RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 GPR25O00155 361 aa16.16■□□□□ 0.18
SHMT1P1-201ENST00000419974 MEIS1O00470 390 aa16.16■□□□□ 0.18
SHMT1P1-201ENST00000419974 TAL1P17542 331 aaPredicted RBP16.16■□□□□ 0.18
SHMT1P1-201ENST00000419974 ATP2B1P20020 1258 aa16.16■□□□□ 0.18
SHMT1P1-201ENST00000419974 SETQ01105 290 aaPredicted RBP16.16■□□□□ 0.18
SHMT1P1-201ENST00000419974 PKN2Q16513 984 aaKnown RBP16.16■□□□□ 0.18
SHMT1P1-201ENST00000419974 FAM110CQ1W6H9 321 aa16.16■□□□□ 0.18
SHMT1P1-201ENST00000419974 SAMD1Q6SPF0 538 aaPredicted RBP16.16■□□□□ 0.18
SHMT1P1-201ENST00000419974 CTU1Q7Z7A3 348 aaKnown RBP16.16■□□□□ 0.18
SHMT1P1-201ENST00000419974 SLFN12Q8IYM2 578 aa16.16■□□□□ 0.18
SHMT1P1-201ENST00000419974 FMR1NBQ8N0W7 255 aaPredicted RBP16.16■□□□□ 0.18
SHMT1P1-201ENST00000419974 IGSF22Q8N9C0 903 aa16.16■□□□□ 0.18
SHMT1P1-201ENST00000419974 NSUN6Q8TEA1 469 aaKnown RBP16.16■□□□□ 0.18
SHMT1P1-201ENST00000419974 LENG9Q96B70 501 aa16.16■□□□□ 0.18
SHMT1P1-201ENST00000419974 TMEM60Q9H2L4 133 aa16.16■□□□□ 0.18
SHMT1P1-201ENST00000419974 COL20A1Q9P218 1284 aa16.16■□□□□ 0.18
SHMT1P1-201ENST00000419974 COL11A1P12107 1806 aaPredicted RBP16.15■□□□□ 0.18
SHMT1P1-201ENST00000419974 MAFGO15525 162 aa16.15■□□□□ 0.18
SHMT1P1-201ENST00000419974 STRNO43815 780 aa16.15■□□□□ 0.18
SHMT1P1-201ENST00000419974 LETM1O95202 739 aaPredicted RBP16.15■□□□□ 0.18
SHMT1P1-201ENST00000419974 TDP2O95551 362 aa16.15■□□□□ 0.18
SHMT1P1-201ENST00000419974 BAATQ14032 418 aaPredicted RBP16.15■□□□□ 0.18
SHMT1P1-201ENST00000419974 IL17AQ16552 155 aa16.15■□□□□ 0.18
SHMT1P1-201ENST00000419974 Q3C1V9 767 aa16.15■□□□□ 0.18
SHMT1P1-201ENST00000419974 CEP55Q53EZ4 464 aa16.15■□□□□ 0.18
SHMT1P1-201ENST00000419974 VSIG10LQ86VR7 867 aa16.15■□□□□ 0.18
SHMT1P1-201ENST00000419974 CCAR1Q8IX12 1150 aaKnown RBP16.15■□□□□ 0.18
SHMT1P1-201ENST00000419974 ETNPPLQ8TBG4 499 aa16.15■□□□□ 0.18
SHMT1P1-201ENST00000419974 ZNF296Q8WUU4 475 aaPredicted RBP16.15■□□□□ 0.18
SHMT1P1-201ENST00000419974 PDCD2LQ9BRP1 358 aa16.15■□□□□ 0.18
SHMT1P1-201ENST00000419974 PXMP2Q9NR77 195 aa16.15■□□□□ 0.18
SHMT1P1-201ENST00000419974 STK24Q9Y6E0 443 aa16.15■□□□□ 0.18
SHMT1P1-201ENST00000419974 RBBP6Q7Z6E9 1792 aaKnown RBP16.15■□□□□ 0.18
SHMT1P1-201ENST00000419974 DNAJC25-GNG10A0A024R161 153 aa16.14■□□□□ 0.17
SHMT1P1-201ENST00000419974 FAM86B1E9PN63 330 aa16.14■□□□□ 0.17
SHMT1P1-201ENST00000419974 SLC37A4O43826 429 aa16.14■□□□□ 0.17
SHMT1P1-201ENST00000419974 FAM86B2P0C5J1 330 aa16.14■□□□□ 0.17
SHMT1P1-201ENST00000419974 CYP2C8P10632 490 aa16.14■□□□□ 0.17
SHMT1P1-201ENST00000419974 ERCC3P19447 782 aa16.14■□□□□ 0.17
SHMT1P1-201ENST00000419974 CALCRLQ16602 461 aa16.14■□□□□ 0.17
SHMT1P1-201ENST00000419974 SLC30A10Q6XR72 485 aa16.14■□□□□ 0.17
SHMT1P1-201ENST00000419974 CCDC73Q6ZRK6 1079 aa16.14■□□□□ 0.17
SHMT1P1-201ENST00000419974 FCHSD1Q86WN1 690 aa16.14■□□□□ 0.17
SHMT1P1-201ENST00000419974 KCTD17Q8N5Z5 321 aa16.14■□□□□ 0.17
SHMT1P1-201ENST00000419974 SMCR8Q8TEV9 937 aaPredicted RBP16.14■□□□□ 0.17
SHMT1P1-201ENST00000419974 HAS1Q92839 578 aa16.14■□□□□ 0.17
SHMT1P1-201ENST00000419974 RMDN3Q96TC7 470 aa16.14■□□□□ 0.17
SHMT1P1-201ENST00000419974 RAB34Q9BZG1 259 aa16.14■□□□□ 0.17
SHMT1P1-201ENST00000419974 CCSER1Q9C0I3 900 aa16.14■□□□□ 0.17
SHMT1P1-201ENST00000419974 HOMER2Q9NSB8 354 aa16.14■□□□□ 0.17
SHMT1P1-201ENST00000419974 FAM13BQ9NYF5 915 aa16.14■□□□□ 0.17
SHMT1P1-201ENST00000419974 USP25Q9UHP3 1055 aa16.14■□□□□ 0.17
SHMT1P1-201ENST00000419974 UBIAD1Q9Y5Z9 338 aa16.14■□□□□ 0.17
SHMT1P1-201ENST00000419974 SMCHD1A6NHR9 2005 aa16.13■□□□□ 0.17
SHMT1P1-201ENST00000419974 IGF2BP3O00425 579 aaKnown RBP eCLIP16.13■□□□□ 0.17
SHMT1P1-201ENST00000419974 LIG1P18858 919 aa16.13■□□□□ 0.17
SHMT1P1-201ENST00000419974 EDNRBP24530 442 aa16.13■□□□□ 0.17
SHMT1P1-201ENST00000419974 RGS19P49795 217 aa16.13■□□□□ 0.17
SHMT1P1-201ENST00000419974 PLS1Q14651 629 aa16.13■□□□□ 0.17
SHMT1P1-201ENST00000419974 PGM5Q15124 567 aa16.13■□□□□ 0.17
SHMT1P1-201ENST00000419974 NSMFQ6X4W1 530 aa16.13■□□□□ 0.17
SHMT1P1-201ENST00000419974 RBM43Q6ZSC3 357 aaKnown RBP16.13■□□□□ 0.17
SHMT1P1-201ENST00000419974 POTEDQ86YR6 584 aa16.13■□□□□ 0.17
SHMT1P1-201ENST00000419974 FAM133AQ8N9E0 248 aa16.13■□□□□ 0.17
SHMT1P1-201ENST00000419974 FSIP1Q8NA03 581 aa16.13■□□□□ 0.17
SHMT1P1-201ENST00000419974 CLIC6Q96NY7 704 aa16.13■□□□□ 0.17
SHMT1P1-201ENST00000419974 TAAR1Q96RJ0 339 aa16.13■□□□□ 0.17
SHMT1P1-201ENST00000419974 MXRA8Q9BRK3 442 aa16.13■□□□□ 0.17
SHMT1P1-201ENST00000419974 CSRNP2Q9H175 543 aa16.13■□□□□ 0.17
SHMT1P1-201ENST00000419974 ADD3Q9UEY8 706 aaKnown RBP16.13■□□□□ 0.17
SHMT1P1-201ENST00000419974 CCDC85CA6NKD9 419 aa16.12■□□□□ 0.17
SHMT1P1-201ENST00000419974 B4DLN1 442 aa16.12■□□□□ 0.17
SHMT1P1-201ENST00000419974 CTAGE5O15320 804 aa16.12■□□□□ 0.17
SHMT1P1-201ENST00000419974 FKTNO75072 461 aa16.12■□□□□ 0.17
SHMT1P1-201ENST00000419974 NR1I2O75469 434 aa16.12■□□□□ 0.17
SHMT1P1-201ENST00000419974 PFKFB1P16118 471 aa16.12■□□□□ 0.17
SHMT1P1-201ENST00000419974 NDUFA8P51970 172 aa16.12■□□□□ 0.17
SHMT1P1-201ENST00000419974 GRIN1Q05586 938 aa16.12■□□□□ 0.17
SHMT1P1-201ENST00000419974 TMEM266Q2M3C6 531 aa16.12■□□□□ 0.17
SHMT1P1-201ENST00000419974 CCDC183Q5T5S1 534 aa16.12■□□□□ 0.17
SHMT1P1-201ENST00000419974 ANKRD35Q8N283 1001 aa16.12■□□□□ 0.17
SHMT1P1-201ENST00000419974 MORC4Q8TE76 937 aa16.12■□□□□ 0.17
SHMT1P1-201ENST00000419974 GOLPH3LQ9H4A5 285 aa16.12■□□□□ 0.17
SHMT1P1-201ENST00000419974 JADE2Q9NQC1 790 aa16.12■□□□□ 0.17
SHMT1P1-201ENST00000419974 DACT1Q9NYF0 836 aa16.12■□□□□ 0.17
SHMT1P1-201ENST00000419974 TMEM63CQ9P1W3 806 aa16.12■□□□□ 0.17
SHMT1P1-201ENST00000419974 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.12■□□□□ 0.17
SHMT1P1-201ENST00000419974 KCNH3Q9ULD8 1083 aa16.12■□□□□ 0.17
SHMT1P1-201ENST00000419974 MRVI1Q9Y6F6 885 aa16.12■□□□□ 0.17
SHMT1P1-201ENST00000419974 VWA3AA6NCI4 1184 aa16.11■□□□□ 0.17
SHMT1P1-201ENST00000419974 TLR2O60603 784 aa16.11■□□□□ 0.17
SHMT1P1-201ENST00000419974 MAPK4P31152 587 aa16.11■□□□□ 0.17
SHMT1P1-201ENST00000419974 MRPS9P82933 396 aaKnown RBP16.11■□□□□ 0.17
SHMT1P1-201ENST00000419974 ARHGEF16Q5VV41 709 aa16.11■□□□□ 0.17
SHMT1P1-201ENST00000419974 C17orf99Q6UX52 265 aa16.11■□□□□ 0.17
SHMT1P1-201ENST00000419974 NCAPG2Q86XI2 1143 aa16.11■□□□□ 0.17
SHMT1P1-201ENST00000419974 SLC5A5Q92911 643 aa16.11■□□□□ 0.17
SHMT1P1-201ENST00000419974 INPP4AQ96PE3 977 aaPredicted RBP16.11■□□□□ 0.17
SHMT1P1-201ENST00000419974 RIT2Q99578 217 aa16.11■□□□□ 0.17
SHMT1P1-201ENST00000419974 PAGR1Q9BTK6 254 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms