RNA–Protein interactions for RNA: ENST00000419442.1

RAPGEF1-205, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-205ENST00000419442 TMEM192Q8IY95 271 aa12.48□□□□□ -0.41
RAPGEF1-205ENST00000419442 FRAT1Q92837 279 aaPredicted RBP12.48□□□□□ -0.41
RAPGEF1-205ENST00000419442 HAUS7Q99871 368 aa12.48□□□□□ -0.41
RAPGEF1-205ENST00000419442 CCPG1Q9ULG6 757 aa12.48□□□□□ -0.41
RAPGEF1-205ENST00000419442 LOC730098B7Z3J9 87 aa12.47□□□□□ -0.41
RAPGEF1-205ENST00000419442 C5orf67F2Z3F1 127 aa12.47□□□□□ -0.41
RAPGEF1-205ENST00000419442 TBX10O75333 385 aa12.47□□□□□ -0.41
RAPGEF1-205ENST00000419442 MMP3P08254 477 aa12.47□□□□□ -0.41
RAPGEF1-205ENST00000419442 ATP5JP18859 108 aa12.47□□□□□ -0.41
RAPGEF1-205ENST00000419442 NUBP1P53384 320 aa12.47□□□□□ -0.41
RAPGEF1-205ENST00000419442 VCPP55072 806 aaKnown RBP12.47□□□□□ -0.41
RAPGEF1-205ENST00000419442 SNAP25P60880 206 aa12.47□□□□□ -0.41
RAPGEF1-205ENST00000419442 HYAL1Q12794 435 aa12.47□□□□□ -0.41
RAPGEF1-205ENST00000419442 PTK7Q13308 1070 aa12.47□□□□□ -0.41
RAPGEF1-205ENST00000419442 CBX2Q14781 532 aaPredicted RBP12.47□□□□□ -0.41
RAPGEF1-205ENST00000419442 HSP90AB4PQ58FF6 505 aa12.47□□□□□ -0.41
RAPGEF1-205ENST00000419442 ZKSCAN2Q63HK3 967 aa12.47□□□□□ -0.41
RAPGEF1-205ENST00000419442 RCSD1Q6JBY9 416 aa12.47□□□□□ -0.41
RAPGEF1-205ENST00000419442 CCDC62Q6P9F0 684 aa12.47□□□□□ -0.41
RAPGEF1-205ENST00000419442 ZNF444Q8N0Y2 327 aaPredicted RBP12.47□□□□□ -0.41
RAPGEF1-205ENST00000419442 STK11IPQ8N1F8 1099 aa12.47□□□□□ -0.41
RAPGEF1-205ENST00000419442 CLASRPQ8N2M8 674 aaKnown RBP12.47□□□□□ -0.41
RAPGEF1-205ENST00000419442 WNT8BQ93098 351 aa12.47□□□□□ -0.41
RAPGEF1-205ENST00000419442 LMAN2LQ9H0V9 348 aa12.47□□□□□ -0.41
RAPGEF1-205ENST00000419442 RANBP17Q9H2T7 1088 aaKnown RBP12.47□□□□□ -0.41
RAPGEF1-205ENST00000419442 ZNF287Q9HBT7 754 aa12.47□□□□□ -0.41
RAPGEF1-205ENST00000419442 RIF1Q5UIP0 2472 aaKnown RBP12.47□□□□□ -0.41
RAPGEF1-205ENST00000419442 EMSYQ7Z589 1322 aa12.46□□□□□ -0.41
RAPGEF1-205ENST00000419442 C5orf42Q9H799 3197 aa12.46□□□□□ -0.41
RAPGEF1-205ENST00000419442 MINDY4BA8MYZ0 360 aa12.46□□□□□ -0.41
RAPGEF1-205ENST00000419442 NFIBO00712 420 aa12.46□□□□□ -0.41
RAPGEF1-205ENST00000419442 PRDM1O75626 825 aa12.46□□□□□ -0.41
RAPGEF1-205ENST00000419442 ARIH2O95376 493 aa12.46□□□□□ -0.41
RAPGEF1-205ENST00000419442 EYA4O95677 639 aa12.46□□□□□ -0.41
RAPGEF1-205ENST00000419442 TXNP10599 105 aaKnown RBP12.46□□□□□ -0.41
RAPGEF1-205ENST00000419442 MCCP23508 829 aa12.46□□□□□ -0.41
RAPGEF1-205ENST00000419442 AVPR2P30518 371 aa12.46□□□□□ -0.41
RAPGEF1-205ENST00000419442 SIGLEC14Q08ET2 396 aa12.46□□□□□ -0.41
RAPGEF1-205ENST00000419442 IKQ13123 557 aaPredicted RBP12.46□□□□□ -0.41
RAPGEF1-205ENST00000419442 CLUL1Q15846 466 aa12.46□□□□□ -0.41
RAPGEF1-205ENST00000419442 ZNF618Q5T7W0 954 aa12.46□□□□□ -0.41
RAPGEF1-205ENST00000419442 ASCL5Q7RTU5 278 aa12.46□□□□□ -0.41
RAPGEF1-205ENST00000419442 MYOCDQ8IZQ8 938 aa12.46□□□□□ -0.41
RAPGEF1-205ENST00000419442 DBF4BQ8NFT6 615 aa12.46□□□□□ -0.41
RAPGEF1-205ENST00000419442 ATOH1Q92858 354 aaPredicted RBP12.46□□□□□ -0.41
RAPGEF1-205ENST00000419442 TOP1MTQ969P6 601 aa12.46□□□□□ -0.41
RAPGEF1-205ENST00000419442 ASIC4Q96FT7 647 aa12.46□□□□□ -0.41
RAPGEF1-205ENST00000419442 BOLA2Q9H3K6 86 aa12.46□□□□□ -0.41
RAPGEF1-205ENST00000419442 EPB41L4AQ9HCS5 686 aaPredicted RBP12.46□□□□□ -0.41
RAPGEF1-205ENST00000419442 HDAC6Q9UBN7 1215 aa12.46□□□□□ -0.41
RAPGEF1-205ENST00000419442 CD207Q9UJ71 328 aa12.46□□□□□ -0.41
RAPGEF1-205ENST00000419442 U3KPZ7 1027 aaPredicted RBP12.46□□□□□ -0.41
RAPGEF1-205ENST00000419442 RBAK-RBAKDNI3L0D1 243 aa12.45□□□□□ -0.42
RAPGEF1-205ENST00000419442 HAS3O00219 553 aa12.45□□□□□ -0.42
RAPGEF1-205ENST00000419442 RB1P06400 928 aa12.45□□□□□ -0.42
RAPGEF1-205ENST00000419442 IFIT2P09913 472 aaKnown RBP12.45□□□□□ -0.42
RAPGEF1-205ENST00000419442 LINC00271P0C7V0 271 aa12.45□□□□□ -0.42
RAPGEF1-205ENST00000419442 ARHGAP1Q07960 439 aa12.45□□□□□ -0.42
RAPGEF1-205ENST00000419442 PDE4DQ08499 809 aa12.45□□□□□ -0.42
RAPGEF1-205ENST00000419442 PLEKHG4Q58EX7 1191 aa12.45□□□□□ -0.42
RAPGEF1-205ENST00000419442 ZSCAN25Q6NSZ9 544 aa12.45□□□□□ -0.42
RAPGEF1-205ENST00000419442 SLC30A10Q6XR72 485 aa12.45□□□□□ -0.42
RAPGEF1-205ENST00000419442 KCTD1Q719H9 257 aa12.45□□□□□ -0.42
RAPGEF1-205ENST00000419442 DNERQ8NFT8 737 aa12.45□□□□□ -0.42
RAPGEF1-205ENST00000419442 AFG1LQ8WV93 481 aa12.45□□□□□ -0.42
RAPGEF1-205ENST00000419442 CLEC4DQ8WXI8 215 aa12.45□□□□□ -0.42
RAPGEF1-205ENST00000419442 KIF1BPQ96EK5 621 aa12.45□□□□□ -0.42
RAPGEF1-205ENST00000419442 MSLNLQ96KJ4 702 aa12.45□□□□□ -0.42
RAPGEF1-205ENST00000419442 MYH7BA7E2Y1 1941 aa12.45□□□□□ -0.42
RAPGEF1-205ENST00000419442 PRR23AA6NEV1 266 aa12.44□□□□□ -0.42
RAPGEF1-205ENST00000419442 ADAM15Q13444 863 aa12.44□□□□□ -0.42
RAPGEF1-205ENST00000419442 BTNL9Q6UXG8 535 aa12.44□□□□□ -0.42
RAPGEF1-205ENST00000419442 YME1L1Q96TA2 773 aa12.44□□□□□ -0.42
RAPGEF1-205ENST00000419442 MPHOSPH6Q99547 160 aaKnown RBP12.44□□□□□ -0.42
RAPGEF1-205ENST00000419442 FSD1Q9BTV5 496 aa12.44□□□□□ -0.42
RAPGEF1-205ENST00000419442 ISY1Q9ULR0 285 aaKnown RBP12.44□□□□□ -0.42
RAPGEF1-205ENST00000419442 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.43□□□□□ -0.42
RAPGEF1-205ENST00000419442 PTPDC1A2A3K4 754 aa12.43□□□□□ -0.42
RAPGEF1-205ENST00000419442 GRM6O15303 877 aa12.43□□□□□ -0.42
RAPGEF1-205ENST00000419442 F2P00734 622 aa12.43□□□□□ -0.42
RAPGEF1-205ENST00000419442 GH1P01241 217 aa12.43□□□□□ -0.42
RAPGEF1-205ENST00000419442 TSPY3P0CV98 308 aa12.43□□□□□ -0.42
RAPGEF1-205ENST00000419442 TSPY8P0CW00 308 aa12.43□□□□□ -0.42
RAPGEF1-205ENST00000419442 CASTP20810 708 aaKnown RBP12.43□□□□□ -0.42
RAPGEF1-205ENST00000419442 NBL1P41271 181 aa12.43□□□□□ -0.42
RAPGEF1-205ENST00000419442 NOVP48745 357 aa12.43□□□□□ -0.42
RAPGEF1-205ENST00000419442 PSEN2P49810 448 aa12.43□□□□□ -0.42
RAPGEF1-205ENST00000419442 CHMP4BP1P59074 171 aa12.43□□□□□ -0.42
RAPGEF1-205ENST00000419442 PDE4BQ07343 736 aa12.43□□□□□ -0.42
RAPGEF1-205ENST00000419442 PPP4R3BQ5MIZ7 849 aa12.43□□□□□ -0.42
RAPGEF1-205ENST00000419442 RNF207Q6ZRF8 634 aa12.43□□□□□ -0.42
RAPGEF1-205ENST00000419442 RASGRP2Q7LDG7 609 aa12.43□□□□□ -0.42
RAPGEF1-205ENST00000419442 C7orf31Q8N865 590 aa12.43□□□□□ -0.42
RAPGEF1-205ENST00000419442 KIAA1671Q9BY89 1806 aa12.43□□□□□ -0.42
RAPGEF1-205ENST00000419442 LINC01565O15544 149 aa12.42□□□□□ -0.42
RAPGEF1-205ENST00000419442 CALML3P27482 149 aa12.42□□□□□ -0.42
RAPGEF1-205ENST00000419442 GTF2F1P35269 517 aaKnown RBP eCLIP12.42□□□□□ -0.42
RAPGEF1-205ENST00000419442 RPS6P62753 249 aaKnown RBP12.42□□□□□ -0.42
RAPGEF1-205ENST00000419442 TFAP4Q01664 338 aa12.42□□□□□ -0.42
RAPGEF1-205ENST00000419442 HIC1Q14526 733 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms