RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 STK4Q13043 487 aa15.93■□□□□ 0.14
MSH5-206ENST00000423982 KCTD19Q17RG1 926 aaPredicted RBP15.93■□□□□ 0.14
MSH5-206ENST00000423982 FBXW10Q5XX13 1052 aa15.93■□□□□ 0.14
MSH5-206ENST00000423982 SPTY2D1Q68D10 685 aaPredicted RBP15.93■□□□□ 0.14
MSH5-206ENST00000423982 CNOT6LQ96LI5 555 aaKnown RBP15.93■□□□□ 0.14
MSH5-206ENST00000423982 SNX12Q9UMY4 172 aa15.93■□□□□ 0.14
MSH5-206ENST00000423982 PSMA7O14818 248 aa15.93■□□□□ 0.14
MSH5-206ENST00000423982 CCDC178Q5BJE1 867 aa15.93■□□□□ 0.14
MSH5-206ENST00000423982 MIIPQ5JXC2 388 aa15.93■□□□□ 0.14
MSH5-206ENST00000423982 KCTD16Q68DU8 428 aa15.93■□□□□ 0.14
MSH5-206ENST00000423982 STAG2Q8N3U4 1231 aa15.93■□□□□ 0.14
MSH5-206ENST00000423982 PURBQ96QR8 312 aaKnown RBP15.93■□□□□ 0.14
MSH5-206ENST00000423982 CAPS2Q9BXY5 557 aa15.93■□□□□ 0.14
MSH5-206ENST00000423982 THAP9Q9H5L6 903 aa15.93■□□□□ 0.14
MSH5-206ENST00000423982 ZNHIT6Q9NWK9 470 aaKnown RBP15.93■□□□□ 0.14
MSH5-206ENST00000423982 SALL4Q9UJQ4 1053 aa15.93■□□□□ 0.14
MSH5-206ENST00000423982 LONP1P36776 959 aaKnown RBP15.92■□□□□ 0.14
MSH5-206ENST00000423982 MTIF2P46199 727 aaKnown RBP15.92■□□□□ 0.14
MSH5-206ENST00000423982 DNA2P51530 1060 aa15.92■□□□□ 0.14
MSH5-206ENST00000423982 IRX3P78415 501 aaPredicted RBP15.92■□□□□ 0.14
MSH5-206ENST00000423982 PFKFB3Q16875 520 aaPredicted RBP15.92■□□□□ 0.14
MSH5-206ENST00000423982 INF2Q27J81 1249 aa15.92■□□□□ 0.14
MSH5-206ENST00000423982 TTMPQ5BVD1 217 aa15.92■□□□□ 0.14
MSH5-206ENST00000423982 RTKN2Q8IZC4 609 aa15.92■□□□□ 0.14
MSH5-206ENST00000423982 GIMAP8Q8ND71 665 aaPredicted RBP15.92■□□□□ 0.14
MSH5-206ENST00000423982 SPATA4Q8NEY3 305 aa15.92■□□□□ 0.14
MSH5-206ENST00000423982 SH3RF3Q8TEJ3 882 aaPredicted RBP15.92■□□□□ 0.14
MSH5-206ENST00000423982 FAM207AQ9NSI2 230 aaPredicted RBP15.92■□□□□ 0.14
MSH5-206ENST00000423982 CD2APQ9Y5K6 639 aa15.92■□□□□ 0.14
MSH5-206ENST00000423982 ZSCAN5CA6NGD5 496 aaPredicted RBP15.92■□□□□ 0.14
MSH5-206ENST00000423982 ATP1A2P50993 1020 aa15.92■□□□□ 0.14
MSH5-206ENST00000423982 VAV2P52735 878 aa15.92■□□□□ 0.14
MSH5-206ENST00000423982 PDCLQ13371 301 aa15.92■□□□□ 0.14
MSH5-206ENST00000423982 BLIDQ8IZY5 108 aa15.92■□□□□ 0.14
MSH5-206ENST00000423982 EHBP1Q8NDI1 1231 aa15.92■□□□□ 0.14
MSH5-206ENST00000423982 MS4A14Q96JA4 679 aa15.92■□□□□ 0.14
MSH5-206ENST00000423982 RPGRIP1Q96KN7 1286 aa15.92■□□□□ 0.14
MSH5-206ENST00000423982 ARHGAP20Q9P2F6 1191 aa15.92■□□□□ 0.14
MSH5-206ENST00000423982 ZBTB12Q9Y330 459 aaPredicted RBP15.92■□□□□ 0.14
MSH5-206ENST00000423982 A0A087WUV0 522 aaPredicted RBP15.91■□□□□ 0.14
MSH5-206ENST00000423982 RBM5P52756 815 aaKnown RBP eCLIP15.91■□□□□ 0.14
MSH5-206ENST00000423982 ZBED6P86452 979 aa15.91■□□□□ 0.14
MSH5-206ENST00000423982 DTHD1Q6ZMT9 781 aa15.91■□□□□ 0.14
MSH5-206ENST00000423982 CCDC42Q96M95 316 aa15.91■□□□□ 0.14
MSH5-206ENST00000423982 NOC4LQ9BVI4 516 aaKnown RBP15.91■□□□□ 0.14
MSH5-206ENST00000423982 RTFDC1Q9BY42 306 aaPredicted RBP15.91■□□□□ 0.14
MSH5-206ENST00000423982 UBA7P41226 1012 aa15.91■□□□□ 0.14
MSH5-206ENST00000423982 BTDP43251 543 aa15.91■□□□□ 0.14
MSH5-206ENST00000423982 PODNQ7Z5L7 613 aa15.91■□□□□ 0.14
MSH5-206ENST00000423982 SNED1Q8TER0 1413 aa15.91■□□□□ 0.14
MSH5-206ENST00000423982 IFIH1Q9BYX4 1025 aaKnown RBP15.91■□□□□ 0.14
MSH5-206ENST00000423982 SCN9AQ15858 1988 aa15.91■□□□□ 0.14
MSH5-206ENST00000423982 ESYT3A0FGR9 886 aa15.9■□□□□ 0.14
MSH5-206ENST00000423982 ANO9A1A5B4 782 aa15.9■□□□□ 0.14
MSH5-206ENST00000423982 EBAG9O00559 213 aa15.9■□□□□ 0.14
MSH5-206ENST00000423982 DDAH1O94760 285 aa15.9■□□□□ 0.14
MSH5-206ENST00000423982 ERLIN2O94905 339 aa15.9■□□□□ 0.14
MSH5-206ENST00000423982 RHOBTB3O94955 611 aa15.9■□□□□ 0.14
MSH5-206ENST00000423982 KRT14P02533 472 aa15.9■□□□□ 0.14
MSH5-206ENST00000423982 TRAPPC10P48553 1259 aa15.9■□□□□ 0.14
MSH5-206ENST00000423982 PDE4DQ08499 809 aa15.9■□□□□ 0.14
MSH5-206ENST00000423982 PPFIA1Q13136 1202 aa15.9■□□□□ 0.14
MSH5-206ENST00000423982 CC2D2BQ6DHV5 1058 aa15.9■□□□□ 0.14
MSH5-206ENST00000423982 TAOK3Q9H2K8 898 aa15.9■□□□□ 0.14
MSH5-206ENST00000423982 NFKBIEO00221 500 aa15.9■□□□□ 0.14
MSH5-206ENST00000423982 EIF3HO15372 352 aaKnown RBP eCLIP15.9■□□□□ 0.14
MSH5-206ENST00000423982 CALM1P0DP23 149 aa15.9■□□□□ 0.14
MSH5-206ENST00000423982 CALM2P0DP24 149 aa15.9■□□□□ 0.14
MSH5-206ENST00000423982 CALM3P0DP25 149 aa15.9■□□□□ 0.14
MSH5-206ENST00000423982 GUCY2CP25092 1073 aa15.9■□□□□ 0.14
MSH5-206ENST00000423982 ARL6IP4Q66PJ3 421 aaKnown RBP15.9■□□□□ 0.14
MSH5-206ENST00000423982 TBC1D22AQ8WUA7 517 aa15.9■□□□□ 0.14
MSH5-206ENST00000423982 TGFBRAP1Q8WUH2 860 aa15.9■□□□□ 0.14
MSH5-206ENST00000423982 OSBPL9Q96SU4 736 aa15.9■□□□□ 0.14
MSH5-206ENST00000423982 CPVLQ9H3G5 476 aa15.9■□□□□ 0.14
MSH5-206ENST00000423982 KBTBD4Q9NVX7 518 aa15.9■□□□□ 0.14
MSH5-206ENST00000423982 SAP30BPQ9UHR5 308 aaKnown RBP15.9■□□□□ 0.14
MSH5-206ENST00000423982 PCDHA13Q9Y5I0 950 aa15.9■□□□□ 0.14
MSH5-206ENST00000423982 COL4A5P29400 1685 aa15.9■□□□□ 0.14
MSH5-206ENST00000423982 BUB1O43683 1085 aa15.89■□□□□ 0.13
MSH5-206ENST00000423982 CPP00450 1065 aa15.89■□□□□ 0.13
MSH5-206ENST00000423982 PLCG1P19174 1290 aa15.89■□□□□ 0.13
MSH5-206ENST00000423982 EIF4A3P38919 411 aaKnown RBP15.89■□□□□ 0.13
MSH5-206ENST00000423982 SPA17Q15506 151 aa15.89■□□□□ 0.13
MSH5-206ENST00000423982 HAUS3Q68CZ6 603 aa15.89■□□□□ 0.13
MSH5-206ENST00000423982 ZNF662Q6ZS27 426 aa15.89■□□□□ 0.13
MSH5-206ENST00000423982 MAPKAPK5Q8IW41 473 aa15.89■□□□□ 0.13
MSH5-206ENST00000423982 P2RX5Q93086 422 aa15.89■□□□□ 0.13
MSH5-206ENST00000423982 SH2D4AQ9H788 454 aa15.89■□□□□ 0.13
MSH5-206ENST00000423982 USP17L3A6NCW0 530 aa15.89■□□□□ 0.13
MSH5-206ENST00000423982 USP17L4A6NCW7 530 aa15.89■□□□□ 0.13
MSH5-206ENST00000423982 CACNB3P54284 484 aa15.89■□□□□ 0.13
MSH5-206ENST00000423982 PICALMQ13492 652 aa15.89■□□□□ 0.13
MSH5-206ENST00000423982 KCNB1Q14721 858 aa15.89■□□□□ 0.13
MSH5-206ENST00000423982 SLC35G1Q2M3R5 365 aa15.89■□□□□ 0.13
MSH5-206ENST00000423982 RCSD1Q6JBY9 416 aa15.89■□□□□ 0.13
MSH5-206ENST00000423982 USP17L1Q7RTZ2 530 aa15.89■□□□□ 0.13
MSH5-206ENST00000423982 CCDC170Q8IYT3 715 aa15.89■□□□□ 0.13
MSH5-206ENST00000423982 MMGT1Q8N4V1 131 aa15.89■□□□□ 0.13
MSH5-206ENST00000423982 SUPT20HQ8NEM7 779 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms