RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 ST18O60284 1047 aa16.74■□□□□ 0.27
HDAC6-206ENST00000426196 AMHP03971 560 aa16.74■□□□□ 0.27
HDAC6-206ENST00000426196 MMP3P08254 477 aa16.74■□□□□ 0.27
HDAC6-206ENST00000426196 CASTP20810 708 aaKnown RBP16.74■□□□□ 0.27
HDAC6-206ENST00000426196 PPARAQ07869 468 aa16.74■□□□□ 0.27
HDAC6-206ENST00000426196 EPC2Q52LR7 807 aa16.74■□□□□ 0.27
HDAC6-206ENST00000426196 TCEAL5Q5H9L2 206 aa16.74■□□□□ 0.27
HDAC6-206ENST00000426196 SYDE2Q5VT97 1194 aa16.74■□□□□ 0.27
HDAC6-206ENST00000426196 SIRT2Q8IXJ6 389 aa16.74■□□□□ 0.27
HDAC6-206ENST00000426196 MYOCDQ8IZQ8 938 aa16.74■□□□□ 0.27
HDAC6-206ENST00000426196 C7orf31Q8N865 590 aa16.74■□□□□ 0.27
HDAC6-206ENST00000426196 NSUN3Q9H649 340 aaKnown RBP16.74■□□□□ 0.27
HDAC6-206ENST00000426196 GTF2IRD1Q9UHL9 959 aa16.74■□□□□ 0.27
HDAC6-206ENST00000426196 PTPRZ1P23471 2315 aaPredicted RBP16.74■□□□□ 0.27
HDAC6-206ENST00000426196 MYH7BA7E2Y1 1941 aa16.73■□□□□ 0.27
HDAC6-206ENST00000426196 M0R2C6 588 aa16.73■□□□□ 0.27
HDAC6-206ENST00000426196 LGR5O75473 907 aa16.73■□□□□ 0.27
HDAC6-206ENST00000426196 ARIH2O95376 493 aa16.73■□□□□ 0.27
HDAC6-206ENST00000426196 GH1P01241 217 aa16.73■□□□□ 0.27
HDAC6-206ENST00000426196 IRS1P35568 1242 aa16.73■□□□□ 0.27
HDAC6-206ENST00000426196 SLC16A2P36021 539 aa16.73■□□□□ 0.27
HDAC6-206ENST00000426196 PTPN5P54829 565 aa16.73■□□□□ 0.27
HDAC6-206ENST00000426196 RPS6P62753 249 aaKnown RBP16.73■□□□□ 0.27
HDAC6-206ENST00000426196 HTRA4P83105 476 aaPredicted RBP16.73■□□□□ 0.27
HDAC6-206ENST00000426196 GPM6BQ13491 265 aa16.73■□□□□ 0.27
HDAC6-206ENST00000426196 SP7Q8TDD2 431 aaPredicted RBP16.73■□□□□ 0.27
HDAC6-206ENST00000426196 CLEC4DQ8WXI8 215 aa16.73■□□□□ 0.27
HDAC6-206ENST00000426196 KATNAL1Q9BW62 490 aa16.73■□□□□ 0.27
HDAC6-206ENST00000426196 LRRCC1Q9C099 1032 aa16.73■□□□□ 0.27
HDAC6-206ENST00000426196 ECHDC1Q9NTX5 307 aa16.73■□□□□ 0.27
HDAC6-206ENST00000426196 CLDND1Q9NY35 253 aa16.73■□□□□ 0.27
HDAC6-206ENST00000426196 EMSYQ7Z589 1322 aa16.72■□□□□ 0.27
HDAC6-206ENST00000426196 H3BNC9 293 aa16.72■□□□□ 0.27
HDAC6-206ENST00000426196 NCK2O43639 380 aa16.72■□□□□ 0.27
HDAC6-206ENST00000426196 PTK7Q13308 1070 aa16.72■□□□□ 0.27
HDAC6-206ENST00000426196 COL19A1Q14993 1142 aa16.72■□□□□ 0.27
HDAC6-206ENST00000426196 DGKDQ16760 1214 aa16.72■□□□□ 0.27
HDAC6-206ENST00000426196 HERC4Q5GLZ8 1057 aaPredicted RBP16.72■□□□□ 0.27
HDAC6-206ENST00000426196 TTBK2Q6IQ55 1244 aa16.72■□□□□ 0.27
HDAC6-206ENST00000426196 BTNL9Q6UXG8 535 aa16.72■□□□□ 0.27
HDAC6-206ENST00000426196 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.72■□□□□ 0.27
HDAC6-206ENST00000426196 ANKS1AQ92625 1134 aa16.72■□□□□ 0.27
HDAC6-206ENST00000426196 KAT2BQ92831 832 aa16.72■□□□□ 0.27
HDAC6-206ENST00000426196 GPATCH3Q96I76 525 aa16.72■□□□□ 0.27
HDAC6-206ENST00000426196 YME1L1Q96TA2 773 aa16.72■□□□□ 0.27
HDAC6-206ENST00000426196 PHOX2BQ99453 314 aa16.72■□□□□ 0.27
HDAC6-206ENST00000426196 PRRX2Q99811 253 aa16.72■□□□□ 0.27
HDAC6-206ENST00000426196 HDAC6Q9UBN7 1215 aa16.72■□□□□ 0.27
HDAC6-206ENST00000426196 MUTYHQ9UIF7 546 aa16.72■□□□□ 0.27
HDAC6-206ENST00000426196 ATG2AQ2TAZ0 1938 aa16.72■□□□□ 0.27
HDAC6-206ENST00000426196 ZFHX2Q9C0A1 2572 aaPredicted RBP16.71■□□□□ 0.27
HDAC6-206ENST00000426196 NMT2O60551 498 aa16.71■□□□□ 0.27
HDAC6-206ENST00000426196 MS4A1P11836 297 aa16.71■□□□□ 0.27
HDAC6-206ENST00000426196 ZNF618Q5T7W0 954 aa16.71■□□□□ 0.27
HDAC6-206ENST00000426196 CCDC62Q6P9F0 684 aa16.71■□□□□ 0.27
HDAC6-206ENST00000426196 CHST3Q7LGC8 479 aa16.71■□□□□ 0.27
HDAC6-206ENST00000426196 RPAINQ86UA6 219 aa16.71■□□□□ 0.27
HDAC6-206ENST00000426196 IL17RBQ9NRM6 502 aa16.71■□□□□ 0.27
HDAC6-206ENST00000426196 PSEN2P49810 448 aa16.7■□□□□ 0.26
HDAC6-206ENST00000426196 ARHGAP1Q07960 439 aa16.7■□□□□ 0.26
HDAC6-206ENST00000426196 TMEM192Q8IY95 271 aa16.7■□□□□ 0.26
HDAC6-206ENST00000426196 PRSS33Q8NF86 280 aa16.7■□□□□ 0.26
HDAC6-206ENST00000426196 ALG1Q9BT22 464 aa16.7■□□□□ 0.26
HDAC6-206ENST00000426196 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.7■□□□□ 0.26
HDAC6-206ENST00000426196 COL4A6Q14031 1691 aa16.69■□□□□ 0.26
HDAC6-206ENST00000426196 RANBP6O60518 1105 aaKnown RBP16.69■□□□□ 0.26
HDAC6-206ENST00000426196 MBTPS1Q14703 1052 aa16.69■□□□□ 0.26
HDAC6-206ENST00000426196 SMAD2Q15796 467 aaKnown RBP16.69■□□□□ 0.26
HDAC6-206ENST00000426196 PKN1Q16512 942 aa16.69■□□□□ 0.26
HDAC6-206ENST00000426196 LY6KQ17RY6 165 aa16.69■□□□□ 0.26
HDAC6-206ENST00000426196 TRIM71Q2Q1W2 868 aaKnown RBP16.69■□□□□ 0.26
HDAC6-206ENST00000426196 TRAF7Q6Q0C0 670 aa16.69■□□□□ 0.26
HDAC6-206ENST00000426196 SEPT14Q6ZU15 432 aa16.69■□□□□ 0.26
HDAC6-206ENST00000426196 FBXO11Q86XK2 927 aa16.69■□□□□ 0.26
HDAC6-206ENST00000426196 DBF4BQ8NFT6 615 aa16.69■□□□□ 0.26
HDAC6-206ENST00000426196 GPCPD1Q9NPB8 672 aa16.69■□□□□ 0.26
HDAC6-206ENST00000426196 ZBTB40Q9NUA8 1239 aa16.69■□□□□ 0.26
HDAC6-206ENST00000426196 DDX19BQ9UMR2 479 aa16.69■□□□□ 0.26
HDAC6-206ENST00000426196 FRMPD2Q68DX3 1309 aaPredicted RBP16.69■□□□□ 0.26
HDAC6-206ENST00000426196 WDR19Q8NEZ3 1342 aa16.69■□□□□ 0.26
HDAC6-206ENST00000426196 CCER2I3L3R5 266 aa16.68■□□□□ 0.26
HDAC6-206ENST00000426196 SMARCA5O60264 1052 aaPredicted RBP16.68■□□□□ 0.26
HDAC6-206ENST00000426196 MFSD10Q14728 455 aa16.68■□□□□ 0.26
HDAC6-206ENST00000426196 KIAA0753Q2KHM9 967 aa16.68■□□□□ 0.26
HDAC6-206ENST00000426196 BMP8AQ7Z5Y6 402 aa16.68■□□□□ 0.26
HDAC6-206ENST00000426196 RNF135Q8IUD6 432 aa16.68■□□□□ 0.26
HDAC6-206ENST00000426196 SUGP1Q8IWZ8 645 aaKnown RBP16.68■□□□□ 0.26
HDAC6-206ENST00000426196 DHX37Q8IY37 1157 aaKnown RBP16.68■□□□□ 0.26
HDAC6-206ENST00000426196 EDAQ92838 391 aa16.68■□□□□ 0.26
HDAC6-206ENST00000426196 CACNA1AO00555 2505 aa16.68■□□□□ 0.26
HDAC6-206ENST00000426196 MYH6P13533 1939 aa16.68■□□□□ 0.26
HDAC6-206ENST00000426196 RIF1Q5UIP0 2472 aaKnown RBP16.67■□□□□ 0.26
HDAC6-206ENST00000426196 RSPH10B2B2RC85 870 aa16.67■□□□□ 0.26
HDAC6-206ENST00000426196 F2P00734 622 aa16.67■□□□□ 0.26
HDAC6-206ENST00000426196 RSPH10BP0C881 870 aa16.67■□□□□ 0.26
HDAC6-206ENST00000426196 NOVP48745 357 aa16.67■□□□□ 0.26
HDAC6-206ENST00000426196 FOXK2Q01167 660 aa16.67■□□□□ 0.26
HDAC6-206ENST00000426196 CTDSPL2Q05D32 466 aa16.67■□□□□ 0.26
HDAC6-206ENST00000426196 MKRN4PQ13434 485 aaPredicted RBP16.67■□□□□ 0.26
HDAC6-206ENST00000426196 CLUL1Q15846 466 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms