RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 XPOTO43592 962 aaKnown RBP7.49□□□□□ -1.21
CNOT4-205ENST00000423368 STAMBPO95630 424 aa7.49□□□□□ -1.21
CNOT4-205ENST00000423368 TFPTP0C1Z6 253 aa7.49□□□□□ -1.21
CNOT4-205ENST00000423368 BMP6P22004 513 aa7.49□□□□□ -1.21
CNOT4-205ENST00000423368 AFMP43652 599 aa7.49□□□□□ -1.21
CNOT4-205ENST00000423368 GFPT1Q06210 699 aaPredicted RBP7.49□□□□□ -1.21
CNOT4-205ENST00000423368 CERKLQ49MI3 558 aaPredicted RBP7.49□□□□□ -1.21
CNOT4-205ENST00000423368 PRR23CQ6ZRP0 262 aa7.49□□□□□ -1.21
CNOT4-205ENST00000423368 KRT26Q7Z3Y9 468 aa7.49□□□□□ -1.21
CNOT4-205ENST00000423368 ZBTB46Q86UZ6 589 aa7.49□□□□□ -1.21
CNOT4-205ENST00000423368 DEPTORQ8TB45 409 aa7.49□□□□□ -1.21
CNOT4-205ENST00000423368 GLMNQ92990 594 aa7.49□□□□□ -1.21
CNOT4-205ENST00000423368 ZNF653Q96CK0 615 aa7.49□□□□□ -1.21
CNOT4-205ENST00000423368 EDC3Q96F86 508 aaKnown RBP7.49□□□□□ -1.21
CNOT4-205ENST00000423368 PANX2Q96RD6 677 aa7.49□□□□□ -1.21
CNOT4-205ENST00000423368 TAF1DQ9H5J8 278 aaPredicted RBP7.49□□□□□ -1.21
CNOT4-205ENST00000423368 POLR3EQ9NVU0 708 aa7.49□□□□□ -1.21
CNOT4-205ENST00000423368 PNMA2Q9UL42 364 aa7.49□□□□□ -1.21
CNOT4-205ENST00000423368 WDR37Q9Y2I8 494 aa7.49□□□□□ -1.21
CNOT4-205ENST00000423368 ATP8A1Q9Y2Q0 1164 aa7.49□□□□□ -1.21
CNOT4-205ENST00000423368 CLASP1Q7Z460 1538 aa7.49□□□□□ -1.21
CNOT4-205ENST00000423368 TARSL2A2RTX5 802 aaKnown RBP7.48□□□□□ -1.21
CNOT4-205ENST00000423368 ACTN4O43707 911 aaKnown RBP7.48□□□□□ -1.21
CNOT4-205ENST00000423368 MYCP01106 439 aaPredicted RBP7.48□□□□□ -1.21
CNOT4-205ENST00000423368 NCALDP61601 193 aa7.48□□□□□ -1.21
CNOT4-205ENST00000423368 TEFQ10587 303 aa7.48□□□□□ -1.21
CNOT4-205ENST00000423368 OR52E8Q6IFG1 317 aa7.48□□□□□ -1.21
CNOT4-205ENST00000423368 SPATA4Q8NEY3 305 aa7.48□□□□□ -1.21
CNOT4-205ENST00000423368 CXorf38Q8TB03 319 aa7.48□□□□□ -1.21
CNOT4-205ENST00000423368 DDX12PQ92771 950 aa7.48□□□□□ -1.21
CNOT4-205ENST00000423368 FERMT2Q96AC1 680 aa7.48□□□□□ -1.21
CNOT4-205ENST00000423368 ARMC7Q9H6L4 198 aa7.48□□□□□ -1.21
CNOT4-205ENST00000423368 RBM12Q9NTZ6 932 aaKnown RBP7.48□□□□□ -1.21
CNOT4-205ENST00000423368 CFAP43Q8NDM7 1665 aa7.48□□□□□ -1.21
CNOT4-205ENST00000423368 GNAI2P04899 355 aa7.48□□□□□ -1.21
CNOT4-205ENST00000423368 COL6A2P12110 1019 aa7.48□□□□□ -1.21
CNOT4-205ENST00000423368 GBP1P32455 592 aa7.48□□□□□ -1.21
CNOT4-205ENST00000423368 PEX5P50542 639 aa7.48□□□□□ -1.21
CNOT4-205ENST00000423368 KPNA1P52294 538 aaPredicted RBP7.48□□□□□ -1.21
CNOT4-205ENST00000423368 MDM2Q00987 491 aaPredicted RBP7.48□□□□□ -1.21
CNOT4-205ENST00000423368 NUTM2DQ5VT03 806 aaPredicted RBP7.48□□□□□ -1.21
CNOT4-205ENST00000423368 RASGRP2Q7LDG7 609 aa7.48□□□□□ -1.21
CNOT4-205ENST00000423368 SREK1Q8WXA9 508 aaKnown RBP7.48□□□□□ -1.21
CNOT4-205ENST00000423368 ATP6V0A1Q93050 837 aa7.48□□□□□ -1.21
CNOT4-205ENST00000423368 KRT12Q99456 494 aa7.48□□□□□ -1.21
CNOT4-205ENST00000423368 CEP44Q9C0F1 390 aa7.48□□□□□ -1.21
CNOT4-205ENST00000423368 ATAD3AQ9NVI7 634 aa7.48□□□□□ -1.21
CNOT4-205ENST00000423368 DNAJC17Q9NVM6 304 aaKnown RBP7.48□□□□□ -1.21
CNOT4-205ENST00000423368 EPN1Q9Y6I3 576 aaPredicted RBP7.48□□□□□ -1.21
CNOT4-205ENST00000423368 ATXN2Q99700 1313 aaKnown RBP7.48□□□□□ -1.21
CNOT4-205ENST00000423368 UNC13AQ9UPW8 1703 aa7.48□□□□□ -1.21
CNOT4-205ENST00000423368 RCCD1A6NED2 376 aa7.47□□□□□ -1.21
CNOT4-205ENST00000423368 A6NL46 340 aa7.47□□□□□ -1.21
CNOT4-205ENST00000423368 CYP1A1P04798 512 aaPredicted RBP7.47□□□□□ -1.21
CNOT4-205ENST00000423368 GYPCP04921 128 aa7.47□□□□□ -1.21
CNOT4-205ENST00000423368 TMED10P49755 219 aaKnown RBP7.47□□□□□ -1.21
CNOT4-205ENST00000423368 TBX2Q13207 712 aaPredicted RBP7.47□□□□□ -1.21
CNOT4-205ENST00000423368 ADALQ6DHV7 355 aa7.47□□□□□ -1.21
CNOT4-205ENST00000423368 CCDC129Q6ZRS4 1044 aa7.47□□□□□ -1.21
CNOT4-205ENST00000423368 TREML1Q86YW5 311 aa7.47□□□□□ -1.21
CNOT4-205ENST00000423368 TTLL11Q8NHH1 800 aa7.47□□□□□ -1.21
CNOT4-205ENST00000423368 CHMP6Q96FZ7 201 aa7.47□□□□□ -1.21
CNOT4-205ENST00000423368 PRMT1Q99873 361 aaKnown RBP7.47□□□□□ -1.21
CNOT4-205ENST00000423368 MLXIPQ9HAP2 919 aa7.47□□□□□ -1.21
CNOT4-205ENST00000423368 RMND1Q9NWS8 449 aa7.47□□□□□ -1.21
CNOT4-205ENST00000423368 CWC25Q9NXE8 425 aaPredicted RBP7.47□□□□□ -1.21
CNOT4-205ENST00000423368 TAB2Q9NYJ8 693 aa7.47□□□□□ -1.21
CNOT4-205ENST00000423368 TIMM22Q9Y584 194 aa7.47□□□□□ -1.21
CNOT4-205ENST00000423368 HEMK1Q9Y5R4 338 aaPredicted RBP7.47□□□□□ -1.21
CNOT4-205ENST00000423368 MROH7-TTC4A0A0A0MT08 1334 aa7.47□□□□□ -1.21
CNOT4-205ENST00000423368 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.47□□□□□ -1.21
CNOT4-205ENST00000423368 BUB1O43683 1085 aa7.47□□□□□ -1.21
CNOT4-205ENST00000423368 MFAP3LO75121 409 aa7.47□□□□□ -1.21
CNOT4-205ENST00000423368 ITGA2BP08514 1039 aa7.47□□□□□ -1.21
CNOT4-205ENST00000423368 IARSP41252 1262 aaKnown RBP7.47□□□□□ -1.21
CNOT4-205ENST00000423368 KIF11P52732 1056 aa7.47□□□□□ -1.21
CNOT4-205ENST00000423368 CKAP4Q07065 602 aaKnown RBP7.47□□□□□ -1.21
CNOT4-205ENST00000423368 ZNF268Q14587 947 aaPredicted RBP7.47□□□□□ -1.21
CNOT4-205ENST00000423368 SHROOM1Q2M3G4 852 aaPredicted RBP7.47□□□□□ -1.21
CNOT4-205ENST00000423368 ZNF554Q86TJ5 538 aa7.47□□□□□ -1.21
CNOT4-205ENST00000423368 CLASRPQ8N2M8 674 aaKnown RBP7.47□□□□□ -1.21
CNOT4-205ENST00000423368 TEX9Q8N6V9 391 aa7.47□□□□□ -1.21
CNOT4-205ENST00000423368 SPZ1Q9BXG8 430 aa7.47□□□□□ -1.21
CNOT4-205ENST00000423368 CCSER1Q9C0I3 900 aa7.47□□□□□ -1.21
CNOT4-205ENST00000423368 C19orf44Q9H6X5 657 aa7.47□□□□□ -1.21
CNOT4-205ENST00000423368 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.47□□□□□ -1.21
CNOT4-205ENST00000423368 PACSIN2Q9UNF0 486 aaPredicted RBP7.47□□□□□ -1.21
CNOT4-205ENST00000423368 ZNF148Q9UQR1 794 aa7.47□□□□□ -1.21
CNOT4-205ENST00000423368 MAP3K19Q56UN5 1328 aa7.47□□□□□ -1.21
CNOT4-205ENST00000423368 LIN7AO14910 233 aaPredicted RBP7.47□□□□□ -1.21
CNOT4-205ENST00000423368 OXSR1O95747 527 aaPredicted RBP7.47□□□□□ -1.21
CNOT4-205ENST00000423368 DDX5P17844 614 aaKnown RBP7.47□□□□□ -1.21
CNOT4-205ENST00000423368 ATP6V1C1P21283 382 aa7.47□□□□□ -1.21
CNOT4-205ENST00000423368 MZF1P28698 734 aaPredicted RBP7.47□□□□□ -1.21
CNOT4-205ENST00000423368 PKN1Q16512 942 aa7.47□□□□□ -1.21
CNOT4-205ENST00000423368 SLC4A8Q2Y0W8 1093 aa7.47□□□□□ -1.21
CNOT4-205ENST00000423368 CCSAPQ6IQ19 270 aaPredicted RBP7.47□□□□□ -1.21
CNOT4-205ENST00000423368 OTUD6AQ7L8S5 288 aa7.47□□□□□ -1.21
CNOT4-205ENST00000423368 SPATA24Q86W54 205 aa7.47□□□□□ -1.21
CNOT4-205ENST00000423368 NME8Q8N427 588 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms