RNA–Protein interactions for RNA: ENST00000419023.2

VPS45-203, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 3

Gene VPS45, Length 977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-203ENST00000419023 WHRNQ9P202 907 aa7.6□□□□□ -1.19
VPS45-203ENST00000419023 THRAP3Q9Y2W1 955 aaKnown RBP7.6□□□□□ -1.19
VPS45-203ENST00000419023 FHOD1Q9Y613 1164 aa7.6□□□□□ -1.19
VPS45-203ENST00000419023 ANKRD34BA5PLL1 514 aa7.59□□□□□ -1.19
VPS45-203ENST00000419023 H0Y8X5 98 aa7.59□□□□□ -1.19
VPS45-203ENST00000419023 GJB6O95452 261 aa7.59□□□□□ -1.19
VPS45-203ENST00000419023 RPL10P27635 214 aaKnown RBP7.59□□□□□ -1.19
VPS45-203ENST00000419023 IRAK1P51617 712 aa7.59□□□□□ -1.19
VPS45-203ENST00000419023 RNF111Q6ZNA4 994 aa7.59□□□□□ -1.19
VPS45-203ENST00000419023 LINC00116Q8NCU8 138 aa7.59□□□□□ -1.19
VPS45-203ENST00000419023 SREK1Q8WXA9 508 aaKnown RBP7.59□□□□□ -1.19
VPS45-203ENST00000419023 ZDHHC15Q96MV8 337 aa7.59□□□□□ -1.19
VPS45-203ENST00000419023 TRIM55Q9BYV6 548 aa7.59□□□□□ -1.19
VPS45-203ENST00000419023 TMEM59LQ9UK28 342 aa7.59□□□□□ -1.19
VPS45-203ENST00000419023 SUGT1Q9Y2Z0 365 aa7.59□□□□□ -1.19
VPS45-203ENST00000419023 PPLO60437 1756 aa7.59□□□□□ -1.2
VPS45-203ENST00000419023 KIAA0232Q92628 1395 aa7.59□□□□□ -1.2
VPS45-203ENST00000419023 PPM1BO75688 479 aa7.58□□□□□ -1.2
VPS45-203ENST00000419023 GSNP06396 782 aa7.58□□□□□ -1.2
VPS45-203ENST00000419023 BMP8BP34820 402 aa7.58□□□□□ -1.2
VPS45-203ENST00000419023 HK2P52789 917 aa7.58□□□□□ -1.2
VPS45-203ENST00000419023 RAB33AQ14088 237 aa7.58□□□□□ -1.2
VPS45-203ENST00000419023 CWF19L1Q69YN2 538 aaKnown RBP7.58□□□□□ -1.2
VPS45-203ENST00000419023 MRM1Q6IN84 353 aaKnown RBP7.58□□□□□ -1.2
VPS45-203ENST00000419023 SYTL4Q96C24 671 aaPredicted RBP7.58□□□□□ -1.2
VPS45-203ENST00000419023 APBA2Q99767 749 aa7.58□□□□□ -1.2
VPS45-203ENST00000419023 HIRIP3Q9BW71 556 aaPredicted RBP7.58□□□□□ -1.2
VPS45-203ENST00000419023 STK32BQ9NY57 414 aa7.58□□□□□ -1.2
VPS45-203ENST00000419023 APEX2Q9UBZ4 518 aa7.58□□□□□ -1.2
VPS45-203ENST00000419023 SF3B6Q9Y3B4 125 aaKnown RBP7.58□□□□□ -1.2
VPS45-203ENST00000419023 A0A087WZG4 1122 aa7.57□□□□□ -1.2
VPS45-203ENST00000419023 PLSCR1O15162 318 aa7.57□□□□□ -1.2
VPS45-203ENST00000419023 ZBTB7AO95365 584 aa7.57□□□□□ -1.2
VPS45-203ENST00000419023 VAV1P15498 845 aa7.57□□□□□ -1.2
VPS45-203ENST00000419023 GPR162Q16538 588 aa7.57□□□□□ -1.2
VPS45-203ENST00000419023 DDR2Q16832 855 aa7.57□□□□□ -1.2
VPS45-203ENST00000419023 ZPBP2Q6X784 338 aa7.57□□□□□ -1.2
VPS45-203ENST00000419023 PPP1R14AQ96A00 147 aa7.57□□□□□ -1.2
VPS45-203ENST00000419023 C19orf73Q9NVV2 129 aa7.57□□□□□ -1.2
VPS45-203ENST00000419023 ZMYM5Q9UJ78 669 aa7.57□□□□□ -1.2
VPS45-203ENST00000419023 CTNND2Q9UQB3 1225 aa7.57□□□□□ -1.2
VPS45-203ENST00000419023 DIS3Q9Y2L1 958 aaKnown RBP7.57□□□□□ -1.2
VPS45-203ENST00000419023 KNDC1Q76NI1 1749 aa7.56□□□□□ -1.2
VPS45-203ENST00000419023 NRAPQ86VF7 1730 aa7.56□□□□□ -1.2
VPS45-203ENST00000419023 TNS1Q9HBL0 1735 aaKnown RBP7.56□□□□□ -1.2
VPS45-203ENST00000419023 PIK3C2GO75747 1445 aa7.56□□□□□ -1.2
VPS45-203ENST00000419023 TMEM82A0PJX8 343 aa7.56□□□□□ -1.2
VPS45-203ENST00000419023 ZNF205O95201 554 aa7.56□□□□□ -1.2
VPS45-203ENST00000419023 ZGLP1P0C6A0 271 aa7.56□□□□□ -1.2
VPS45-203ENST00000419023 NAT2P11245 290 aa7.56□□□□□ -1.2
VPS45-203ENST00000419023 ZNF513Q8N8E2 541 aaPredicted RBP7.56□□□□□ -1.2
VPS45-203ENST00000419023 ARMC5Q96C12 935 aa7.56□□□□□ -1.2
VPS45-203ENST00000419023 CCDC120Q96HB5 630 aa7.56□□□□□ -1.2
VPS45-203ENST00000419023 SSH2Q76I76 1423 aa7.55□□□□□ -1.2
VPS45-203ENST00000419023 THSD7AQ9UPZ6 1657 aa7.55□□□□□ -1.2
VPS45-203ENST00000419023 SUSD5O60279 629 aa7.55□□□□□ -1.2
VPS45-203ENST00000419023 VAMP4O75379 141 aa7.55□□□□□ -1.2
VPS45-203ENST00000419023 GDNFP39905 211 aa7.55□□□□□ -1.2
VPS45-203ENST00000419023 ZNF143P52747 638 aaPredicted RBP7.55□□□□□ -1.2
VPS45-203ENST00000419023 ERVFC1P60507 584 aa7.55□□□□□ -1.2
VPS45-203ENST00000419023 DDB1Q16531 1140 aa7.55□□□□□ -1.2
VPS45-203ENST00000419023 ARHGEF39Q8N4T4 335 aa7.55□□□□□ -1.2
VPS45-203ENST00000419023 SYT17Q9BSW7 474 aa7.55□□□□□ -1.2
VPS45-203ENST00000419023 CDADC1Q9BWV3 514 aa7.55□□□□□ -1.2
VPS45-203ENST00000419023 LGR4Q9BXB1 951 aa7.55□□□□□ -1.2
VPS45-203ENST00000419023 MTFR1LQ9H019 292 aa7.55□□□□□ -1.2
VPS45-203ENST00000419023 CGGBP1Q9UFW8 167 aaPredicted RBP7.55□□□□□ -1.2
VPS45-203ENST00000419023 EBF1Q9UH73 591 aa7.55□□□□□ -1.2
VPS45-203ENST00000419023 AKT3Q9Y243 479 aa7.55□□□□□ -1.2
VPS45-203ENST00000419023 ZNF281Q9Y2X9 895 aa7.55□□□□□ -1.2
VPS45-203ENST00000419023 ABCA3Q99758 1704 aa7.55□□□□□ -1.2
VPS45-203ENST00000419023 IFT172Q9UG01 1749 aa7.55□□□□□ -1.2
VPS45-203ENST00000419023 OVOS2A0A0G2JMS6 1433 aa7.54□□□□□ -1.2
VPS45-203ENST00000419023 OVOS2A0A0J9YW53 1432 aa7.54□□□□□ -1.2
VPS45-203ENST00000419023 OVOS2Q6IE36 1432 aa7.54□□□□□ -1.2
VPS45-203ENST00000419023 RGPD8O14715 1765 aaPredicted RBP7.54□□□□□ -1.2
VPS45-203ENST00000419023 U2SURPO15042 1029 aaKnown RBP7.54□□□□□ -1.2
VPS45-203ENST00000419023 CD3EP07766 207 aa7.54□□□□□ -1.2
VPS45-203ENST00000419023 GSTM1P09488 218 aa7.54□□□□□ -1.2
VPS45-203ENST00000419023 TAL1P17542 331 aaPredicted RBP7.54□□□□□ -1.2
VPS45-203ENST00000419023 POU4F1Q01851 419 aa7.54□□□□□ -1.2
VPS45-203ENST00000419023 RBL2Q08999 1139 aa7.54□□□□□ -1.2
VPS45-203ENST00000419023 SV2CQ496J9 727 aa7.54□□□□□ -1.2
VPS45-203ENST00000419023 EEPD1Q7L9B9 569 aa7.54□□□□□ -1.2
VPS45-203ENST00000419023 RCC1LQ96I51 464 aaKnown RBP7.54□□□□□ -1.2
VPS45-203ENST00000419023 MPHOSPH9Q99550 1183 aa7.54□□□□□ -1.2
VPS45-203ENST00000419023 SLC12A9Q9BXP2 914 aa7.54□□□□□ -1.2
VPS45-203ENST00000419023 AP5S1Q9NUS5 200 aa7.54□□□□□ -1.2
VPS45-203ENST00000419023 SPATA31E1Q6ZUB1 1445 aa7.53□□□□□ -1.2
VPS45-203ENST00000419023 NOP2P46087 812 aaKnown RBP7.53□□□□□ -1.2
VPS45-203ENST00000419023 DUSP4Q13115 394 aa7.53□□□□□ -1.2
VPS45-203ENST00000419023 SLC15A2Q16348 729 aa7.53□□□□□ -1.2
VPS45-203ENST00000419023 DPY19L1Q2PZI1 675 aa7.53□□□□□ -1.2
VPS45-203ENST00000419023 RTP2Q5QGT7 225 aa7.53□□□□□ -1.2
VPS45-203ENST00000419023 TOM1L2Q6ZVM7 507 aa7.53□□□□□ -1.2
VPS45-203ENST00000419023 ATG4DQ86TL0 474 aaPredicted RBP7.53□□□□□ -1.2
VPS45-203ENST00000419023 BVESQ8NE79 360 aa7.53□□□□□ -1.2
VPS45-203ENST00000419023 FLAD1Q8NFF5 587 aa7.53□□□□□ -1.2
VPS45-203ENST00000419023 FCRL3Q96P31 734 aaPredicted RBP7.53□□□□□ -1.2
VPS45-203ENST00000419023 DNAJC2Q99543 621 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms