RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 CNPY2Q9Y2B0 182 aa12.16□□□□□ -0.46
RFC1-203ENST00000418436 CCDC196A0A1B0GTZ2 297 aa12.15□□□□□ -0.46
RFC1-203ENST00000418436 EDNRBP24530 442 aa12.15□□□□□ -0.46
RFC1-203ENST00000418436 CNGA1P29973 690 aa12.15□□□□□ -0.46
RFC1-203ENST00000418436 ADD1P35611 737 aaKnown RBP12.15□□□□□ -0.46
RFC1-203ENST00000418436 METAP2P50579 478 aaKnown RBP eCLIP12.15□□□□□ -0.46
RFC1-203ENST00000418436 ACVR2BQ13705 512 aa12.15□□□□□ -0.46
RFC1-203ENST00000418436 CCDC82Q8N4S0 544 aa12.15□□□□□ -0.46
RFC1-203ENST00000418436 PIBF1Q8WXW3 757 aa12.15□□□□□ -0.46
RFC1-203ENST00000418436 ZNF274Q96GC6 653 aaPredicted RBP12.15□□□□□ -0.46
RFC1-203ENST00000418436 COL20A1Q9P218 1284 aa12.15□□□□□ -0.46
RFC1-203ENST00000418436 SEC63Q9UGP8 760 aaKnown RBP12.15□□□□□ -0.46
RFC1-203ENST00000418436 CFBP00751 764 aa12.14□□□□□ -0.47
RFC1-203ENST00000418436 MLLT1Q03111 559 aaPredicted RBP12.14□□□□□ -0.47
RFC1-203ENST00000418436 NTRK3Q16288 839 aa12.14□□□□□ -0.47
RFC1-203ENST00000418436 TAAR1Q96RJ0 339 aa12.14□□□□□ -0.47
RFC1-203ENST00000418436 NAP1L2Q9ULW6 460 aaPredicted RBP12.14□□□□□ -0.47
RFC1-203ENST00000418436 DDX49Q9Y6V7 483 aaKnown RBP12.14□□□□□ -0.47
RFC1-203ENST00000418436 TNRC18O15417 2968 aaPredicted RBP12.14□□□□□ -0.47
RFC1-203ENST00000418436 KIAA1217Q5T5P2 1943 aa12.13□□□□□ -0.47
RFC1-203ENST00000418436 hCG_1642624A0A1W2PR95 340 aa12.13□□□□□ -0.47
RFC1-203ENST00000418436 AKR1A1P14550 325 aa12.13□□□□□ -0.47
RFC1-203ENST00000418436 TAPT1Q6NXT6 567 aa12.13□□□□□ -0.47
RFC1-203ENST00000418436 KCNV2Q8TDN2 545 aa12.13□□□□□ -0.47
RFC1-203ENST00000418436 NSUN6Q8TEA1 469 aaKnown RBP12.13□□□□□ -0.47
RFC1-203ENST00000418436 VTA1Q9NP79 307 aa12.13□□□□□ -0.47
RFC1-203ENST00000418436 ZHX1Q9UKY1 873 aaPredicted RBP12.13□□□□□ -0.47
RFC1-203ENST00000418436 FAM184BQ9ULE4 1060 aa12.13□□□□□ -0.47
RFC1-203ENST00000418436 V9GY48 417 aaPredicted RBP12.13□□□□□ -0.47
RFC1-203ENST00000418436 MKI67P46013 3256 aaKnown RBP12.12□□□□□ -0.47
RFC1-203ENST00000418436 RBM47A0AV96 593 aaKnown RBP12.12□□□□□ -0.47
RFC1-203ENST00000418436 B4DLN1 442 aa12.12□□□□□ -0.47
RFC1-203ENST00000418436 GCOM1H8Y6P7 765 aaPredicted RBP12.12□□□□□ -0.47
RFC1-203ENST00000418436 PIK3CDO00329 1044 aa12.12□□□□□ -0.47
RFC1-203ENST00000418436 ADCY6O43306 1168 aa12.12□□□□□ -0.47
RFC1-203ENST00000418436 PRPF3O43395 683 aaKnown RBP12.12□□□□□ -0.47
RFC1-203ENST00000418436 DUSP11O75319 330 aaKnown RBP12.12□□□□□ -0.47
RFC1-203ENST00000418436 FARP2O94887 1054 aaPredicted RBP12.12□□□□□ -0.47
RFC1-203ENST00000418436 POLR2MP0CAP2 368 aa12.12□□□□□ -0.47
RFC1-203ENST00000418436 RARBP10826 455 aa12.12□□□□□ -0.47
RFC1-203ENST00000418436 RBM25P49756 843 aaKnown RBP12.12□□□□□ -0.47
RFC1-203ENST00000418436 MRPL12P52815 198 aaKnown RBP12.12□□□□□ -0.47
RFC1-203ENST00000418436 CCT2P78371 535 aaKnown RBP12.12□□□□□ -0.47
RFC1-203ENST00000418436 ANKRD1Q15327 319 aa12.12□□□□□ -0.47
RFC1-203ENST00000418436 PROX2Q3B8N5 592 aa12.12□□□□□ -0.47
RFC1-203ENST00000418436 CCDC144BQ3MJ40 725 aa12.12□□□□□ -0.47
RFC1-203ENST00000418436 ANO1Q5XXA6 986 aa12.12□□□□□ -0.47
RFC1-203ENST00000418436 PAWRQ96IZ0 340 aaKnown RBP12.12□□□□□ -0.47
RFC1-203ENST00000418436 IWS1Q96ST2 819 aa12.12□□□□□ -0.47
RFC1-203ENST00000418436 RMDN3Q96TC7 470 aa12.12□□□□□ -0.47
RFC1-203ENST00000418436 MPHOSPH6Q99547 160 aaKnown RBP12.12□□□□□ -0.47
RFC1-203ENST00000418436 KIF2CQ99661 725 aa12.12□□□□□ -0.47
RFC1-203ENST00000418436 PXMP2Q9NR77 195 aa12.12□□□□□ -0.47
RFC1-203ENST00000418436 hCG_1984214I3L0E3 225 aa12.11□□□□□ -0.47
RFC1-203ENST00000418436 DNM1LO00429 736 aa12.11□□□□□ -0.47
RFC1-203ENST00000418436 MEIS2O14770 477 aa12.11□□□□□ -0.47
RFC1-203ENST00000418436 ADAMTS4O75173 837 aa12.11□□□□□ -0.47
RFC1-203ENST00000418436 COL6A1P12109 1028 aa12.11□□□□□ -0.47
RFC1-203ENST00000418436 IFNAR1P17181 557 aa12.11□□□□□ -0.47
RFC1-203ENST00000418436 HOXA13P31271 388 aaPredicted RBP12.11□□□□□ -0.47
RFC1-203ENST00000418436 AK2P54819 239 aa12.11□□□□□ -0.47
RFC1-203ENST00000418436 NKX3-2P78367 333 aa12.11□□□□□ -0.47
RFC1-203ENST00000418436 PDE4DQ08499 809 aa12.11□□□□□ -0.47
RFC1-203ENST00000418436 WWC2Q6AWC2 1192 aa12.11□□□□□ -0.47
RFC1-203ENST00000418436 IQSEC1Q6DN90 963 aa12.11□□□□□ -0.47
RFC1-203ENST00000418436 NECAB2Q7Z6G3 386 aa12.11□□□□□ -0.47
RFC1-203ENST00000418436 TEX2Q8IWB9 1127 aa12.11□□□□□ -0.47
RFC1-203ENST00000418436 FBXO16Q8IX29 292 aaPredicted RBP12.11□□□□□ -0.47
RFC1-203ENST00000418436 ZNF713Q8N859 430 aaPredicted RBP12.11□□□□□ -0.47
RFC1-203ENST00000418436 ARRDC4Q8NCT1 418 aa12.11□□□□□ -0.47
RFC1-203ENST00000418436 DIS3LQ8TF46 1054 aaKnown RBP12.11□□□□□ -0.47
RFC1-203ENST00000418436 RNF26Q9BY78 433 aaPredicted RBP12.11□□□□□ -0.47
RFC1-203ENST00000418436 C22orf23Q9BZE7 217 aa12.11□□□□□ -0.47
RFC1-203ENST00000418436 NCOA5Q9HCD5 579 aaKnown RBP12.11□□□□□ -0.47
RFC1-203ENST00000418436 PDGFCQ9NRA1 345 aa12.11□□□□□ -0.47
RFC1-203ENST00000418436 RBM27Q9P2N5 1060 aaKnown RBP12.11□□□□□ -0.47
RFC1-203ENST00000418436 RABGEF1Q9UJ41 708 aa12.11□□□□□ -0.47
RFC1-203ENST00000418436 TPCN1Q9ULQ1 816 aa12.11□□□□□ -0.47
RFC1-203ENST00000418436 ALPK3Q96L96 1907 aa12.11□□□□□ -0.47
RFC1-203ENST00000418436 FRMPD4Q14CM0 1322 aa12.11□□□□□ -0.47
RFC1-203ENST00000418436 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.1□□□□□ -0.47
RFC1-203ENST00000418436 MAP3K7O43318 606 aa12.1□□□□□ -0.47
RFC1-203ENST00000418436 PFKFB2O60825 505 aa12.1□□□□□ -0.47
RFC1-203ENST00000418436 NR3C2P08235 984 aa12.1□□□□□ -0.47
RFC1-203ENST00000418436 ADCYAP1R1P41586 468 aa12.1□□□□□ -0.47
RFC1-203ENST00000418436 NEK4P51957 841 aa12.1□□□□□ -0.47
RFC1-203ENST00000418436 TNFAIP2Q03169 654 aa12.1□□□□□ -0.47
RFC1-203ENST00000418436 LRRC41Q15345 812 aa12.1□□□□□ -0.47
RFC1-203ENST00000418436 PKN1Q16512 942 aa12.1□□□□□ -0.47
RFC1-203ENST00000418436 PFKFB3Q16875 520 aaPredicted RBP12.1□□□□□ -0.47
RFC1-203ENST00000418436 ARHGEF16Q5VV41 709 aa12.1□□□□□ -0.47
RFC1-203ENST00000418436 PPP1R18Q6NYC8 613 aa12.1□□□□□ -0.47
RFC1-203ENST00000418436 USP17L6PQ6QN14 398 aa12.1□□□□□ -0.47
RFC1-203ENST00000418436 EEPD1Q7L9B9 569 aa12.1□□□□□ -0.47
RFC1-203ENST00000418436 HEATR3Q7Z4Q2 680 aa12.1□□□□□ -0.47
RFC1-203ENST00000418436 VSIG10LQ86VR7 867 aa12.1□□□□□ -0.47
RFC1-203ENST00000418436 KLHDC9Q8NEP7 349 aa12.1□□□□□ -0.47
RFC1-203ENST00000418436 GPKOWQ92917 476 aaPredicted RBP eCLIP12.1□□□□□ -0.47
RFC1-203ENST00000418436 LENG1Q96BZ8 264 aaPredicted RBP12.1□□□□□ -0.47
RFC1-203ENST00000418436 KCTD12Q96CX2 325 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms