RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 USP17L11C9JVI0 530 aa13.2□□□□□ -0.3
LIMK1-202ENST00000418310 USP17L18D6R9N7 530 aa13.2□□□□□ -0.3
LIMK1-202ENST00000418310 USP17L22D6RA61 530 aa13.2□□□□□ -0.3
LIMK1-202ENST00000418310 USP17L17D6RBQ6 530 aa13.2□□□□□ -0.3
LIMK1-202ENST00000418310 USP17L19D6RCP7 530 aa13.2□□□□□ -0.3
LIMK1-202ENST00000418310 USP17L20D6RJB6 530 aa13.2□□□□□ -0.3
LIMK1-202ENST00000418310 USO1O60763 962 aaKnown RBP13.2□□□□□ -0.3
LIMK1-202ENST00000418310 SLC1A4P43007 532 aa13.2□□□□□ -0.3
LIMK1-202ENST00000418310 USP17L24Q0WX57 530 aa13.2□□□□□ -0.3
LIMK1-202ENST00000418310 TUBB2AQ13885 445 aa13.2□□□□□ -0.3
LIMK1-202ENST00000418310 MEA1Q16626 185 aa13.2□□□□□ -0.3
LIMK1-202ENST00000418310 USP17L6PQ6QN14 398 aa13.2□□□□□ -0.3
LIMK1-202ENST00000418310 TUBB2BQ9BVA1 445 aa13.2□□□□□ -0.3
LIMK1-202ENST00000418310 MYH10P35580 1976 aa13.2□□□□□ -0.3
LIMK1-202ENST00000418310 COL16A1Q07092 1604 aaPredicted RBP13.2□□□□□ -0.3
LIMK1-202ENST00000418310 EIF3CLB5ME19 914 aaKnown RBP13.2□□□□□ -0.3
LIMK1-202ENST00000418310 TACC1O75410 805 aa13.2□□□□□ -0.3
LIMK1-202ENST00000418310 FTCDO95954 541 aa13.2□□□□□ -0.3
LIMK1-202ENST00000418310 STAT3P40763 770 aa13.2□□□□□ -0.3
LIMK1-202ENST00000418310 DAGLBQ8NCG7 672 aa13.2□□□□□ -0.3
LIMK1-202ENST00000418310 NEDD1Q8NHV4 660 aa13.2□□□□□ -0.3
LIMK1-202ENST00000418310 EIF3CQ99613 913 aaKnown RBP13.2□□□□□ -0.3
LIMK1-202ENST00000418310 C7orf25Q9BPX7 421 aa13.2□□□□□ -0.3
LIMK1-202ENST00000418310 SPZ1Q9BXG8 430 aa13.2□□□□□ -0.3
LIMK1-202ENST00000418310 EHD4Q9H223 541 aa13.2□□□□□ -0.3
LIMK1-202ENST00000418310 GOLPH3Q9H4A6 298 aa13.2□□□□□ -0.3
LIMK1-202ENST00000418310 ZNF287Q9HBT7 754 aa13.2□□□□□ -0.3
LIMK1-202ENST00000418310 ZSCAN5CA6NGD5 496 aaPredicted RBP13.19□□□□□ -0.3
LIMK1-202ENST00000418310 KRT18P05783 430 aaKnown RBP13.19□□□□□ -0.3
LIMK1-202ENST00000418310 TCP10Q12799 353 aa13.19□□□□□ -0.3
LIMK1-202ENST00000418310 DOK7Q18PE1 504 aa13.19□□□□□ -0.3
LIMK1-202ENST00000418310 C16orf86Q6ZW13 317 aa13.19□□□□□ -0.3
LIMK1-202ENST00000418310 NUP58Q9BVL2 599 aa13.19□□□□□ -0.3
LIMK1-202ENST00000418310 ACBD3Q9H3P7 528 aa13.19□□□□□ -0.3
LIMK1-202ENST00000418310 GGA1Q9UJY5 639 aa13.19□□□□□ -0.3
LIMK1-202ENST00000418310 SCN7AQ01118 1682 aa13.19□□□□□ -0.3
LIMK1-202ENST00000418310 PRPHP41219 470 aa13.19□□□□□ -0.3
LIMK1-202ENST00000418310 POLR2FP61218 127 aaKnown RBP13.19□□□□□ -0.3
LIMK1-202ENST00000418310 CKAP4Q07065 602 aaKnown RBP13.19□□□□□ -0.3
LIMK1-202ENST00000418310 RAPGEF1Q13905 1077 aa13.19□□□□□ -0.3
LIMK1-202ENST00000418310 PAPD7Q5XG87 772 aaKnown RBP13.19□□□□□ -0.3
LIMK1-202ENST00000418310 SLC30A10Q6XR72 485 aa13.19□□□□□ -0.3
LIMK1-202ENST00000418310 AK8Q96MA6 479 aa13.19□□□□□ -0.3
LIMK1-202ENST00000418310 HPCAL4Q9UM19 191 aa13.19□□□□□ -0.3
LIMK1-202ENST00000418310 SNED1Q8TER0 1413 aa13.19□□□□□ -0.3
LIMK1-202ENST00000418310 USP17L10C9JJH3 530 aa13.18□□□□□ -0.3
LIMK1-202ENST00000418310 MEIS1O00470 390 aa13.18□□□□□ -0.3
LIMK1-202ENST00000418310 LAD1O00515 517 aa13.18□□□□□ -0.3
LIMK1-202ENST00000418310 GALNT17Q6IS24 598 aa13.18□□□□□ -0.3
LIMK1-202ENST00000418310 EHBP1Q8NDI1 1231 aa13.18□□□□□ -0.3
LIMK1-202ENST00000418310 NOC3LQ8WTT2 800 aaKnown RBP13.18□□□□□ -0.3
LIMK1-202ENST00000418310 CNTNAP4Q9C0A0 1308 aa13.18□□□□□ -0.3
LIMK1-202ENST00000418310 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.18□□□□□ -0.3
LIMK1-202ENST00000418310 POTEB3A0JP26 581 aa13.18□□□□□ -0.3
LIMK1-202ENST00000418310 POTECB2RU33 542 aa13.18□□□□□ -0.3
LIMK1-202ENST00000418310 SYF2O95926 243 aaKnown RBP13.18□□□□□ -0.3
LIMK1-202ENST00000418310 PRR5LQ6MZQ0 368 aa13.18□□□□□ -0.3
LIMK1-202ENST00000418310 POTEBQ6S5H4 581 aa13.18□□□□□ -0.3
LIMK1-202ENST00000418310 FAM71BQ8TC56 605 aa13.18□□□□□ -0.3
LIMK1-202ENST00000418310 AFAP1L1Q8TED9 768 aa13.18□□□□□ -0.3
LIMK1-202ENST00000418310 IFT81Q8WYA0 676 aa13.18□□□□□ -0.3
LIMK1-202ENST00000418310 MTMR8Q96EF0 704 aa13.18□□□□□ -0.3
LIMK1-202ENST00000418310 LSM14BQ9BX40 385 aaKnown RBP13.18□□□□□ -0.3
LIMK1-202ENST00000418310 DDX4Q9NQI0 724 aaKnown RBP13.18□□□□□ -0.3
LIMK1-202ENST00000418310 ZNF219Q9P2Y4 722 aaPredicted RBP13.18□□□□□ -0.3
LIMK1-202ENST00000418310 POLLQ9UGP5 575 aa13.18□□□□□ -0.3
LIMK1-202ENST00000418310 KIAA1024Q9UPX6 916 aa13.18□□□□□ -0.3
LIMK1-202ENST00000418310 LEMD3Q9Y2U8 911 aa13.18□□□□□ -0.3
LIMK1-202ENST00000418310 RHBDL3P58872 404 aa13.18□□□□□ -0.3
LIMK1-202ENST00000418310 MAP9Q49MG5 647 aa13.18□□□□□ -0.3
LIMK1-202ENST00000418310 UNC13DQ70J99 1090 aa13.18□□□□□ -0.3
LIMK1-202ENST00000418310 GOLGA5Q8TBA6 731 aa13.18□□□□□ -0.3
LIMK1-202ENST00000418310 DDX25Q9UHL0 483 aaKnown RBP13.18□□□□□ -0.3
LIMK1-202ENST00000418310 CASZ1Q86V15 1759 aa13.17□□□□□ -0.3
LIMK1-202ENST00000418310 MYO1CO00159 1063 aa13.17□□□□□ -0.3
LIMK1-202ENST00000418310 IKQ13123 557 aaPredicted RBP13.17□□□□□ -0.3
LIMK1-202ENST00000418310 MAN2A1Q16706 1144 aa13.17□□□□□ -0.3
LIMK1-202ENST00000418310 HERC4Q5GLZ8 1057 aaPredicted RBP13.17□□□□□ -0.3
LIMK1-202ENST00000418310 CENPPQ6IPU0 288 aa13.17□□□□□ -0.3
LIMK1-202ENST00000418310 BBXQ8WY36 941 aaPredicted RBP13.17□□□□□ -0.3
LIMK1-202ENST00000418310 ANKS1AQ92625 1134 aa13.17□□□□□ -0.3
LIMK1-202ENST00000418310 SH2D4AQ9H788 454 aa13.17□□□□□ -0.3
LIMK1-202ENST00000418310 SNX12Q9UMY4 172 aa13.17□□□□□ -0.3
LIMK1-202ENST00000418310 PPP1R11O60927 126 aaPredicted RBP13.17□□□□□ -0.3
LIMK1-202ENST00000418310 EPS15P42566 896 aa13.17□□□□□ -0.3
LIMK1-202ENST00000418310 KCTD16Q68DU8 428 aa13.17□□□□□ -0.3
LIMK1-202ENST00000418310 WDR93Q6P2C0 686 aa13.17□□□□□ -0.3
LIMK1-202ENST00000418310 CCDC170Q8IYT3 715 aa13.17□□□□□ -0.3
LIMK1-202ENST00000418310 ADGRF4Q8IZF3 695 aa13.17□□□□□ -0.3
LIMK1-202ENST00000418310 RAD54LQ92698 747 aa13.17□□□□□ -0.3
LIMK1-202ENST00000418310 OSBPL9Q96SU4 736 aa13.17□□□□□ -0.3
LIMK1-202ENST00000418310 BCAS3Q9H6U6 928 aa13.17□□□□□ -0.3
LIMK1-202ENST00000418310 CWC15Q9P013 229 aaKnown RBP13.17□□□□□ -0.3
LIMK1-202ENST00000418310 SIK3Q9Y2K2 1263 aa13.17□□□□□ -0.3
LIMK1-202ENST00000418310 EDIL3O43854 480 aa13.17□□□□□ -0.3
LIMK1-202ENST00000418310 PPP4CP60510 307 aa13.17□□□□□ -0.3
LIMK1-202ENST00000418310 COASYQ13057 564 aa13.17□□□□□ -0.3
LIMK1-202ENST00000418310 CREG2Q8IUH2 290 aa13.17□□□□□ -0.3
LIMK1-202ENST00000418310 SPATA4Q8NEY3 305 aa13.17□□□□□ -0.3
LIMK1-202ENST00000418310 ERGIC2Q96RQ1 377 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms