RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 A0A1W2PPC1 479 aa23.8■■□□□ 1.4
PKNOX1-202ENST00000418336 KIAA0355O15063 1070 aa23.8■■□□□ 1.4
PKNOX1-202ENST00000418336 CD4P01730 458 aa23.8■■□□□ 1.4
PKNOX1-202ENST00000418336 ADD1P35611 737 aaKnown RBP23.8■■□□□ 1.4
PKNOX1-202ENST00000418336 TTLL4Q14679 1199 aa23.8■■□□□ 1.4
PKNOX1-202ENST00000418336 SEPT14Q6ZU15 432 aa23.8■■□□□ 1.4
PKNOX1-202ENST00000418336 RUFY3Q7L099 469 aa23.8■■□□□ 1.4
PKNOX1-202ENST00000418336 FAM126BQ8IXS8 530 aa23.8■■□□□ 1.4
PKNOX1-202ENST00000418336 OR6J1Q8NGC5 347 aa23.8■■□□□ 1.4
PKNOX1-202ENST00000418336 GPKOWQ92917 476 aaPredicted RBP eCLIP23.8■■□□□ 1.4
PKNOX1-202ENST00000418336 IL17RAQ96F46 866 aa23.8■■□□□ 1.4
PKNOX1-202ENST00000418336 TM6SF1Q9BZW5 370 aa23.8■■□□□ 1.4
PKNOX1-202ENST00000418336 SEC63Q9UGP8 760 aaKnown RBP23.8■■□□□ 1.4
PKNOX1-202ENST00000418336 TBX21Q9UL17 535 aa23.8■■□□□ 1.4
PKNOX1-202ENST00000418336 GOLGA8AA7E2F4 631 aa23.79■■□□□ 1.4
PKNOX1-202ENST00000418336 GOLGA8BA8MQT2 603 aa23.79■■□□□ 1.4
PKNOX1-202ENST00000418336 PQBP1O60828 265 aaKnown RBP23.79■■□□□ 1.4
PKNOX1-202ENST00000418336 CABYRO75952 493 aa23.79■■□□□ 1.4
PKNOX1-202ENST00000418336 CLTBP09497 229 aa23.79■■□□□ 1.4
PKNOX1-202ENST00000418336 MDM2Q00987 491 aaPredicted RBP23.79■■□□□ 1.4
PKNOX1-202ENST00000418336 SYNE3Q6ZMZ3 975 aa23.79■■□□□ 1.4
PKNOX1-202ENST00000418336 FCHSD1Q86WN1 690 aa23.79■■□□□ 1.4
PKNOX1-202ENST00000418336 ZFP91Q96JP5 570 aaPredicted RBP23.79■■□□□ 1.4
PKNOX1-202ENST00000418336 PSMA5P28066 241 aa23.78■■□□□ 1.4
PKNOX1-202ENST00000418336 PSMC6P62333 389 aa23.78■■□□□ 1.4
PKNOX1-202ENST00000418336 SP2Q02086 613 aa23.78■■□□□ 1.4
PKNOX1-202ENST00000418336 SEMA3FQ13275 785 aa23.78■■□□□ 1.4
PKNOX1-202ENST00000418336 NTRK3Q16288 839 aa23.78■■□□□ 1.4
PKNOX1-202ENST00000418336 EMID1Q96A84 441 aaPredicted RBP23.78■■□□□ 1.4
PKNOX1-202ENST00000418336 CPT1AP50416 773 aa23.77■■□□□ 1.4
PKNOX1-202ENST00000418336 ITGA7Q13683 1181 aa23.77■■□□□ 1.4
PKNOX1-202ENST00000418336 INPP4AQ96PE3 977 aaPredicted RBP23.77■■□□□ 1.4
PKNOX1-202ENST00000418336 V9GY48 417 aaPredicted RBP23.77■■□□□ 1.4
PKNOX1-202ENST00000418336 LAMA2P24043 3122 aaKnown RBP23.77■■□□□ 1.4
PKNOX1-202ENST00000418336 STXBP3O00186 592 aa23.76■■□□□ 1.39
PKNOX1-202ENST00000418336 SOX1O00570 391 aaPredicted RBP23.76■■□□□ 1.39
PKNOX1-202ENST00000418336 ZEB2O60315 1214 aa23.76■■□□□ 1.39
PKNOX1-202ENST00000418336 SEC24BO95487 1268 aa23.76■■□□□ 1.39
PKNOX1-202ENST00000418336 MYCLP12524 364 aaPredicted RBP23.76■■□□□ 1.39
PKNOX1-202ENST00000418336 PDIA3P30101 505 aaKnown RBP23.76■■□□□ 1.39
PKNOX1-202ENST00000418336 METAP2P50579 478 aaKnown RBP eCLIP23.76■■□□□ 1.39
PKNOX1-202ENST00000418336 PKN1Q16512 942 aa23.76■■□□□ 1.39
PKNOX1-202ENST00000418336 BCAS3Q9H6U6 928 aa23.76■■□□□ 1.39
PKNOX1-202ENST00000418336 PSTPIP2Q9H939 334 aa23.76■■□□□ 1.39
PKNOX1-202ENST00000418336 PRDM5Q9NQX1 630 aaPredicted RBP23.76■■□□□ 1.39
PKNOX1-202ENST00000418336 GH1P01241 217 aa23.75■■□□□ 1.39
PKNOX1-202ENST00000418336 MMP3P08254 477 aa23.75■■□□□ 1.39
PKNOX1-202ENST00000418336 HOXD8P13378 290 aaPredicted RBP23.75■■□□□ 1.39
PKNOX1-202ENST00000418336 ICAM3P32942 547 aa23.75■■□□□ 1.39
PKNOX1-202ENST00000418336 UBE2SQ16763 222 aa23.75■■□□□ 1.39
PKNOX1-202ENST00000418336 HEATR3Q7Z4Q2 680 aa23.75■■□□□ 1.39
PKNOX1-202ENST00000418336 AFG1LQ8WV93 481 aa23.75■■□□□ 1.39
PKNOX1-202ENST00000418336 KAT2BQ92831 832 aa23.75■■□□□ 1.39
PKNOX1-202ENST00000418336 BADQ92934 168 aa23.75■■□□□ 1.39
PKNOX1-202ENST00000418336 UPF3BQ9BZI7 483 aaKnown RBP23.75■■□□□ 1.39
PKNOX1-202ENST00000418336 POLR3EQ9NVU0 708 aa23.75■■□□□ 1.39
PKNOX1-202ENST00000418336 ADAMTS3O15072 1205 aa23.74■■□□□ 1.39
PKNOX1-202ENST00000418336 UBA1P22314 1058 aaKnown RBP23.74■■□□□ 1.39
PKNOX1-202ENST00000418336 CCND2P30279 289 aa23.74■■□□□ 1.39
PKNOX1-202ENST00000418336 PCNX4Q63HM2 1172 aa23.74■■□□□ 1.39
PKNOX1-202ENST00000418336 BARHL2Q9NY43 387 aa23.74■■□□□ 1.39
PKNOX1-202ENST00000418336 MROH7Q68CQ1 1323 aa23.74■■□□□ 1.39
PKNOX1-202ENST00000418336 MYH7BA7E2Y1 1941 aa23.73■■□□□ 1.39
PKNOX1-202ENST00000418336 DCDC2CA8MYV0 355 aa23.73■■□□□ 1.39
PKNOX1-202ENST00000418336 MYL3P08590 195 aa23.73■■□□□ 1.39
PKNOX1-202ENST00000418336 CLK2P49760 499 aaKnown RBP23.73■■□□□ 1.39
PKNOX1-202ENST00000418336 EPHB4P54760 987 aa23.73■■□□□ 1.39
PKNOX1-202ENST00000418336 MYSM1Q5VVJ2 828 aa23.73■■□□□ 1.39
PKNOX1-202ENST00000418336 PPP1R18Q6NYC8 613 aa23.73■■□□□ 1.39
PKNOX1-202ENST00000418336 TDHQ8IZJ6 230 aa23.73■■□□□ 1.39
PKNOX1-202ENST00000418336 SMARCC2Q8TAQ2 1214 aa23.73■■□□□ 1.39
PKNOX1-202ENST00000418336 MTG1Q9BT17 334 aaPredicted RBP23.73■■□□□ 1.39
PKNOX1-202ENST00000418336 UBE2OQ9C0C9 1292 aaKnown RBP23.73■■□□□ 1.39
PKNOX1-202ENST00000418336 MRVI1Q9Y6F6 885 aa23.73■■□□□ 1.39
PKNOX1-202ENST00000418336 SPATA31C2B4DYI2 1134 aa23.72■■□□□ 1.39
PKNOX1-202ENST00000418336 B4GALT4O60513 344 aa23.72■■□□□ 1.39
PKNOX1-202ENST00000418336 PFKFB3Q16875 520 aaPredicted RBP23.72■■□□□ 1.39
PKNOX1-202ENST00000418336 CELF3Q5SZQ8 465 aaKnown RBP23.72■■□□□ 1.39
PKNOX1-202ENST00000418336 PPTC7Q8NI37 304 aa23.72■■□□□ 1.39
PKNOX1-202ENST00000418336 SEZ6LQ9BYH1 1024 aa23.72■■□□□ 1.39
PKNOX1-202ENST00000418336 RIC8AQ9NPQ8 531 aa23.72■■□□□ 1.39
PKNOX1-202ENST00000418336 TMEM39AQ9NV64 488 aa23.72■■□□□ 1.39
PKNOX1-202ENST00000418336 PRKAG2Q9UGJ0 569 aa23.72■■□□□ 1.39
PKNOX1-202ENST00000418336 CYP46A1Q9Y6A2 500 aa23.72■■□□□ 1.39
PKNOX1-202ENST00000418336 hCG_1984214I3L0E3 225 aa23.71■■□□□ 1.39
PKNOX1-202ENST00000418336 PRPF3O43395 683 aaKnown RBP23.71■■□□□ 1.39
PKNOX1-202ENST00000418336 STAM2O75886 525 aa23.71■■□□□ 1.39
PKNOX1-202ENST00000418336 TGFB3P10600 412 aa23.71■■□□□ 1.39
PKNOX1-202ENST00000418336 HSDL1Q3SXM5 330 aa23.71■■□□□ 1.39
PKNOX1-202ENST00000418336 XRRA1Q6P2D8 792 aa23.71■■□□□ 1.39
PKNOX1-202ENST00000418336 ZNF713Q8N859 430 aaPredicted RBP23.71■■□□□ 1.39
PKNOX1-202ENST00000418336 PPP1R13LQ8WUF5 828 aa23.71■■□□□ 1.39
PKNOX1-202ENST00000418336 VTI1AQ96AJ9 217 aa23.71■■□□□ 1.39
PKNOX1-202ENST00000418336 CTAGE1Q96RT6 745 aa23.71■■□□□ 1.39
PKNOX1-202ENST00000418336 TRPV6Q9H1D0 765 aa23.71■■□□□ 1.39
PKNOX1-202ENST00000418336 ALDH8A1Q9H2A2 487 aaPredicted RBP23.71■■□□□ 1.39
PKNOX1-202ENST00000418336 NCOA5Q9HCD5 579 aaKnown RBP23.71■■□□□ 1.39
PKNOX1-202ENST00000418336 TELO2Q9Y4R8 837 aa23.71■■□□□ 1.39
PKNOX1-202ENST00000418336 KPNA6O60684 536 aa23.7■■□□□ 1.38
PKNOX1-202ENST00000418336 TIMP1P01033 207 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms