RNA–Protein interactions for RNA: ENST00000420995.6

TRIM13-204, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-204ENST00000420995 EPHB4P54760 987 aa17.59■□□□□ 0.41
TRIM13-204ENST00000420995 GNGT1P63211 74 aa17.59■□□□□ 0.41
TRIM13-204ENST00000420995 COBLL1Q53SF7 1204 aa17.59■□□□□ 0.41
TRIM13-204ENST00000420995 C8orf74Q6P047 294 aa17.59■□□□□ 0.41
TRIM13-204ENST00000420995 PNMA5Q96PV4 448 aa17.59■□□□□ 0.41
TRIM13-204ENST00000420995 MYH10P35580 1976 aa17.59■□□□□ 0.41
TRIM13-204ENST00000420995 ZSCAN5CA6NGD5 496 aaPredicted RBP17.59■□□□□ 0.41
TRIM13-204ENST00000420995 LDHBP07195 334 aaKnown RBP17.59■□□□□ 0.41
TRIM13-204ENST00000420995 NAP1L1P55209 391 aaKnown RBP17.59■□□□□ 0.41
TRIM13-204ENST00000420995 TDRD12Q587J7 1177 aaKnown RBP17.59■□□□□ 0.41
TRIM13-204ENST00000420995 LRRC55Q6ZSA7 311 aa17.59■□□□□ 0.41
TRIM13-204ENST00000420995 UNC13DQ70J99 1090 aa17.59■□□□□ 0.41
TRIM13-204ENST00000420995 CCDC84Q86UT8 332 aaPredicted RBP17.59■□□□□ 0.41
TRIM13-204ENST00000420995 LINC00116Q8NCU8 138 aa17.59■□□□□ 0.41
TRIM13-204ENST00000420995 BCAS4Q8TDM0 211 aa17.59■□□□□ 0.41
TRIM13-204ENST00000420995 LARP4BQ92615 738 aaKnown RBP17.59■□□□□ 0.41
TRIM13-204ENST00000420995 ROBO3Q96MS0 1386 aa17.59■□□□□ 0.41
TRIM13-204ENST00000420995 PIGSQ96S52 555 aa17.59■□□□□ 0.41
TRIM13-204ENST00000420995 SPZ1Q9BXG8 430 aa17.59■□□□□ 0.41
TRIM13-204ENST00000420995 TANGO6Q9C0B7 1094 aa17.59■□□□□ 0.41
TRIM13-204ENST00000420995 POLD4Q9HCU8 107 aa17.59■□□□□ 0.41
TRIM13-204ENST00000420995 NLRC4Q9NPP4 1024 aa17.59■□□□□ 0.41
TRIM13-204ENST00000420995 ESYT3A0FGR9 886 aa17.58■□□□□ 0.41
TRIM13-204ENST00000420995 SLC37A4O43826 429 aa17.58■□□□□ 0.41
TRIM13-204ENST00000420995 GNA11P29992 359 aa17.58■□□□□ 0.41
TRIM13-204ENST00000420995 ASTE1Q2TB18 679 aaPredicted RBP17.58■□□□□ 0.41
TRIM13-204ENST00000420995 KLHDC7AQ5VTJ3 777 aa17.58■□□□□ 0.41
TRIM13-204ENST00000420995 CACNA2D4Q7Z3S7 1137 aa17.58■□□□□ 0.41
TRIM13-204ENST00000420995 EFCAB13Q8IY85 973 aa17.58■□□□□ 0.41
TRIM13-204ENST00000420995 PLCD3Q8N3E9 789 aa17.58■□□□□ 0.41
TRIM13-204ENST00000420995 IQCDQ96DY2 449 aa17.58■□□□□ 0.41
TRIM13-204ENST00000420995 NUDT12Q9BQG2 462 aa17.58■□□□□ 0.41
TRIM13-204ENST00000420995 SPATA31A5Q5VU36 1347 aa17.58■□□□□ 0.4
TRIM13-204ENST00000420995 SPATA31A7Q8IWB4 1347 aa17.58■□□□□ 0.4
TRIM13-204ENST00000420995 EIF3HO15372 352 aaKnown RBP eCLIP17.58■□□□□ 0.4
TRIM13-204ENST00000420995 PAFAH1B1P43034 410 aa17.58■□□□□ 0.4
TRIM13-204ENST00000420995 SOGA3Q5TF21 947 aa17.58■□□□□ 0.4
TRIM13-204ENST00000420995 PDXDC1Q6P996 788 aa17.58■□□□□ 0.4
TRIM13-204ENST00000420995 EMBQ6PCB8 327 aa17.58■□□□□ 0.4
TRIM13-204ENST00000420995 REXO1Q8N1G1 1221 aaKnown RBP17.58■□□□□ 0.4
TRIM13-204ENST00000420995 SH2D3CQ8N5H7 860 aa17.58■□□□□ 0.4
TRIM13-204ENST00000420995 ANKRD2Q9GZV1 360 aa17.58■□□□□ 0.4
TRIM13-204ENST00000420995 UBA5Q9GZZ9 404 aa17.58■□□□□ 0.4
TRIM13-204ENST00000420995 GOLGA8KD6RF30 607 aa17.57■□□□□ 0.4
TRIM13-204ENST00000420995 TDP2O95551 362 aa17.57■□□□□ 0.4
TRIM13-204ENST00000420995 CALCRLQ16602 461 aa17.57■□□□□ 0.4
TRIM13-204ENST00000420995 HGSNATQ68CP4 663 aa17.57■□□□□ 0.4
TRIM13-204ENST00000420995 SPTY2D1Q68D10 685 aaPredicted RBP17.57■□□□□ 0.4
TRIM13-204ENST00000420995 KCTD16Q68DU8 428 aa17.57■□□□□ 0.4
TRIM13-204ENST00000420995 KCNK18Q7Z418 384 aa17.57■□□□□ 0.4
TRIM13-204ENST00000420995 TADA2BQ86TJ2 420 aa17.57■□□□□ 0.4
TRIM13-204ENST00000420995 CDK5RAP3Q96JB5 506 aa17.57■□□□□ 0.4
TRIM13-204ENST00000420995 NLRP3Q96P20 1036 aa17.57■□□□□ 0.4
TRIM13-204ENST00000420995 RUFY1Q96T51 708 aa17.57■□□□□ 0.4
TRIM13-204ENST00000420995 SEC63Q9UGP8 760 aaKnown RBP17.57■□□□□ 0.4
TRIM13-204ENST00000420995 KRT14P02533 472 aa17.57■□□□□ 0.4
TRIM13-204ENST00000420995 GLI1P08151 1106 aa17.57■□□□□ 0.4
TRIM13-204ENST00000420995 APBA1Q02410 837 aa17.57■□□□□ 0.4
TRIM13-204ENST00000420995 GUF1Q8N442 669 aaKnown RBP17.57■□□□□ 0.4
TRIM13-204ENST00000420995 NOX5Q96PH1 765 aa17.57■□□□□ 0.4
TRIM13-204ENST00000420995 LZTS2Q9BRK4 669 aa17.57■□□□□ 0.4
TRIM13-204ENST00000420995 CDCA7Q9BWT1 371 aaPredicted RBP17.57■□□□□ 0.4
TRIM13-204ENST00000420995 THRAP3Q9Y2W1 955 aaKnown RBP17.57■□□□□ 0.4
TRIM13-204ENST00000420995 EP400Q96L91 3159 aa17.56■□□□□ 0.4
TRIM13-204ENST00000420995 PJA2O43164 708 aa17.56■□□□□ 0.4
TRIM13-204ENST00000420995 KCNMA1Q12791 1236 aa17.56■□□□□ 0.4
TRIM13-204ENST00000420995 SLC10A5Q5PT55 438 aa17.56■□□□□ 0.4
TRIM13-204ENST00000420995 RUBCNQ92622 972 aa17.56■□□□□ 0.4
TRIM13-204ENST00000420995 ZIM3Q96PE6 472 aa17.56■□□□□ 0.4
TRIM13-204ENST00000420995 MTMR9Q96QG7 549 aa17.56■□□□□ 0.4
TRIM13-204ENST00000420995 EYA3Q99504 573 aa17.56■□□□□ 0.4
TRIM13-204ENST00000420995 EBAG9O00559 213 aa17.56■□□□□ 0.4
TRIM13-204ENST00000420995 OPA1O60313 960 aa17.56■□□□□ 0.4
TRIM13-204ENST00000420995 HSF2BPO75031 334 aa17.56■□□□□ 0.4
TRIM13-204ENST00000420995 FTCDO95954 541 aa17.56■□□□□ 0.4
TRIM13-204ENST00000420995 FAM153BP0C7A2 387 aa17.56■□□□□ 0.4
TRIM13-204ENST00000420995 CARSP49589 748 aaKnown RBP17.56■□□□□ 0.4
TRIM13-204ENST00000420995 PDCLQ13371 301 aa17.56■□□□□ 0.4
TRIM13-204ENST00000420995 FAM153CQ494X1 144 aa17.56■□□□□ 0.4
TRIM13-204ENST00000420995 MICALL1Q8N3F8 863 aa17.56■□□□□ 0.4
TRIM13-204ENST00000420995 DDX12PQ92771 950 aa17.56■□□□□ 0.4
TRIM13-204ENST00000420995 KANSL2Q9H9L4 492 aa17.56■□□□□ 0.4
TRIM13-204ENST00000420995 SRP68Q9UHB9 627 aaKnown RBP17.56■□□□□ 0.4
TRIM13-204ENST00000420995 FAM153AQ9UHL3 310 aa17.56■□□□□ 0.4
TRIM13-204ENST00000420995 NFU1Q9UMS0 254 aa17.56■□□□□ 0.4
TRIM13-204ENST00000420995 FAM169AQ9Y6X4 670 aa17.56■□□□□ 0.4
TRIM13-204ENST00000420995 SNED1Q8TER0 1413 aa17.56■□□□□ 0.4
TRIM13-204ENST00000420995 PVALEFA0A1B0GWK0 134 aa17.55■□□□□ 0.4
TRIM13-204ENST00000420995 TLR2O60603 784 aa17.55■□□□□ 0.4
TRIM13-204ENST00000420995 LIG3P49916 1009 aa17.55■□□□□ 0.4
TRIM13-204ENST00000420995 LRRC63Q05C16 580 aa17.55■□□□□ 0.4
TRIM13-204ENST00000420995 NBPF5PQ86XG9 351 aaPredicted RBP17.55■□□□□ 0.4
TRIM13-204ENST00000420995 CAVIN3Q969G5 261 aa17.55■□□□□ 0.4
TRIM13-204ENST00000420995 GPR101Q96P66 508 aaPredicted RBP17.55■□□□□ 0.4
TRIM13-204ENST00000420995 STK17AQ9UEE5 414 aa17.55■□□□□ 0.4
TRIM13-204ENST00000420995 PACSIN2Q9UNF0 486 aaPredicted RBP17.55■□□□□ 0.4
TRIM13-204ENST00000420995 SAMM50Q9Y512 469 aa17.55■□□□□ 0.4
TRIM13-204ENST00000420995 MAST2Q6P0Q8 1798 aa17.55■□□□□ 0.4
TRIM13-204ENST00000420995 IRS2Q9Y4H2 1338 aa17.55■□□□□ 0.4
TRIM13-204ENST00000420995 ATP1A2P50993 1020 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms