RNA–Protein interactions for RNA: ENST00000419964.1

EPHA4-205, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 552 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-205ENST00000419964 SCARF2Q96GP6 870 aaPredicted RBP8.45□□□□□ -1.06
EPHA4-205ENST00000419964 KRT23Q9C075 422 aa8.45□□□□□ -1.06
EPHA4-205ENST00000419964 RNF41Q9H4P4 317 aaPredicted RBP8.45□□□□□ -1.06
EPHA4-205ENST00000419964 IGSF5Q9NSI5 407 aa8.45□□□□□ -1.06
EPHA4-205ENST00000419964 LRP2BPQ9P2M1 347 aa8.45□□□□□ -1.06
EPHA4-205ENST00000419964 TPCN1Q9ULQ1 816 aa8.45□□□□□ -1.06
EPHA4-205ENST00000419964 LEMD3Q9Y2U8 911 aa8.45□□□□□ -1.06
EPHA4-205ENST00000419964 ZNF532Q9HCE3 1301 aa8.45□□□□□ -1.06
EPHA4-205ENST00000419964 DOCK2Q92608 1830 aa8.45□□□□□ -1.06
EPHA4-205ENST00000419964 C4AP0C0L4 1744 aa8.44□□□□□ -1.06
EPHA4-205ENST00000419964 A0A0A0MRY4 1105 aa8.44□□□□□ -1.06
EPHA4-205ENST00000419964 CDKL5O76039 1030 aa8.44□□□□□ -1.06
EPHA4-205ENST00000419964 LETM1O95202 739 aaPredicted RBP8.44□□□□□ -1.06
EPHA4-205ENST00000419964 F13A1P00488 732 aa8.44□□□□□ -1.06
EPHA4-205ENST00000419964 FGAP02671 866 aa8.44□□□□□ -1.06
EPHA4-205ENST00000419964 MRE11P49959 708 aa8.44□□□□□ -1.06
EPHA4-205ENST00000419964 AP3B2Q13367 1082 aa8.44□□□□□ -1.06
EPHA4-205ENST00000419964 GRAPQ13588 217 aa8.44□□□□□ -1.06
EPHA4-205ENST00000419964 PWP1Q13610 501 aa8.44□□□□□ -1.06
EPHA4-205ENST00000419964 SART3Q15020 963 aaKnown RBP8.44□□□□□ -1.06
EPHA4-205ENST00000419964 SUZ12Q15022 739 aaKnown RBP8.44□□□□□ -1.06
EPHA4-205ENST00000419964 PRRT3Q5FWE3 981 aa8.44□□□□□ -1.06
EPHA4-205ENST00000419964 ATL3Q6DD88 541 aa8.44□□□□□ -1.06
EPHA4-205ENST00000419964 GIMAP6Q6P9H5 292 aa8.44□□□□□ -1.06
EPHA4-205ENST00000419964 CPLX2Q6PUV4 134 aaKnown RBP8.44□□□□□ -1.06
EPHA4-205ENST00000419964 FAM184AQ8NB25 1140 aa8.44□□□□□ -1.06
EPHA4-205ENST00000419964 GRAPLQ8TC17 118 aaPredicted RBP8.44□□□□□ -1.06
EPHA4-205ENST00000419964 BRF1Q92994 677 aa8.44□□□□□ -1.06
EPHA4-205ENST00000419964 RBM17Q96I25 401 aaKnown RBP8.44□□□□□ -1.06
EPHA4-205ENST00000419964 TMEM87BQ96K49 555 aa8.44□□□□□ -1.06
EPHA4-205ENST00000419964 PUS7LQ9H0K6 701 aaKnown RBP8.44□□□□□ -1.06
EPHA4-205ENST00000419964 NAPBQ9H115 298 aa8.44□□□□□ -1.06
EPHA4-205ENST00000419964 ZSCAN16Q9H4T2 348 aaPredicted RBP8.44□□□□□ -1.06
EPHA4-205ENST00000419964 SRP68Q9UHB9 627 aaKnown RBP8.44□□□□□ -1.06
EPHA4-205ENST00000419964 GGT7Q9UJ14 662 aa8.44□□□□□ -1.06
EPHA4-205ENST00000419964 AKAP11Q9UKA4 1901 aa8.44□□□□□ -1.06
EPHA4-205ENST00000419964 TCRBV5S4A2TA0A5A2 114 aa8.43□□□□□ -1.06
EPHA4-205ENST00000419964 BBOX1O75936 387 aa8.43□□□□□ -1.06
EPHA4-205ENST00000419964 CYP11A1P05108 521 aa8.43□□□□□ -1.06
EPHA4-205ENST00000419964 CELA3AP09093 270 aa8.43□□□□□ -1.06
EPHA4-205ENST00000419964 CPA1P15085 419 aa8.43□□□□□ -1.06
EPHA4-205ENST00000419964 HIBADHP31937 336 aaKnown RBP8.43□□□□□ -1.06
EPHA4-205ENST00000419964 HDLBPQ00341 1268 aaKnown RBP8.43□□□□□ -1.06
EPHA4-205ENST00000419964 C15orf52Q6ZUT6 534 aaKnown RBP8.43□□□□□ -1.06
EPHA4-205ENST00000419964 FBXO11Q86XK2 927 aa8.43□□□□□ -1.06
EPHA4-205ENST00000419964 FMR1NBQ8N0W7 255 aaPredicted RBP8.43□□□□□ -1.06
EPHA4-205ENST00000419964 NLGN1Q8N2Q7 840 aa8.43□□□□□ -1.06
EPHA4-205ENST00000419964 TMTC2Q8N394 836 aa8.43□□□□□ -1.06
EPHA4-205ENST00000419964 MAGEB6Q8N7X4 407 aa8.43□□□□□ -1.06
EPHA4-205ENST00000419964 WDR66Q8TBY9 1149 aa8.43□□□□□ -1.06
EPHA4-205ENST00000419964 ANP32BQ92688 251 aaKnown RBP8.43□□□□□ -1.06
EPHA4-205ENST00000419964 KLHDC7BQ96G42 594 aa8.43□□□□□ -1.06
EPHA4-205ENST00000419964 STRBPQ96SI9 672 aaKnown RBP8.43□□□□□ -1.06
EPHA4-205ENST00000419964 RSRP1Q9BUV0 290 aa8.43□□□□□ -1.06
EPHA4-205ENST00000419964 EMILIN2Q9BXX0 1053 aa8.43□□□□□ -1.06
EPHA4-205ENST00000419964 SCAND2PQ9GZW5 306 aaPredicted RBP8.43□□□□□ -1.06
EPHA4-205ENST00000419964 PIH1D3Q9NQM4 214 aaKnown RBP8.43□□□□□ -1.06
EPHA4-205ENST00000419964 LMBRD1Q9NUN5 540 aa8.43□□□□□ -1.06
EPHA4-205ENST00000419964 ZDHHC9Q9Y397 364 aa8.43□□□□□ -1.06
EPHA4-205ENST00000419964 XDHP47989 1333 aa8.43□□□□□ -1.06
EPHA4-205ENST00000419964 CNTNAP5Q8WYK1 1306 aa8.43□□□□□ -1.06
EPHA4-205ENST00000419964 ERICH2A1L162 156 aa8.42□□□□□ -1.06
EPHA4-205ENST00000419964 H3BQV1 296 aa8.42□□□□□ -1.06
EPHA4-205ENST00000419964 PRC1O43663 620 aa8.42□□□□□ -1.06
EPHA4-205ENST00000419964 DEAF1O75398 565 aaPredicted RBP8.42□□□□□ -1.06
EPHA4-205ENST00000419964 SLC3A2P08195 630 aaKnown RBP8.42□□□□□ -1.06
EPHA4-205ENST00000419964 NME2P22392 152 aa8.42□□□□□ -1.06
EPHA4-205ENST00000419964 CD68P34810 354 aaPredicted RBP8.42□□□□□ -1.06
EPHA4-205ENST00000419964 TDO2P48775 406 aa8.42□□□□□ -1.06
EPHA4-205ENST00000419964 RCAN1P53805 252 aa8.42□□□□□ -1.06
EPHA4-205ENST00000419964 KRT85P78386 507 aa8.42□□□□□ -1.06
EPHA4-205ENST00000419964 GSTO1P78417 241 aa8.42□□□□□ -1.06
EPHA4-205ENST00000419964 NFIXQ14938 502 aa8.42□□□□□ -1.06
EPHA4-205ENST00000419964 PPP2R5BQ15173 497 aa8.42□□□□□ -1.06
EPHA4-205ENST00000419964 CRY2Q49AN0 593 aa8.42□□□□□ -1.06
EPHA4-205ENST00000419964 HGSNATQ68CP4 663 aa8.42□□□□□ -1.06
EPHA4-205ENST00000419964 NAA16Q6N069 864 aaPredicted RBP8.42□□□□□ -1.06
EPHA4-205ENST00000419964 SYNE3Q6ZMZ3 975 aa8.42□□□□□ -1.06
EPHA4-205ENST00000419964 ZNF804AQ7Z570 1209 aa8.42□□□□□ -1.06
EPHA4-205ENST00000419964 RELL1Q8IUW5 271 aa8.42□□□□□ -1.06
EPHA4-205ENST00000419964 SMARCC2Q8TAQ2 1214 aa8.42□□□□□ -1.06
EPHA4-205ENST00000419964 CELF1Q92879 486 aaKnown RBP8.42□□□□□ -1.06
EPHA4-205ENST00000419964 TMX4Q9H1E5 349 aaPredicted RBP8.42□□□□□ -1.06
EPHA4-205ENST00000419964 RAI14Q9P0K7 980 aa8.42□□□□□ -1.06
EPHA4-205ENST00000419964 UBR3Q6ZT12 1888 aa8.42□□□□□ -1.06
EPHA4-205ENST00000419964 A0A1B0GUL6 1792 aa8.41□□□□□ -1.06
EPHA4-205ENST00000419964 RGPD3A6NKT7 1758 aaPredicted RBP8.41□□□□□ -1.06
EPHA4-205ENST00000419964 RGPD4Q7Z3J3 1758 aa8.41□□□□□ -1.06
EPHA4-205ENST00000419964 ELP1O95163 1332 aa8.41□□□□□ -1.06
EPHA4-205ENST00000419964 SALL1Q9NSC2 1324 aa8.41□□□□□ -1.06
EPHA4-205ENST00000419964 VPS37CA5D8V6 355 aaPredicted RBP8.41□□□□□ -1.06
EPHA4-205ENST00000419964 CPLX1O14810 134 aa8.41□□□□□ -1.06
EPHA4-205ENST00000419964 MBD4O95243 580 aa8.41□□□□□ -1.06
EPHA4-205ENST00000419964 SERPINB2P05120 415 aa8.41□□□□□ -1.06
EPHA4-205ENST00000419964 LDHCP07864 332 aa8.41□□□□□ -1.06
EPHA4-205ENST00000419964 GYS1P13807 737 aa8.41□□□□□ -1.06
EPHA4-205ENST00000419964 ARNTP27540 789 aa8.41□□□□□ -1.06
EPHA4-205ENST00000419964 HOXA10P31260 410 aaPredicted RBP8.41□□□□□ -1.06
EPHA4-205ENST00000419964 LIFRP42702 1097 aa8.41□□□□□ -1.06
EPHA4-205ENST00000419964 UBE2HP62256 183 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms