RNA–Protein interactions for RNA: ENST00000423613.6

TNC-203, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-203ENST00000423613 CNGB3Q9NQW8 809 aa12.06□□□□□ -0.48
TNC-203ENST00000423613 TFAP4Q01664 338 aa12.06□□□□□ -0.48
TNC-203ENST00000423613 RNASELQ05823 741 aaKnown RBP12.06□□□□□ -0.48
TNC-203ENST00000423613 CEP55Q53EZ4 464 aa12.06□□□□□ -0.48
TNC-203ENST00000423613 C6orf118Q5T5N4 469 aa12.06□□□□□ -0.48
TNC-203ENST00000423613 SCYL2Q6P3W7 929 aa12.06□□□□□ -0.48
TNC-203ENST00000423613 GANCQ8TET4 914 aa12.06□□□□□ -0.48
TNC-203ENST00000423613 KIFC3Q9BVG8 833 aa12.06□□□□□ -0.48
TNC-203ENST00000423613 SLFN14P0C7P3 912 aa12.05□□□□□ -0.48
TNC-203ENST00000423613 BCRP11274 1271 aa12.05□□□□□ -0.48
TNC-203ENST00000423613 ARPP19P56211 112 aa12.05□□□□□ -0.48
TNC-203ENST00000423613 TMED2Q15363 201 aa12.05□□□□□ -0.48
TNC-203ENST00000423613 MUM1L1Q5H9M0 696 aa12.05□□□□□ -0.48
TNC-203ENST00000423613 FNDC3AQ9Y2H6 1198 aaKnown RBP12.05□□□□□ -0.48
TNC-203ENST00000423613 TCOF1Q13428 1488 aaKnown RBP12.05□□□□□ -0.48
TNC-203ENST00000423613 SPDYE2BA6NHP3 402 aa12.05□□□□□ -0.48
TNC-203ENST00000423613 CTNND1O60716 968 aaKnown RBP12.05□□□□□ -0.48
TNC-203ENST00000423613 SPDYE6P0CI01 402 aa12.05□□□□□ -0.48
TNC-203ENST00000423613 PFKFB1P16118 471 aa12.05□□□□□ -0.48
TNC-203ENST00000423613 NCF2P19878 526 aaPredicted RBP12.05□□□□□ -0.48
TNC-203ENST00000423613 NNTQ13423 1086 aa12.05□□□□□ -0.48
TNC-203ENST00000423613 DCAF15Q66K64 600 aa12.05□□□□□ -0.48
TNC-203ENST00000423613 TRIM58Q8NG06 486 aa12.05□□□□□ -0.48
TNC-203ENST00000423613 TRAIPQ9BWF2 469 aa12.05□□□□□ -0.48
TNC-203ENST00000423613 RIC8AQ9NPQ8 531 aa12.05□□□□□ -0.48
TNC-203ENST00000423613 PYCARDQ9ULZ3 195 aa12.05□□□□□ -0.48
TNC-203ENST00000423613 SYNJ2BP-COX16A0A087WUM0 186 aa12.05□□□□□ -0.48
TNC-203ENST00000423613 IFNB1P01574 187 aa12.05□□□□□ -0.48
TNC-203ENST00000423613 C2orf54Q08AI8 447 aa12.05□□□□□ -0.48
TNC-203ENST00000423613 DMPKQ09013 629 aa12.05□□□□□ -0.48
TNC-203ENST00000423613 SLC9A5Q14940 896 aa12.05□□□□□ -0.48
TNC-203ENST00000423613 PPP4R4Q6NUP7 873 aa12.05□□□□□ -0.48
TNC-203ENST00000423613 FBXO18Q8NFZ0 1043 aa12.05□□□□□ -0.48
TNC-203ENST00000423613 GRK7Q8WTQ7 553 aa12.05□□□□□ -0.48
TNC-203ENST00000423613 MAIP1Q8WWC4 291 aa12.05□□□□□ -0.48
TNC-203ENST00000423613 RPS6KC1Q96S38 1066 aa12.05□□□□□ -0.48
TNC-203ENST00000423613 COX16Q9P0S2 106 aa12.05□□□□□ -0.48
TNC-203ENST00000423613 ATP11BQ9Y2G3 1177 aa12.05□□□□□ -0.48
TNC-203ENST00000423613 GPC4O75487 556 aa12.05□□□□□ -0.48
TNC-203ENST00000423613 ATF7P17544 494 aaPredicted RBP12.05□□□□□ -0.48
TNC-203ENST00000423613 PPARAQ07869 468 aa12.05□□□□□ -0.48
TNC-203ENST00000423613 ART3Q13508 389 aa12.05□□□□□ -0.48
TNC-203ENST00000423613 MYSM1Q5VVJ2 828 aa12.05□□□□□ -0.48
TNC-203ENST00000423613 LRRC8AQ8IWT6 810 aa12.05□□□□□ -0.48
TNC-203ENST00000423613 THOC1Q96FV9 657 aaKnown RBP12.05□□□□□ -0.48
TNC-203ENST00000423613 LSM14BQ9BX40 385 aaKnown RBP12.05□□□□□ -0.48
TNC-203ENST00000423613 ATF2P15336 505 aa12.04□□□□□ -0.48
TNC-203ENST00000423613 ATP5JP18859 108 aa12.04□□□□□ -0.48
TNC-203ENST00000423613 HDLBPQ00341 1268 aaKnown RBP12.04□□□□□ -0.48
TNC-203ENST00000423613 APBA1Q02410 837 aa12.04□□□□□ -0.48
TNC-203ENST00000423613 PARP9Q8IXQ6 854 aa12.04□□□□□ -0.48
TNC-203ENST00000423613 PPP1R13BQ96KQ4 1090 aa12.04□□□□□ -0.48
TNC-203ENST00000423613 SUGCTQ9HAC7 445 aa12.04□□□□□ -0.48
TNC-203ENST00000423613 SCNN1DP51172 638 aa12.04□□□□□ -0.48
TNC-203ENST00000423613 ARHGDIAP52565 204 aa12.04□□□□□ -0.48
TNC-203ENST00000423613 CCDC84Q86UT8 332 aaPredicted RBP12.04□□□□□ -0.48
TNC-203ENST00000423613 CMTR1Q8N1G2 835 aaKnown RBP12.04□□□□□ -0.48
TNC-203ENST00000423613 U2AF1L4Q8WU68 220 aaKnown RBP12.04□□□□□ -0.48
TNC-203ENST00000423613 ZBED2Q9BTP6 218 aa12.04□□□□□ -0.48
TNC-203ENST00000423613 TM6SF1Q9BZW5 370 aa12.04□□□□□ -0.48
TNC-203ENST00000423613 AP5M1Q9H0R1 490 aa12.04□□□□□ -0.48
TNC-203ENST00000423613 ASCC2Q9H1I8 757 aaPredicted RBP12.04□□□□□ -0.48
TNC-203ENST00000423613 KRT81Q14533 505 aa12.04□□□□□ -0.48
TNC-203ENST00000423613 TRIM50Q86XT4 487 aa12.04□□□□□ -0.48
TNC-203ENST00000423613 REXO1Q8N1G1 1221 aaKnown RBP12.04□□□□□ -0.48
TNC-203ENST00000423613 TTC30BQ8N4P2 665 aa12.04□□□□□ -0.48
TNC-203ENST00000423613 RDH13Q8NBN7 331 aa12.04□□□□□ -0.48
TNC-203ENST00000423613 DDX17Q92841 729 aaKnown RBP12.04□□□□□ -0.48
TNC-203ENST00000423613 EXOC4Q96A65 974 aa12.04□□□□□ -0.48
TNC-203ENST00000423613 TRIM8Q9BZR9 551 aa12.04□□□□□ -0.48
TNC-203ENST00000423613 ABCB4P21439 1286 aa12.04□□□□□ -0.48
TNC-203ENST00000423613 KIF11P52732 1056 aa12.04□□□□□ -0.48
TNC-203ENST00000423613 ACBD5Q5T8D3 534 aaPredicted RBP12.04□□□□□ -0.48
TNC-203ENST00000423613 ADALQ6DHV7 355 aa12.04□□□□□ -0.48
TNC-203ENST00000423613 TMCO5AQ8N6Q1 288 aa12.04□□□□□ -0.48
TNC-203ENST00000423613 ZNF513Q8N8E2 541 aaPredicted RBP12.04□□□□□ -0.48
TNC-203ENST00000423613 CCDC90BQ9GZT6 254 aa12.04□□□□□ -0.48
TNC-203ENST00000423613 COPG1Q9Y678 874 aaKnown RBP12.04□□□□□ -0.48
TNC-203ENST00000423613 WDR91A4D1P6 747 aa12.04□□□□□ -0.48
TNC-203ENST00000423613 ESRRAP11474 423 aaPredicted RBP12.04□□□□□ -0.48
TNC-203ENST00000423613 OSBPP22059 807 aa12.04□□□□□ -0.48
TNC-203ENST00000423613 STX1BP61266 288 aa12.04□□□□□ -0.48
TNC-203ENST00000423613 ZBTB8OSQ8IWT0 167 aa12.04□□□□□ -0.48
TNC-203ENST00000423613 DNAJC10Q8IXB1 793 aa12.04□□□□□ -0.48
TNC-203ENST00000423613 MCUQ8NE86 351 aa12.04□□□□□ -0.48
TNC-203ENST00000423613 ADPGKQ9BRR6 497 aa12.04□□□□□ -0.48
TNC-203ENST00000423613 ECE1P42892 770 aa12.03□□□□□ -0.48
TNC-203ENST00000423613 NAA35Q5VZE5 725 aa12.03□□□□□ -0.48
TNC-203ENST00000423613 UHRF1BP1Q6BDS2 1440 aa12.03□□□□□ -0.48
TNC-203ENST00000423613 KCNJ18B7U540 433 aa12.03□□□□□ -0.48
TNC-203ENST00000423613 GSPT1P15170 499 aaKnown RBP12.03□□□□□ -0.48
TNC-203ENST00000423613 EIF4A1P60842 406 aaKnown RBP12.03□□□□□ -0.48
TNC-203ENST00000423613 PTH1RQ03431 593 aa12.03□□□□□ -0.48
TNC-203ENST00000423613 KCNJ12Q14500 433 aa12.03□□□□□ -0.48
TNC-203ENST00000423613 ZC3H12BQ5HYM0 836 aaKnown RBP12.03□□□□□ -0.48
TNC-203ENST00000423613 ZNF654Q8IZM8 581 aa12.03□□□□□ -0.48
TNC-203ENST00000423613 OLFM3Q96PB7 478 aa12.03□□□□□ -0.48
TNC-203ENST00000423613 TRPV6Q9H1D0 765 aa12.03□□□□□ -0.48
TNC-203ENST00000423613 QTRT2Q9H974 415 aaKnown RBP12.03□□□□□ -0.48
TNC-203ENST00000423613 LMCD1Q9NZU5 365 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms