RNA–Protein interactions for RNA: ENST00000424307.5

PMS1-210, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-210ENST00000424307 EHMT1Q9H9B1 1298 aa2.35□□□□□ -2.03
PMS1-210ENST00000424307 AP5S1Q9NUS5 200 aa2.35□□□□□ -2.03
PMS1-210ENST00000424307 HCFC2Q9Y5Z7 792 aa2.35□□□□□ -2.03
PMS1-210ENST00000424307 UNCXA6NJT0 531 aa2.34□□□□□ -2.03
PMS1-210ENST00000424307 TNFRSF10CO14798 259 aa2.34□□□□□ -2.03
PMS1-210ENST00000424307 MCM4P33991 863 aa2.34□□□□□ -2.03
PMS1-210ENST00000424307 ZC3H6P61129 1189 aaKnown RBP2.34□□□□□ -2.03
PMS1-210ENST00000424307 AUHQ13825 339 aaKnown RBP2.34□□□□□ -2.03
PMS1-210ENST00000424307 ETV3LQ6ZN32 361 aa2.34□□□□□ -2.03
PMS1-210ENST00000424307 HS2ST1Q7LGA3 356 aa2.34□□□□□ -2.03
PMS1-210ENST00000424307 METTL16Q86W50 562 aaKnown RBP2.34□□□□□ -2.03
PMS1-210ENST00000424307 REXO1Q8N1G1 1221 aaKnown RBP2.34□□□□□ -2.03
PMS1-210ENST00000424307 LGR4Q9BXB1 951 aa2.34□□□□□ -2.03
PMS1-210ENST00000424307 GFOD1Q9NXC2 390 aa2.34□□□□□ -2.03
PMS1-210ENST00000424307 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP2.34□□□□□ -2.03
PMS1-210ENST00000424307 KIAA1522Q9P206 1035 aaPredicted RBP2.34□□□□□ -2.03
PMS1-210ENST00000424307 FBLN5Q9UBX5 448 aa2.34□□□□□ -2.03
PMS1-210ENST00000424307 FHOD1Q9Y613 1164 aa2.34□□□□□ -2.03
PMS1-210ENST00000424307 B4GALT3O60512 393 aa2.34□□□□□ -2.04
PMS1-210ENST00000424307 CYP1A1P04798 512 aaPredicted RBP2.34□□□□□ -2.04
PMS1-210ENST00000424307 C8BP07358 591 aa2.34□□□□□ -2.04
PMS1-210ENST00000424307 NME1P15531 152 aaKnown RBP2.34□□□□□ -2.04
PMS1-210ENST00000424307 ZNF28P17035 718 aa2.34□□□□□ -2.04
PMS1-210ENST00000424307 MFAP1P55081 439 aaKnown RBP2.34□□□□□ -2.04
PMS1-210ENST00000424307 PTH1RQ03431 593 aa2.34□□□□□ -2.04
PMS1-210ENST00000424307 INTS3Q68E01 1043 aaKnown RBP2.34□□□□□ -2.04
PMS1-210ENST00000424307 SLITRK4Q8IW52 837 aa2.34□□□□□ -2.04
PMS1-210ENST00000424307 FAM126BQ8IXS8 530 aa2.34□□□□□ -2.04
PMS1-210ENST00000424307 SPATA3Q8NHX4 192 aa2.34□□□□□ -2.04
PMS1-210ENST00000424307 ZNF428Q96B54 188 aa2.34□□□□□ -2.04
PMS1-210ENST00000424307 GORASP1Q9BQQ3 440 aa2.34□□□□□ -2.04
PMS1-210ENST00000424307 SPON2Q9BUD6 331 aa2.34□□□□□ -2.04
PMS1-210ENST00000424307 AP5M1Q9H0R1 490 aa2.34□□□□□ -2.04
PMS1-210ENST00000424307 IKZF4Q9H2S9 585 aa2.34□□□□□ -2.04
PMS1-210ENST00000424307 PCDHB10Q9UN67 800 aa2.34□□□□□ -2.04
PMS1-210ENST00000424307 ZFR2Q9UPR6 939 aaKnown RBP2.34□□□□□ -2.04
PMS1-210ENST00000424307 DIS3Q9Y2L1 958 aaKnown RBP2.34□□□□□ -2.04
PMS1-210ENST00000424307 NPIPB8E9PQR5 432 aa2.33□□□□□ -2.04
PMS1-210ENST00000424307 CBFA2T2O43439 604 aa2.33□□□□□ -2.04
PMS1-210ENST00000424307 ADH4P08319 380 aa2.33□□□□□ -2.04
PMS1-210ENST00000424307 GPR162Q16538 588 aa2.33□□□□□ -2.04
PMS1-210ENST00000424307 AXDND1Q5T1B0 1012 aaPredicted RBP2.33□□□□□ -2.04
PMS1-210ENST00000424307 EEF1DP3Q658K8 133 aa2.33□□□□□ -2.04
PMS1-210ENST00000424307 MRGPRGQ86SM5 289 aa2.33□□□□□ -2.04
PMS1-210ENST00000424307 TAB3Q8N5C8 712 aaPredicted RBP2.33□□□□□ -2.04
PMS1-210ENST00000424307 Q8TCH9 128 aa2.33□□□□□ -2.04
PMS1-210ENST00000424307 SEC14L1Q92503 715 aa2.33□□□□□ -2.04
PMS1-210ENST00000424307 BRF1Q92994 677 aa2.33□□□□□ -2.04
PMS1-210ENST00000424307 MBD6Q96DN6 1003 aa2.33□□□□□ -2.04
PMS1-210ENST00000424307 DDX11Q96FC9 970 aa2.33□□□□□ -2.04
PMS1-210ENST00000424307 MCMBPQ9BTE3 642 aa2.33□□□□□ -2.04
PMS1-210ENST00000424307 BARX1Q9HBU1 254 aaPredicted RBP2.33□□□□□ -2.04
PMS1-210ENST00000424307 JADE2Q9NQC1 790 aa2.33□□□□□ -2.04
PMS1-210ENST00000424307 ZNRF3Q9ULT6 936 aa2.33□□□□□ -2.04
PMS1-210ENST00000424307 MEIS3P2A8K0S8 358 aa2.33□□□□□ -2.04
PMS1-210ENST00000424307 H0Y8X5 98 aa2.33□□□□□ -2.04
PMS1-210ENST00000424307 NPHS1O60500 1241 aa2.33□□□□□ -2.04
PMS1-210ENST00000424307 TP53P04637 393 aaPredicted RBP2.33□□□□□ -2.04
PMS1-210ENST00000424307 SLC6A11P48066 632 aa2.33□□□□□ -2.04
PMS1-210ENST00000424307 LSM12Q3MHD2 195 aaKnown RBP2.33□□□□□ -2.04
PMS1-210ENST00000424307 MCTP2Q6DN12 878 aa2.33□□□□□ -2.04
PMS1-210ENST00000424307 KIAA0825Q8IV33 1275 aa2.33□□□□□ -2.04
PMS1-210ENST00000424307 FAM169BQ8N8A8 192 aa2.33□□□□□ -2.04
PMS1-210ENST00000424307 IGDCC4Q8TDY8 1250 aa2.33□□□□□ -2.04
PMS1-210ENST00000424307 FAM89AQ96GI7 184 aa2.33□□□□□ -2.04
PMS1-210ENST00000424307 CLIC6Q96NY7 704 aa2.33□□□□□ -2.04
PMS1-210ENST00000424307 MTA3Q9BTC8 594 aa2.33□□□□□ -2.04
PMS1-210ENST00000424307 MKRN2Q9H000 416 aaKnown RBP2.33□□□□□ -2.04
PMS1-210ENST00000424307 IFNGR1P15260 489 aa2.32□□□□□ -2.04
PMS1-210ENST00000424307 DNAJA1P31689 397 aaKnown RBP2.32□□□□□ -2.04
PMS1-210ENST00000424307 ZNF76P36508 570 aa2.32□□□□□ -2.04
PMS1-210ENST00000424307 MC3RP41968 323 aa2.32□□□□□ -2.04
PMS1-210ENST00000424307 NRN1LQ496H8 165 aa2.32□□□□□ -2.04
PMS1-210ENST00000424307 TMCO4Q5TGY1 634 aa2.32□□□□□ -2.04
PMS1-210ENST00000424307 ZNF585AQ6P3V2 769 aa2.32□□□□□ -2.04
PMS1-210ENST00000424307 NKD1Q969G9 470 aa2.32□□□□□ -2.04
PMS1-210ENST00000424307 TMEM209Q96SK2 561 aa2.32□□□□□ -2.04
PMS1-210ENST00000424307 NT5C1AQ9BXI3 368 aa2.32□□□□□ -2.04
PMS1-210ENST00000424307 L2HGDHQ9H9P8 463 aa2.32□□□□□ -2.04
PMS1-210ENST00000424307 RXFP1Q9HBX9 757 aa2.32□□□□□ -2.04
PMS1-210ENST00000424307 DDX41Q9UJV9 622 aaKnown RBP2.32□□□□□ -2.04
PMS1-210ENST00000424307 TMEM191CA6NGB0 347 aa2.32□□□□□ -2.04
PMS1-210ENST00000424307 DDX3XO00571 662 aaKnown RBP eCLIP2.32□□□□□ -2.04
PMS1-210ENST00000424307 NARSO43776 548 aaKnown RBP2.32□□□□□ -2.04
PMS1-210ENST00000424307 MAKP20794 623 aa2.32□□□□□ -2.04
PMS1-210ENST00000424307 HDLBPQ00341 1268 aaKnown RBP2.32□□□□□ -2.04
PMS1-210ENST00000424307 PAK2Q13177 524 aa2.32□□□□□ -2.04
PMS1-210ENST00000424307 SMAD4Q13485 552 aaKnown RBP2.32□□□□□ -2.04
PMS1-210ENST00000424307 CHRNA2Q15822 529 aa2.32□□□□□ -2.04
PMS1-210ENST00000424307 WWC2Q6AWC2 1192 aa2.32□□□□□ -2.04
PMS1-210ENST00000424307 PALM2Q8IXS6 379 aa2.32□□□□□ -2.04
PMS1-210ENST00000424307 KBTBD2Q8IY47 623 aa2.32□□□□□ -2.04
PMS1-210ENST00000424307 RNF34Q969K3 372 aa2.32□□□□□ -2.04
PMS1-210ENST00000424307 SYT3Q9BQG1 590 aa2.32□□□□□ -2.04
PMS1-210ENST00000424307 KRTAP1-5Q9BYS1 174 aa2.32□□□□□ -2.04
PMS1-210ENST00000424307 PDGFDQ9GZP0 370 aaPredicted RBP2.32□□□□□ -2.04
PMS1-210ENST00000424307 CSRNP2Q9H175 543 aa2.32□□□□□ -2.04
PMS1-210ENST00000424307 GINM1Q9NU53 330 aa2.32□□□□□ -2.04
PMS1-210ENST00000424307 HSPBP1Q9NZL4 362 aa2.32□□□□□ -2.04
PMS1-210ENST00000424307 SUCOQ9UBS9 1254 aaKnown RBP2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms