RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 SAMSN1Q9NSI8 373 aaKnown RBP29.75■■■□□ 2.35
LDB1-202ENST00000425280 ZNF76P36508 570 aa29.74■■■□□ 2.35
LDB1-202ENST00000425280 DHX8Q14562 1220 aaKnown RBP29.74■■■□□ 2.35
LDB1-202ENST00000425280 NOL9Q5SY16 702 aaKnown RBP29.74■■■□□ 2.35
LDB1-202ENST00000425280 HYIQ5T013 277 aa29.74■■■□□ 2.35
LDB1-202ENST00000425280 CYP2W1Q8TAV3 490 aa29.74■■■□□ 2.35
LDB1-202ENST00000425280 SPIRE1Q08AE8 756 aa29.73■■■□□ 2.35
LDB1-202ENST00000425280 KCNK18Q7Z418 384 aa29.73■■■□□ 2.35
LDB1-202ENST00000425280 FAM20AQ96MK3 541 aa29.73■■■□□ 2.35
LDB1-202ENST00000425280 PARP14Q460N5 1801 aa29.73■■■□□ 2.35
LDB1-202ENST00000425280 IGLV3-22A0A075B6J6 115 aa29.73■■■□□ 2.35
LDB1-202ENST00000425280 MSH4O15457 936 aa29.73■■■□□ 2.35
LDB1-202ENST00000425280 CBFA2T2O43439 604 aa29.73■■■□□ 2.35
LDB1-202ENST00000425280 CCT6AP40227 531 aaKnown RBP29.73■■■□□ 2.35
LDB1-202ENST00000425280 STAT3P40763 770 aa29.73■■■□□ 2.35
LDB1-202ENST00000425280 PRCPP42785 496 aa29.73■■■□□ 2.35
LDB1-202ENST00000425280 HSD17B4P51659 736 aa29.73■■■□□ 2.35
LDB1-202ENST00000425280 CPXCR1Q8N123 301 aa29.73■■■□□ 2.35
LDB1-202ENST00000425280 CLEC4DQ8WXI8 215 aa29.73■■■□□ 2.35
LDB1-202ENST00000425280 RAVER2Q9HCJ3 691 aaKnown RBP29.73■■■□□ 2.35
LDB1-202ENST00000425280 ASIC1P78348 528 aa29.72■■■□□ 2.35
LDB1-202ENST00000425280 NAP1L5Q96NT1 182 aaPredicted RBP29.72■■■□□ 2.35
LDB1-202ENST00000425280 EHMT1Q9H9B1 1298 aa29.72■■■□□ 2.35
LDB1-202ENST00000425280 RWDD2AQ9UIY3 292 aa29.72■■■□□ 2.35
LDB1-202ENST00000425280 KDM3AQ9Y4C1 1321 aa29.72■■■□□ 2.35
LDB1-202ENST00000425280 USP2O75604 605 aaPredicted RBP29.72■■■□□ 2.35
LDB1-202ENST00000425280 DLK2Q6UY11 383 aa29.72■■■□□ 2.35
LDB1-202ENST00000425280 FILIP1Q7Z7B0 1213 aa29.72■■■□□ 2.35
LDB1-202ENST00000425280 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29.72■■■□□ 2.352e-13■□□□□ 9
LDB1-202ENST00000425280 C12orf42Q96LP6 360 aa29.72■■■□□ 2.35
LDB1-202ENST00000425280 NFIBO00712 420 aa29.71■■■□□ 2.35
LDB1-202ENST00000425280 SLC26A4O43511 780 aa29.71■■■□□ 2.35
LDB1-202ENST00000425280 CDK11BP21127 795 aaKnown RBP29.71■■■□□ 2.35
LDB1-202ENST00000425280 PAK1Q13153 545 aa29.71■■■□□ 2.35
LDB1-202ENST00000425280 PRKG1Q13976 671 aa29.71■■■□□ 2.35
LDB1-202ENST00000425280 ADSSL1Q8N142 457 aa29.71■■■□□ 2.35
LDB1-202ENST00000425280 GIMAP8Q8ND71 665 aaPredicted RBP29.71■■■□□ 2.35
LDB1-202ENST00000425280 MYMKA6NI61 221 aa29.7■■■□□ 2.35
LDB1-202ENST00000425280 HMGCS2P54868 508 aa29.7■■■□□ 2.35
LDB1-202ENST00000425280 UBXN2AP68543 259 aa29.7■■■□□ 2.35
LDB1-202ENST00000425280 NELFBQ8WX92 580 aa29.7■■■□□ 2.35
LDB1-202ENST00000425280 IMPACTQ9P2X3 320 aa29.7■■■□□ 2.35
LDB1-202ENST00000425280 MAPK8IP1Q9UQF2 711 aa29.7■■■□□ 2.35
LDB1-202ENST00000425280 C19orf81C9J6K1 198 aa29.7■■■□□ 2.34
LDB1-202ENST00000425280 ALAS1P13196 640 aa29.7■■■□□ 2.34
LDB1-202ENST00000425280 LRMPQ12912 555 aa29.7■■■□□ 2.34
LDB1-202ENST00000425280 TMC6Q7Z403 805 aa29.7■■■□□ 2.34
LDB1-202ENST00000425280 CACTINQ8WUQ7 758 aaKnown RBP29.7■■■□□ 2.34
LDB1-202ENST00000425280 CCDC47Q96A33 483 aaKnown RBP29.7■■■□□ 2.34
LDB1-202ENST00000425280 DCPSQ96C86 337 aaKnown RBP29.7■■■□□ 2.34
LDB1-202ENST00000425280 NT5C3AQ9H0P0 336 aa29.7■■■□□ 2.34
LDB1-202ENST00000425280 EXOC1Q9NV70 894 aa29.7■■■□□ 2.34
LDB1-202ENST00000425280 COBLO75128 1261 aa29.69■■■□□ 2.34
LDB1-202ENST00000425280 ZBED4O75132 1171 aa29.69■■■□□ 2.34
LDB1-202ENST00000425280 CDKAL1Q5VV42 579 aa29.69■■■□□ 2.34
LDB1-202ENST00000425280 PYCARDQ9ULZ3 195 aa29.69■■■□□ 2.34
LDB1-202ENST00000425280 GHRHRQ02643 423 aa29.68■■■□□ 2.34
LDB1-202ENST00000425280 INTS13Q9NVM9 706 aa29.68■■■□□ 2.34
LDB1-202ENST00000425280 ADM5C9JUS6 153 aa29.68■■■□□ 2.34
LDB1-202ENST00000425280 VWA5AO00534 786 aa29.68■■■□□ 2.34
LDB1-202ENST00000425280 PDE4DQ08499 809 aa29.68■■■□□ 2.34
LDB1-202ENST00000425280 ARID5BQ14865 1188 aa29.68■■■□□ 2.34
LDB1-202ENST00000425280 MCF2L2Q86YR7 1114 aa29.68■■■□□ 2.34
LDB1-202ENST00000425280 ATG4CQ96DT6 458 aa29.68■■■□□ 2.34
LDB1-202ENST00000425280 COL20A1Q9P218 1284 aa29.68■■■□□ 2.34
LDB1-202ENST00000425280 VAV3Q9UKW4 847 aa29.68■■■□□ 2.34
LDB1-202ENST00000425280 CTDP1Q9Y5B0 961 aaPredicted RBP29.68■■■□□ 2.34
LDB1-202ENST00000425280 RLFQ13129 1914 aa29.67■■■□□ 2.34
LDB1-202ENST00000425280 FDX1P10109 184 aa29.67■■■□□ 2.34
LDB1-202ENST00000425280 MUM1L1Q5H9M0 696 aa29.67■■■□□ 2.34
LDB1-202ENST00000425280 NCAPH2Q6IBW4 605 aa29.67■■■□□ 2.34
LDB1-202ENST00000425280 SULF1Q8IWU6 871 aa29.67■■■□□ 2.34
LDB1-202ENST00000425280 WNK4Q96J92 1243 aa29.67■■■□□ 2.34
LDB1-202ENST00000425280 KIAA1024Q9UPX6 916 aa29.67■■■□□ 2.34
LDB1-202ENST00000425280 AFG3L2Q9Y4W6 797 aa29.67■■■□□ 2.34
LDB1-202ENST00000425280 POTEB3A0JP26 581 aa29.67■■■□□ 2.34
LDB1-202ENST00000425280 POTECB2RU33 542 aa29.67■■■□□ 2.34
LDB1-202ENST00000425280 MED24O75448 989 aa29.67■■■□□ 2.34
LDB1-202ENST00000425280 CNNM4Q6P4Q7 775 aa29.67■■■□□ 2.34
LDB1-202ENST00000425280 POTEBQ6S5H4 581 aa29.67■■■□□ 2.34
LDB1-202ENST00000425280 LRRC8AQ8IWT6 810 aa29.67■■■□□ 2.34
LDB1-202ENST00000425280 LRRC27Q9C0I9 530 aa29.67■■■□□ 2.34
LDB1-202ENST00000425280 HOMER2Q9NSB8 354 aa29.67■■■□□ 2.34
LDB1-202ENST00000425280 TPD52L1Q16890 204 aaPredicted RBP29.65■■■□□ 2.34
LDB1-202ENST00000425280 CEP55Q53EZ4 464 aa29.65■■■□□ 2.34
LDB1-202ENST00000425280 HAUS3Q68CZ6 603 aa29.65■■■□□ 2.34
LDB1-202ENST00000425280 PPP1R3FQ6ZSY5 799 aaPredicted RBP29.65■■■□□ 2.34
LDB1-202ENST00000425280 ERMNQ8TAM6 284 aa29.65■■■□□ 2.34
LDB1-202ENST00000425280 PNMA2Q9UL42 364 aa29.65■■■□□ 2.34
LDB1-202ENST00000425280 SNCAIPQ9Y6H5 919 aa29.65■■■□□ 2.34
LDB1-202ENST00000425280 RPTORQ8N122 1335 aa29.65■■■□□ 2.34
LDB1-202ENST00000425280 PVALEFA0A1B0GWK0 134 aa29.65■■■□□ 2.34
LDB1-202ENST00000425280 GSDMDP57764 484 aa29.65■■■□□ 2.34
LDB1-202ENST00000425280 UNC13DQ70J99 1090 aa29.65■■■□□ 2.34
LDB1-202ENST00000425280 DYMQ7RTS9 669 aa29.65■■■□□ 2.34
LDB1-202ENST00000425280 APTXQ7Z2E3 356 aaKnown RBP29.65■■■□□ 2.34
LDB1-202ENST00000425280 VSTM4Q8IW00 320 aa29.65■■■□□ 2.34
LDB1-202ENST00000425280 KIAA1524Q8TCG1 905 aa29.65■■■□□ 2.34
LDB1-202ENST00000425280 GTPBP4Q9BZE4 634 aaKnown RBP29.65■■■□□ 2.34
LDB1-202ENST00000425280 RBBP6Q7Z6E9 1792 aaKnown RBP29.64■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms