RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 EMID1Q96A84 441 aaPredicted RBP21.29■■□□□ 1
MSH5-207ENST00000425703 TRIM43Q96BQ3 446 aaPredicted RBP21.29■■□□□ 1
MSH5-207ENST00000425703 DDX41Q9UJV9 622 aaKnown RBP21.29■■□□□ 1
MSH5-207ENST00000425703 CNTNAP5Q8WYK1 1306 aa21.29■■□□□ 1
MSH5-207ENST00000425703 NID2Q14112 1375 aa21.28■■□□□ 1
MSH5-207ENST00000425703 hCG_1984214I3L0E3 225 aa21.28■■□□□ 1
MSH5-207ENST00000425703 MEIS2O14770 477 aa21.28■■□□□ 1
MSH5-207ENST00000425703 GH1P01241 217 aa21.28■■□□□ 1
MSH5-207ENST00000425703 TGFB3P10600 412 aa21.28■■□□□ 1
MSH5-207ENST00000425703 CPA1P15085 419 aa21.28■■□□□ 1
MSH5-207ENST00000425703 CASTP20810 708 aaKnown RBP21.28■■□□□ 1
MSH5-207ENST00000425703 ITGA7Q13683 1181 aa21.28■■□□□ 1
MSH5-207ENST00000425703 SH3RF1Q7Z6J0 888 aa21.28■■□□□ 1
MSH5-207ENST00000425703 TDHQ8IZJ6 230 aa21.28■■□□□ 1
MSH5-207ENST00000425703 CCDC82Q8N4S0 544 aa21.28■■□□□ 1
MSH5-207ENST00000425703 ZNF713Q8N859 430 aaPredicted RBP21.28■■□□□ 1
MSH5-207ENST00000425703 TM6SF1Q9BZW5 370 aa21.28■■□□□ 1
MSH5-207ENST00000425703 PSTPIP2Q9H939 334 aa21.28■■□□□ 1
MSH5-207ENST00000425703 ZSWIM6Q9HCJ5 1215 aa21.28■■□□□ 1
MSH5-207ENST00000425703 FAM217BQ9NTX9 383 aaPredicted RBP21.28■■□□□ 1
MSH5-207ENST00000425703 TMEM39AQ9NV64 488 aa21.28■■□□□ 1
MSH5-207ENST00000425703 TLR3O15455 904 aaKnown RBP21.27■■□□□ 1
MSH5-207ENST00000425703 EIF5BO60841 1220 aaKnown RBP21.27■■□□□ 1
MSH5-207ENST00000425703 RGS20O76081 388 aa21.27■■□□□ 1
MSH5-207ENST00000425703 SLC34A2O95436 690 aa21.27■■□□□ 1
MSH5-207ENST00000425703 MYCLP12524 364 aaPredicted RBP21.27■■□□□ 1
MSH5-207ENST00000425703 EVCP57679 992 aa21.27■■□□□ 1
MSH5-207ENST00000425703 ARHGAP1Q07960 439 aa21.27■■□□□ 1
MSH5-207ENST00000425703 XRRA1Q6P2D8 792 aa21.27■■□□□ 1
MSH5-207ENST00000425703 RUFY3Q7L099 469 aa21.27■■□□□ 1
MSH5-207ENST00000425703 FAM126BQ8IXS8 530 aa21.27■■□□□ 1
MSH5-207ENST00000425703 SMARCC2Q8TAQ2 1214 aa21.27■■□□□ 1
MSH5-207ENST00000425703 COPS5Q92905 334 aa21.27■■□□□ 1
MSH5-207ENST00000425703 BRF1Q92994 677 aa21.27■■□□□ 1
MSH5-207ENST00000425703 MTG1Q9BT17 334 aaPredicted RBP21.27■■□□□ 1
MSH5-207ENST00000425703 TBX21Q9UL17 535 aa21.27■■□□□ 1
MSH5-207ENST00000425703 MRVI1Q9Y6F6 885 aa21.27■■□□□ 1
MSH5-207ENST00000425703 GRIN2DO15399 1336 aa21.27■□□□□ 0.99
MSH5-207ENST00000425703 METAP2P50579 478 aaKnown RBP eCLIP21.26■□□□□ 0.99
MSH5-207ENST00000425703 APOBRQ0VD83 1088 aa21.26■□□□□ 0.99
MSH5-207ENST00000425703 LY6KQ17RY6 165 aa21.26■□□□□ 0.99
MSH5-207ENST00000425703 PPP1R18Q6NYC8 613 aa21.26■□□□□ 0.99
MSH5-207ENST00000425703 USP17L6PQ6QN14 398 aa21.26■□□□□ 0.99
MSH5-207ENST00000425703 IL31RAQ8NI17 732 aa21.26■□□□□ 0.99
MSH5-207ENST00000425703 hCG_1642624A0A1W2PR95 340 aa21.25■□□□□ 0.99
MSH5-207ENST00000425703 CD4P01730 458 aa21.25■□□□□ 0.99
MSH5-207ENST00000425703 MYL3P08590 195 aa21.25■□□□□ 0.99
MSH5-207ENST00000425703 RAG1P15918 1043 aa21.25■□□□□ 0.99
MSH5-207ENST00000425703 CDC27P30260 824 aa21.25■□□□□ 0.99
MSH5-207ENST00000425703 LAMC2Q13753 1193 aa21.25■□□□□ 0.99
MSH5-207ENST00000425703 GNPTABQ3T906 1256 aa21.25■□□□□ 0.99
MSH5-207ENST00000425703 HEATR3Q7Z4Q2 680 aa21.25■□□□□ 0.99
MSH5-207ENST00000425703 BADQ92934 168 aa21.25■□□□□ 0.99
MSH5-207ENST00000425703 CYP46A1Q9Y6A2 500 aa21.25■□□□□ 0.99
MSH5-207ENST00000425703 V9GY48 417 aaPredicted RBP21.25■□□□□ 0.99
MSH5-207ENST00000425703 ITGB8P26012 769 aa21.24■□□□□ 0.99
MSH5-207ENST00000425703 LRIT3Q3SXY7 679 aa21.24■□□□□ 0.99
MSH5-207ENST00000425703 PCNX4Q63HM2 1172 aa21.24■□□□□ 0.99
MSH5-207ENST00000425703 AFG1LQ8WV93 481 aa21.24■□□□□ 0.99
MSH5-207ENST00000425703 INPP4AQ96PE3 977 aaPredicted RBP21.24■□□□□ 0.99
MSH5-207ENST00000425703 NAP1L2Q9ULW6 460 aaPredicted RBP21.24■□□□□ 0.99
MSH5-207ENST00000425703 LAMA3Q16787 3333 aa21.23■□□□□ 0.99
MSH5-207ENST00000425703 TIMP1P01033 207 aa21.23■□□□□ 0.99
MSH5-207ENST00000425703 MMP3P08254 477 aa21.23■□□□□ 0.99
MSH5-207ENST00000425703 ICAM3P32942 547 aa21.23■□□□□ 0.99
MSH5-207ENST00000425703 ADD1P35611 737 aaKnown RBP21.23■□□□□ 0.99
MSH5-207ENST00000425703 PSMC6P62333 389 aa21.23■□□□□ 0.99
MSH5-207ENST00000425703 MRPS9P82933 396 aaKnown RBP21.23■□□□□ 0.99
MSH5-207ENST00000425703 WWC2Q6AWC2 1192 aa21.23■□□□□ 0.99
MSH5-207ENST00000425703 PPTC7Q8NI37 304 aa21.23■□□□□ 0.99
MSH5-207ENST00000425703 GLT8D2Q9H1C3 349 aa21.23■□□□□ 0.99
MSH5-207ENST00000425703 LTBP2Q14767 1821 aa21.22■□□□□ 0.99
MSH5-207ENST00000425703 HOXD8P13378 290 aaPredicted RBP21.22■□□□□ 0.99
MSH5-207ENST00000425703 ANAPC15P60006 121 aa21.22■□□□□ 0.99
MSH5-207ENST00000425703 PTPN11Q06124 597 aaPredicted RBP21.22■□□□□ 0.99
MSH5-207ENST00000425703 DGKDQ16760 1214 aa21.22■□□□□ 0.99
MSH5-207ENST00000425703 CELF3Q5SZQ8 465 aaKnown RBP21.22■□□□□ 0.99
MSH5-207ENST00000425703 MYSM1Q5VVJ2 828 aa21.22■□□□□ 0.99
MSH5-207ENST00000425703 NFRKBQ6P4R8 1299 aa21.22■□□□□ 0.99
MSH5-207ENST00000425703 DHX37Q8IY37 1157 aaKnown RBP21.22■□□□□ 0.99
MSH5-207ENST00000425703 GPKOWQ92917 476 aaPredicted RBP eCLIP21.22■□□□□ 0.994e-8■■■■□ 19.5
MSH5-207ENST00000425703 ALDH8A1Q9H2A2 487 aaPredicted RBP21.22■□□□□ 0.99
MSH5-207ENST00000425703 RIC8AQ9NPQ8 531 aa21.22■□□□□ 0.99
MSH5-207ENST00000425703 BARHL2Q9NY43 387 aa21.22■□□□□ 0.99
MSH5-207ENST00000425703 PCDH10Q9P2E7 1040 aa21.22■□□□□ 0.99
MSH5-207ENST00000425703 KIAA1217Q5T5P2 1943 aa21.21■□□□□ 0.99
MSH5-207ENST00000425703 SPDYE3A6NKU9 549 aa21.21■□□□□ 0.99
MSH5-207ENST00000425703 SPATA31C2B4DYI2 1134 aa21.21■□□□□ 0.99
MSH5-207ENST00000425703 SUPT20HL2P0C7V6 817 aa21.21■□□□□ 0.99
MSH5-207ENST00000425703 NAPAP54920 295 aa21.21■□□□□ 0.99
MSH5-207ENST00000425703 MFSD5Q6N075 450 aa21.21■□□□□ 0.99
MSH5-207ENST00000425703 STXBP3O00186 592 aa21.2■□□□□ 0.98
MSH5-207ENST00000425703 FIBPO43427 364 aa21.2■□□□□ 0.98
MSH5-207ENST00000425703 PPFIA4O75335 1185 aa21.2■□□□□ 0.98
MSH5-207ENST00000425703 UBA1P22314 1058 aaKnown RBP21.2■□□□□ 0.98
MSH5-207ENST00000425703 PDIA3P30101 505 aaKnown RBP21.2■□□□□ 0.98
MSH5-207ENST00000425703 FPGSQ05932 587 aa21.2■□□□□ 0.98
MSH5-207ENST00000425703 TOB2Q14106 344 aaPredicted RBP21.2■□□□□ 0.98
MSH5-207ENST00000425703 PFKFB3Q16875 520 aaPredicted RBP21.2■□□□□ 0.98
MSH5-207ENST00000425703 NBPF20Q3BBV1 942 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms