RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 FBXL6Q8N531 539 aa6.78□□□□□ -1.32
ECHDC1-206ENST00000417628 SLC44A5Q8NCS7 719 aa6.78□□□□□ -1.32
ECHDC1-206ENST00000417628 GLIS3Q8NEA6 775 aa6.78□□□□□ -1.32
ECHDC1-206ENST00000417628 RTF1Q92541 710 aaKnown RBP6.78□□□□□ -1.32
ECHDC1-206ENST00000417628 NKD2Q969F2 451 aaPredicted RBP6.78□□□□□ -1.32
ECHDC1-206ENST00000417628 SLC30A3Q99726 388 aa6.78□□□□□ -1.32
ECHDC1-206ENST00000417628 TGIF2Q9GZN2 237 aa6.78□□□□□ -1.32
ECHDC1-206ENST00000417628 FAM8A1Q9UBU6 413 aa6.78□□□□□ -1.32
ECHDC1-206ENST00000417628 AGTPBP1Q9UPW5 1226 aa6.78□□□□□ -1.32
ECHDC1-206ENST00000417628 PCDHA11Q9Y5I1 949 aa6.78□□□□□ -1.32
ECHDC1-206ENST00000417628 CHD9Q3L8U1 2897 aa6.77□□□□□ -1.33
ECHDC1-206ENST00000417628 CHD6Q8TD26 2715 aa6.77□□□□□ -1.33
ECHDC1-206ENST00000417628 H7C1W4 665 aa6.77□□□□□ -1.33
ECHDC1-206ENST00000417628 TIMP1P01033 207 aa6.77□□□□□ -1.33
ECHDC1-206ENST00000417628 TPM2P07951 284 aa6.77□□□□□ -1.33
ECHDC1-206ENST00000417628 RARAP10276 462 aa6.77□□□□□ -1.33
ECHDC1-206ENST00000417628 NFKB1P19838 968 aa6.77□□□□□ -1.33
ECHDC1-206ENST00000417628 KCNA5P22460 613 aa6.77□□□□□ -1.33
ECHDC1-206ENST00000417628 KLRK1P26718 216 aa6.77□□□□□ -1.33
ECHDC1-206ENST00000417628 ADCYAP1R1P41586 468 aa6.77□□□□□ -1.33
ECHDC1-206ENST00000417628 RABGGTBP53611 331 aa6.77□□□□□ -1.33
ECHDC1-206ENST00000417628 MFSD14CQ5VZR4 134 aa6.77□□□□□ -1.33
ECHDC1-206ENST00000417628 MFSD5Q6N075 450 aa6.77□□□□□ -1.33
ECHDC1-206ENST00000417628 Q6ZNB5 142 aa6.77□□□□□ -1.33
ECHDC1-206ENST00000417628 ZNF365Q70YC5 407 aa6.77□□□□□ -1.33
ECHDC1-206ENST00000417628 C16orf59Q7L2K0 433 aa6.77□□□□□ -1.33
ECHDC1-206ENST00000417628 DZIP1LQ8IYY4 767 aaKnown RBP6.77□□□□□ -1.33
ECHDC1-206ENST00000417628 EDAQ92838 391 aa6.77□□□□□ -1.33
ECHDC1-206ENST00000417628 ZNF837Q96EG3 531 aaPredicted RBP6.77□□□□□ -1.33
ECHDC1-206ENST00000417628 ABHD17AQ96GS6 310 aa6.77□□□□□ -1.33
ECHDC1-206ENST00000417628 IPO9Q96P70 1041 aaKnown RBP6.77□□□□□ -1.33
ECHDC1-206ENST00000417628 SIN3AQ96ST3 1273 aa6.77□□□□□ -1.33
ECHDC1-206ENST00000417628 SRCIN1Q9C0H9 1055 aa6.77□□□□□ -1.33
ECHDC1-206ENST00000417628 MARK1Q9P0L2 795 aa6.77□□□□□ -1.33
ECHDC1-206ENST00000417628 PRKAG3Q9UGI9 489 aa6.77□□□□□ -1.33
ECHDC1-206ENST00000417628 MUTYHQ9UIF7 546 aa6.77□□□□□ -1.33
ECHDC1-206ENST00000417628 LEMD3Q9Y2U8 911 aa6.77□□□□□ -1.33
ECHDC1-206ENST00000417628 CFAP47Q6ZTR5 3102 aa6.77□□□□□ -1.33
ECHDC1-206ENST00000417628 REV3LO60673 3130 aa6.76□□□□□ -1.33
ECHDC1-206ENST00000417628 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.76□□□□□ -1.33
ECHDC1-206ENST00000417628 EPOPA6NHQ4 379 aa6.76□□□□□ -1.33
ECHDC1-206ENST00000417628 DIAPH1O60610 1272 aaKnown RBP6.76□□□□□ -1.33
ECHDC1-206ENST00000417628 MAP3K6O95382 1288 aa6.76□□□□□ -1.33
ECHDC1-206ENST00000417628 MYOGP15173 224 aa6.76□□□□□ -1.33
ECHDC1-206ENST00000417628 CD33P20138 364 aa6.76□□□□□ -1.33
ECHDC1-206ENST00000417628 VCPP55072 806 aaKnown RBP6.76□□□□□ -1.33
ECHDC1-206ENST00000417628 SPEM2Q0P670 501 aa6.76□□□□□ -1.33
ECHDC1-206ENST00000417628 TAF3Q5VWG9 929 aa6.76□□□□□ -1.33
ECHDC1-206ENST00000417628 MIGA2Q7L4E1 593 aa6.76□□□□□ -1.33
ECHDC1-206ENST00000417628 TICAM2Q86XR7 235 aa6.76□□□□□ -1.33
ECHDC1-206ENST00000417628 SREK1Q8WXA9 508 aaKnown RBP6.76□□□□□ -1.33
ECHDC1-206ENST00000417628 FERMT2Q96AC1 680 aa6.76□□□□□ -1.33
ECHDC1-206ENST00000417628 CHAMP1Q96JM3 812 aa6.76□□□□□ -1.33
ECHDC1-206ENST00000417628 TINF2Q9BSI4 451 aa6.76□□□□□ -1.33
ECHDC1-206ENST00000417628 ACBD3Q9H3P7 528 aa6.76□□□□□ -1.33
ECHDC1-206ENST00000417628 CD209Q9NNX6 404 aa6.76□□□□□ -1.33
ECHDC1-206ENST00000417628 TLR7Q9NYK1 1049 aaKnown RBP6.76□□□□□ -1.33
ECHDC1-206ENST00000417628 ZNF112Q9UJU3 913 aa6.76□□□□□ -1.33
ECHDC1-206ENST00000417628 MINPP1Q9UNW1 487 aa6.76□□□□□ -1.33
ECHDC1-206ENST00000417628 FAM50BQ9Y247 325 aa6.76□□□□□ -1.33
ECHDC1-206ENST00000417628 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.76□□□□□ -1.33
ECHDC1-206ENST00000417628 UNC79Q9P2D8 2635 aa6.76□□□□□ -1.33
ECHDC1-206ENST00000417628 NCOR2Q9Y618 2525 aa6.76□□□□□ -1.33
ECHDC1-206ENST00000417628 KIF4AO95239 1232 aa6.75□□□□□ -1.33
ECHDC1-206ENST00000417628 PTMAP06454 111 aaKnown RBP6.75□□□□□ -1.33
ECHDC1-206ENST00000417628 ACRP10323 421 aa6.75□□□□□ -1.33
ECHDC1-206ENST00000417628 HOXD8P13378 290 aaPredicted RBP6.75□□□□□ -1.33
ECHDC1-206ENST00000417628 EDN3P14138 238 aa6.75□□□□□ -1.33
ECHDC1-206ENST00000417628 ACPPP15309 386 aa6.75□□□□□ -1.33
ECHDC1-206ENST00000417628 CSF2RAP15509 400 aa6.75□□□□□ -1.33
ECHDC1-206ENST00000417628 ITGA6P23229 1130 aa6.75□□□□□ -1.33
ECHDC1-206ENST00000417628 CACNB3P54284 484 aa6.75□□□□□ -1.33
ECHDC1-206ENST00000417628 RACK1P63244 317 aaKnown RBP6.75□□□□□ -1.33
ECHDC1-206ENST00000417628 AIMP1Q12904 312 aaKnown RBP6.75□□□□□ -1.33
ECHDC1-206ENST00000417628 TAF7Q15545 349 aaPredicted RBP6.75□□□□□ -1.33
ECHDC1-206ENST00000417628 PROSER3Q2NL68 480 aa6.75□□□□□ -1.33
ECHDC1-206ENST00000417628 ZNF394Q53GI3 561 aa6.75□□□□□ -1.33
ECHDC1-206ENST00000417628 RAB44Q7Z6P3 723 aaPredicted RBP6.75□□□□□ -1.33
ECHDC1-206ENST00000417628 FAM83AQ86UY5 434 aa6.75□□□□□ -1.33
ECHDC1-206ENST00000417628 ADHFE1Q8IWW8 467 aa6.75□□□□□ -1.33
ECHDC1-206ENST00000417628 TMEM199Q8N511 208 aa6.75□□□□□ -1.33
ECHDC1-206ENST00000417628 C3orf58Q8NDZ4 430 aa6.75□□□□□ -1.33
ECHDC1-206ENST00000417628 XAGE3Q8WTP9 111 aa6.75□□□□□ -1.33
ECHDC1-206ENST00000417628 USP6NLQ92738 828 aa6.75□□□□□ -1.33
ECHDC1-206ENST00000417628 GTPBP3Q969Y2 492 aaKnown RBP6.75□□□□□ -1.33
ECHDC1-206ENST00000417628 DRC1Q96MC2 740 aa6.75□□□□□ -1.33
ECHDC1-206ENST00000417628 CDC5LQ99459 802 aaKnown RBP6.75□□□□□ -1.33
ECHDC1-206ENST00000417628 CERS4Q9HA82 394 aa6.75□□□□□ -1.33
ECHDC1-206ENST00000417628 SENP2Q9HC62 589 aa6.75□□□□□ -1.33
ECHDC1-206ENST00000417628 SRA1Q9HD15 236 aaKnown RBP6.75□□□□□ -1.33
ECHDC1-206ENST00000417628 TMOD2Q9NZR1 351 aa6.75□□□□□ -1.33
ECHDC1-206ENST00000417628 DDX41Q9UJV9 622 aaKnown RBP6.75□□□□□ -1.33
ECHDC1-206ENST00000417628 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.75□□□□□ -1.33
ECHDC1-206ENST00000417628 ZHX2Q9Y6X8 837 aa6.75□□□□□ -1.33
ECHDC1-206ENST00000417628 DOCK3Q8IZD9 2030 aa6.75□□□□□ -1.33
ECHDC1-206ENST00000417628 GBF1Q92538 1859 aa6.75□□□□□ -1.33
ECHDC1-206ENST00000417628 PHF20L1A8MW92 1017 aa6.74□□□□□ -1.33
ECHDC1-206ENST00000417628 DCDC2CA8MYV0 355 aa6.74□□□□□ -1.33
ECHDC1-206ENST00000417628 CA3P07451 260 aa6.74□□□□□ -1.33
ECHDC1-206ENST00000417628 SNRPBP14678 240 aaKnown RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms