3L1-207ENST00000426253 FPGT-TNNI3KV9GXZ4 949 aa7.52□□□□□ -1.21
NIF3L1-207ENST00000426253 LTBP2Q14767 1821 aa7.51□□□□□ -1.21
NIF3L1-207ENST00000426253 ECM29Q5VYK3 1845 aa7.51□□□□□ -1.21
NIF3L1-207ENST00000426253 LDHCP07864 332 aa7.51□□□□□ -1.21
NIF3L1-207ENST00000426253 ERCC5P28715 1186 aaPredicted RBP7.51□□□□□ -1.21
NIF3L1-207ENST00000426253 ST13P50502 369 aaKnown RBP7.51□□□□□ -1.21
NIF3L1-207ENST00000426253 MECOMQ03112 1051 aa7.51□□□□□ -1.21
NIF3L1-207ENST00000426253 TCP10Q12799 353 aa7.51□□□□□ -1.21
NIF3L1-207ENST00000426253 PCSK7Q16549 785 aa7.51□□□□□ -1.21
NIF3L1-207ENST00000426253 TTC39AQ5SRH9 613 aa7.51□□□□□ -1.21
NIF3L1-207ENST00000426253 MIGA2Q7L4E1 593 aa7.51□□□□□ -1.21
NIF3L1-207ENST00000426253 DZIP1Q86YF9 867 aaKnown RBP7.51□□□□□ -1.21
NIF3L1-207ENST00000426253 MICALL1Q8N3F8 863 aa7.51□□□□□ -1.21
NIF3L1-207ENST00000426253 CEP120Q8N960 986 aa7.51□□□□□ -1.21
NIF3L1-207ENST00000426253 GLIS3Q8NEA6 775 aa7.51□□□□□ -1.21
NIF3L1-207ENST00000426253 HOOK2Q96ED9 719 aa7.51□□□□□ -1.21
NIF3L1-207ENST00000426253 RNPC3Q96LT9 517 aaKnown RBP7.51□□□□□ -1.21
NIF3L1-207ENST00000426253 DBNDD2Q9BQY9 259 aa7.51□□□□□ -1.21
NIF3L1-207ENST00000426253 EHD4Q9H223 541 aa7.51□□□□□ -1.21
NIF3L1-207ENST00000426253 PRDM12Q9H4Q4 367 aa7.51□□□□□ -1.21
NIF3L1-207ENST00000426253 ZBTB40Q9NUA8 1239 aa7.51□□□□□ -1.21
NIF3L1-207ENST00000426253 RAI14Q9P0K7 980 aa7.51□□□□□ -1.21
NIF3L1-207ENST00000426253 LRP2BPQ9P2M1 347 aa7.51□□□□□ -1.21
NIF3L1-207ENST00000426253 PRR12Q9ULL5 1215 aa7.51□□□□□ -1.21
NIF3L1-207ENST00000426253 PDS5AQ29RF7 1337 aaKnown RBP7.51□□□□□ -1.21
NIF3L1-207ENST00000426253 USP17L7P0C7H9 530 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms