RNA–Protein interactions for RNA: ENST00000422109.6

CTCFL-203, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,964 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-203ENST00000422109 RBM17Q96I25 401 aaKnown RBP15.3■□□□□ 0.04
CTCFL-203ENST00000422109 IFIH1Q9BYX4 1025 aaKnown RBP15.3■□□□□ 0.04
CTCFL-203ENST00000422109 TTYH3Q9C0H2 523 aa15.3■□□□□ 0.04
CTCFL-203ENST00000422109 LRRC53A6NM62 1247 aa15.3■□□□□ 0.04
CTCFL-203ENST00000422109 TRAF5O00463 557 aa15.3■□□□□ 0.04
CTCFL-203ENST00000422109 MAP2K7O14733 419 aa15.3■□□□□ 0.04
CTCFL-203ENST00000422109 EDIL3O43854 480 aa15.3■□□□□ 0.04
CTCFL-203ENST00000422109 EZH2Q15910 746 aaKnown RBP15.3■□□□□ 0.04
CTCFL-203ENST00000422109 PTPROQ16827 1216 aa15.3■□□□□ 0.04
CTCFL-203ENST00000422109 VWA3BQ502W6 1294 aa15.3■□□□□ 0.04
CTCFL-203ENST00000422109 SECISBP2LQ93073 1101 aaKnown RBP15.3■□□□□ 0.04
CTCFL-203ENST00000422109 ARHGAP20Q9P2F6 1191 aa15.3■□□□□ 0.04
CTCFL-203ENST00000422109 MYO1AQ9UBC5 1043 aa15.3■□□□□ 0.04
CTCFL-203ENST00000422109 POTEB2H3BUK9 544 aa15.3■□□□□ 0.04
CTCFL-203ENST00000422109 STAT3P40763 770 aa15.3■□□□□ 0.04
CTCFL-203ENST00000422109 RNASE9P60153 205 aaKnown RBP15.3■□□□□ 0.04
CTCFL-203ENST00000422109 GPS2Q13227 327 aa15.3■□□□□ 0.04
CTCFL-203ENST00000422109 CCDC40Q4G0X9 1142 aa15.3■□□□□ 0.04
CTCFL-203ENST00000422109 HSP90B2PQ58FF3 399 aa15.3■□□□□ 0.04
CTCFL-203ENST00000422109 UBXN6Q9BZV1 441 aa15.3■□□□□ 0.04
CTCFL-203ENST00000422109 JMJD4Q9H9V9 463 aa15.3■□□□□ 0.04
CTCFL-203ENST00000422109 DDX25Q9UHL0 483 aaKnown RBP15.3■□□□□ 0.04
CTCFL-203ENST00000422109 RAB21Q9UL25 225 aa15.3■□□□□ 0.04
CTCFL-203ENST00000422109 GYS1P13807 737 aa15.29■□□□□ 0.04
CTCFL-203ENST00000422109 PLCG2P16885 1265 aa15.29■□□□□ 0.04
CTCFL-203ENST00000422109 SLC7A5Q01650 507 aa15.29■□□□□ 0.04
CTCFL-203ENST00000422109 GFPT1Q06210 699 aaPredicted RBP15.29■□□□□ 0.04
CTCFL-203ENST00000422109 NOC3LQ8WTT2 800 aaKnown RBP15.29■□□□□ 0.04
CTCFL-203ENST00000422109 CUEDC2Q9H467 287 aa15.29■□□□□ 0.04
CTCFL-203ENST00000422109 PSMD14O00487 310 aa15.29■□□□□ 0.04
CTCFL-203ENST00000422109 MYL1P05976 194 aa15.29■□□□□ 0.04
CTCFL-203ENST00000422109 RBM5P52756 815 aaKnown RBP eCLIP15.29■□□□□ 0.04
CTCFL-203ENST00000422109 NFIAQ12857 509 aa15.29■□□□□ 0.04
CTCFL-203ENST00000422109 ZSCAN29Q8IWY8 852 aaPredicted RBP15.29■□□□□ 0.04
CTCFL-203ENST00000422109 ZFPM1Q8IX07 1006 aa15.29■□□□□ 0.04
CTCFL-203ENST00000422109 MTMR9Q96QG7 549 aa15.29■□□□□ 0.04
CTCFL-203ENST00000422109 NUP58Q9BVL2 599 aa15.29■□□□□ 0.04
CTCFL-203ENST00000422109 KCNQ5Q9NR82 932 aa15.29■□□□□ 0.04
CTCFL-203ENST00000422109 SRCAPQ6ZRS2 3230 aa15.28■□□□□ 0.04
CTCFL-203ENST00000422109 EIF3JO75822 258 aaKnown RBP15.28■□□□□ 0.04
CTCFL-203ENST00000422109 MYBL2P10244 700 aa15.28■□□□□ 0.04
CTCFL-203ENST00000422109 KIF11P52732 1056 aa15.28■□□□□ 0.04
CTCFL-203ENST00000422109 MEX3CQ5U5Q3 659 aaKnown RBP15.28■□□□□ 0.04
CTCFL-203ENST00000422109 NFRKBQ6P4R8 1299 aa15.28■□□□□ 0.04
CTCFL-203ENST00000422109 DNAAF5Q86Y56 855 aa15.28■□□□□ 0.04
CTCFL-203ENST00000422109 CERS5Q8N5B7 392 aa15.28■□□□□ 0.04
CTCFL-203ENST00000422109 COG1Q8WTW3 980 aa15.28■□□□□ 0.04
CTCFL-203ENST00000422109 RAD54LQ92698 747 aa15.28■□□□□ 0.04
CTCFL-203ENST00000422109 RIOX1Q9H6W3 641 aa15.28■□□□□ 0.04
CTCFL-203ENST00000422109 KIAA1024Q9UPX6 916 aa15.28■□□□□ 0.04
CTCFL-203ENST00000422109 MYH10P35580 1976 aa15.28■□□□□ 0.04
CTCFL-203ENST00000422109 KRT18P05783 430 aaKnown RBP15.28■□□□□ 0.04
CTCFL-203ENST00000422109 RASSF7Q02833 373 aa15.28■□□□□ 0.04
CTCFL-203ENST00000422109 IKQ13123 557 aaPredicted RBP15.28■□□□□ 0.04
CTCFL-203ENST00000422109 MEA1Q16626 185 aa15.28■□□□□ 0.04
CTCFL-203ENST00000422109 UNC13DQ70J99 1090 aa15.28■□□□□ 0.04
CTCFL-203ENST00000422109 PCDHA13Q9Y5I0 950 aa15.28■□□□□ 0.04
CTCFL-203ENST00000422109 NAV1Q8NEY1 1877 aa15.28■□□□□ 0.04
CTCFL-203ENST00000422109 MEIS1O00470 390 aa15.27■□□□□ 0.04
CTCFL-203ENST00000422109 TOM1O60784 492 aa15.27■□□□□ 0.04
CTCFL-203ENST00000422109 IL1R1P14778 569 aa15.27■□□□□ 0.04
CTCFL-203ENST00000422109 CAPN2P17655 700 aa15.27■□□□□ 0.04
CTCFL-203ENST00000422109 USP14P54578 494 aa15.27■□□□□ 0.04
CTCFL-203ENST00000422109 MAPK8IP2Q13387 824 aaPredicted RBP15.27■□□□□ 0.04
CTCFL-203ENST00000422109 SLC30A10Q6XR72 485 aa15.27■□□□□ 0.04
CTCFL-203ENST00000422109 HDAC7Q8WUI4 952 aa15.27■□□□□ 0.04
CTCFL-203ENST00000422109 PCDHA12Q9UN75 941 aa15.27■□□□□ 0.04
CTCFL-203ENST00000422109 POTEB3A0JP26 581 aa15.27■□□□□ 0.04
CTCFL-203ENST00000422109 POTECB2RU33 542 aa15.27■□□□□ 0.04
CTCFL-203ENST00000422109 EIF3CLB5ME19 914 aaKnown RBP15.27■□□□□ 0.04
CTCFL-203ENST00000422109 USH1GQ495M9 461 aa15.27■□□□□ 0.04
CTCFL-203ENST00000422109 CENPPQ6IPU0 288 aa15.27■□□□□ 0.04
CTCFL-203ENST00000422109 POTEBQ6S5H4 581 aa15.27■□□□□ 0.04
CTCFL-203ENST00000422109 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.27■□□□□ 0.04
CTCFL-203ENST00000422109 EIF3CQ99613 913 aaKnown RBP15.27■□□□□ 0.04
CTCFL-203ENST00000422109 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.27■□□□□ 0.04
CTCFL-203ENST00000422109 RABEP2Q9H5N1 569 aa15.27■□□□□ 0.04
CTCFL-203ENST00000422109 PSTPIP2Q9H939 334 aa15.27■□□□□ 0.04
CTCFL-203ENST00000422109 SERPINB13Q9UIV8 391 aa15.27■□□□□ 0.04
CTCFL-203ENST00000422109 VAV2P52735 878 aa15.27■□□□□ 0.03
CTCFL-203ENST00000422109 DDR1Q08345 913 aa15.27■□□□□ 0.03
CTCFL-203ENST00000422109 TUBB2AQ13885 445 aa15.27■□□□□ 0.03
CTCFL-203ENST00000422109 SLF2Q8IX21 1173 aa15.27■□□□□ 0.03
CTCFL-203ENST00000422109 TUBB2BQ9BVA1 445 aa15.27■□□□□ 0.03
CTCFL-203ENST00000422109 RAB34Q9BZG1 259 aa15.27■□□□□ 0.03
CTCFL-203ENST00000422109 ZC3H12CQ9C0D7 883 aaKnown RBP15.27■□□□□ 0.03
CTCFL-203ENST00000422109 PANK4Q9NVE7 773 aa15.27■□□□□ 0.03
CTCFL-203ENST00000422109 TTLL1O95922 423 aa15.26■□□□□ 0.03
CTCFL-203ENST00000422109 MAGEA1P43355 309 aa15.26■□□□□ 0.03
CTCFL-203ENST00000422109 ZSCAN26Q16670 478 aa15.26■□□□□ 0.03
CTCFL-203ENST00000422109 KIAA0825Q8IV33 1275 aa15.26■□□□□ 0.03
CTCFL-203ENST00000422109 DBNDD1Q9H9R9 158 aa15.26■□□□□ 0.03
CTCFL-203ENST00000422109 CALCOCO1Q9P1Z2 691 aa15.26■□□□□ 0.03
CTCFL-203ENST00000422109 SALL4Q9UJQ4 1053 aa15.26■□□□□ 0.03
CTCFL-203ENST00000422109 DDX60LQ5H9U9 1706 aaKnown RBP15.26■□□□□ 0.03
CTCFL-203ENST00000422109 BTAF1O14981 1849 aa15.26■□□□□ 0.03
CTCFL-203ENST00000422109 USO1O60763 962 aaKnown RBP15.26■□□□□ 0.03
CTCFL-203ENST00000422109 PPARDQ03181 441 aa15.26■□□□□ 0.03
CTCFL-203ENST00000422109 COASYQ13057 564 aa15.26■□□□□ 0.03
CTCFL-203ENST00000422109 MAN2A1Q16706 1144 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms