RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 PPP2R3BQ9Y5P8 575 aa11.99□□□□□ -0.49
SMPD4P1-201ENST00000416717 SSBP05455 408 aaKnown RBP eCLIP11.98□□□□□ -0.49
SMPD4P1-201ENST00000416717 CDK11BP21127 795 aaKnown RBP11.98□□□□□ -0.49
SMPD4P1-201ENST00000416717 MCTP2Q6DN12 878 aa11.98□□□□□ -0.49
SMPD4P1-201ENST00000416717 NCAPH2Q6IBW4 605 aa11.98□□□□□ -0.49
SMPD4P1-201ENST00000416717 DPY19L2Q6NUT2 758 aa11.98□□□□□ -0.49
SMPD4P1-201ENST00000416717 DYMQ7RTS9 669 aa11.98□□□□□ -0.49
SMPD4P1-201ENST00000416717 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.98□□□□□ -0.49
SMPD4P1-201ENST00000416717 ETNPPLQ8TBG4 499 aa11.98□□□□□ -0.49
SMPD4P1-201ENST00000416717 MRFAP1L1Q96HT8 127 aa11.98□□□□□ -0.49
SMPD4P1-201ENST00000416717 SLC38A10Q9HBR0 1119 aa11.98□□□□□ -0.49
SMPD4P1-201ENST00000416717 OTOFQ9HC10 1997 aa11.98□□□□□ -0.49
SMPD4P1-201ENST00000416717 RLFQ13129 1914 aa11.98□□□□□ -0.49
SMPD4P1-201ENST00000416717 SYNRGQ9UMZ2 1314 aa11.98□□□□□ -0.49
SMPD4P1-201ENST00000416717 POTEB3A0JP26 581 aa11.98□□□□□ -0.49
SMPD4P1-201ENST00000416717 POTECB2RU33 542 aa11.98□□□□□ -0.49
SMPD4P1-201ENST00000416717 MSH4O15457 936 aa11.98□□□□□ -0.49
SMPD4P1-201ENST00000416717 KLRC4O43908 158 aa11.98□□□□□ -0.49
SMPD4P1-201ENST00000416717 VGLL4Q14135 290 aa11.98□□□□□ -0.49
SMPD4P1-201ENST00000416717 ARID5BQ14865 1188 aa11.98□□□□□ -0.49
SMPD4P1-201ENST00000416717 POTEBQ6S5H4 581 aa11.98□□□□□ -0.49
SMPD4P1-201ENST00000416717 MOB2Q70IA6 237 aa11.98□□□□□ -0.49
SMPD4P1-201ENST00000416717 SV2BQ7L1I2 683 aa11.98□□□□□ -0.49
SMPD4P1-201ENST00000416717 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.98□□□□□ -0.49
SMPD4P1-201ENST00000416717 LARP4BQ92615 738 aaKnown RBP11.98□□□□□ -0.49
SMPD4P1-201ENST00000416717 HPS3Q969F9 1004 aa11.98□□□□□ -0.49
SMPD4P1-201ENST00000416717 MBOAT7Q96N66 472 aa11.98□□□□□ -0.49
SMPD4P1-201ENST00000416717 TRIM9Q9C026 710 aa11.98□□□□□ -0.49
SMPD4P1-201ENST00000416717 KCNF1Q9H3M0 494 aa11.98□□□□□ -0.49
SMPD4P1-201ENST00000416717 RMND1Q9NWS8 449 aa11.98□□□□□ -0.49
SMPD4P1-201ENST00000416717 COL20A1Q9P218 1284 aa11.98□□□□□ -0.49
SMPD4P1-201ENST00000416717 KIAA1024Q9UPX6 916 aa11.98□□□□□ -0.49
SMPD4P1-201ENST00000416717 ZBED4O75132 1171 aa11.97□□□□□ -0.49
SMPD4P1-201ENST00000416717 PRCPP42785 496 aa11.97□□□□□ -0.49
SMPD4P1-201ENST00000416717 UBASH3AP57075 661 aa11.97□□□□□ -0.49
SMPD4P1-201ENST00000416717 LRMPQ12912 555 aa11.97□□□□□ -0.49
SMPD4P1-201ENST00000416717 Q4G0T1 1027 aa11.97□□□□□ -0.49
SMPD4P1-201ENST00000416717 EAPPQ56P03 285 aaPredicted RBP11.97□□□□□ -0.49
SMPD4P1-201ENST00000416717 ZNF658Q5TYW1 1059 aaPredicted RBP11.97□□□□□ -0.49
SMPD4P1-201ENST00000416717 MOXD1Q6UVY6 613 aa11.97□□□□□ -0.49
SMPD4P1-201ENST00000416717 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.97□□□□□ -0.49
SMPD4P1-201ENST00000416717 SLFN12Q8IYM2 578 aa11.97□□□□□ -0.49
SMPD4P1-201ENST00000416717 C17orf53Q8N3J3 647 aaPredicted RBP11.97□□□□□ -0.49
SMPD4P1-201ENST00000416717 ENOX1Q8TC92 643 aaKnown RBP11.97□□□□□ -0.49
SMPD4P1-201ENST00000416717 CLEC4DQ8WXI8 215 aa11.97□□□□□ -0.49
SMPD4P1-201ENST00000416717 CUEDC2Q9H467 287 aa11.97□□□□□ -0.49
SMPD4P1-201ENST00000416717 PTPRFP10586 1907 aa11.97□□□□□ -0.49
SMPD4P1-201ENST00000416717 WDR90Q96KV7 1748 aa11.97□□□□□ -0.49
SMPD4P1-201ENST00000416717 PITPNM2Q9BZ72 1349 aa11.97□□□□□ -0.49
SMPD4P1-201ENST00000416717 MYMKA6NI61 221 aa11.97□□□□□ -0.49
SMPD4P1-201ENST00000416717 E9PMD0 336 aa11.97□□□□□ -0.49
SMPD4P1-201ENST00000416717 VWA5AO00534 786 aa11.97□□□□□ -0.49
SMPD4P1-201ENST00000416717 ERCC5P28715 1186 aaPredicted RBP11.97□□□□□ -0.49
SMPD4P1-201ENST00000416717 PDE4DQ08499 809 aa11.97□□□□□ -0.49
SMPD4P1-201ENST00000416717 TTLL12Q14166 644 aaPredicted RBP11.97□□□□□ -0.49
SMPD4P1-201ENST00000416717 TPD52L1Q16890 204 aaPredicted RBP11.97□□□□□ -0.49
SMPD4P1-201ENST00000416717 TMC6Q7Z403 805 aa11.97□□□□□ -0.49
SMPD4P1-201ENST00000416717 CREBRFQ8IUR6 639 aa11.97□□□□□ -0.49
SMPD4P1-201ENST00000416717 NAP1L5Q96NT1 182 aaPredicted RBP11.97□□□□□ -0.49
SMPD4P1-201ENST00000416717 PURBQ96QR8 312 aaKnown RBP11.97□□□□□ -0.49
SMPD4P1-201ENST00000416717 RIPK3Q9Y572 518 aa11.97□□□□□ -0.49
SMPD4P1-201ENST00000416717 SNCAIPQ9Y6H5 919 aa11.97□□□□□ -0.49
SMPD4P1-201ENST00000416717 IGLV3-22A0A075B6J6 115 aa11.96□□□□□ -0.49
SMPD4P1-201ENST00000416717 POTEFA5A3E0 1075 aa11.96□□□□□ -0.49
SMPD4P1-201ENST00000416717 MEIS1O00470 390 aa11.96□□□□□ -0.49
SMPD4P1-201ENST00000416717 CHMP2AO43633 222 aa11.96□□□□□ -0.49
SMPD4P1-201ENST00000416717 MED24O75448 989 aa11.96□□□□□ -0.49
SMPD4P1-201ENST00000416717 POTEIP0CG38 1075 aa11.96□□□□□ -0.49
SMPD4P1-201ENST00000416717 CDC25BP30305 580 aa11.96□□□□□ -0.49
SMPD4P1-201ENST00000416717 CIITAP33076 1130 aa11.96□□□□□ -0.49
SMPD4P1-201ENST00000416717 EPHX2P34913 555 aa11.96□□□□□ -0.49
SMPD4P1-201ENST00000416717 MAP3K9P80192 1104 aa11.96□□□□□ -0.49
SMPD4P1-201ENST00000416717 AMPD3Q01432 767 aa11.96□□□□□ -0.49
SMPD4P1-201ENST00000416717 CYP4A11Q02928 519 aa11.96□□□□□ -0.49
SMPD4P1-201ENST00000416717 POTEGQ6S5H5 508 aa11.96□□□□□ -0.49
SMPD4P1-201ENST00000416717 POTEEQ6S8J3 1075 aa11.96□□□□□ -0.49
SMPD4P1-201ENST00000416717 NSMFQ6X4W1 530 aa11.96□□□□□ -0.49
SMPD4P1-201ENST00000416717 NELFBQ8WX92 580 aa11.96□□□□□ -0.49
SMPD4P1-201ENST00000416717 RAD54LQ92698 747 aa11.96□□□□□ -0.49
SMPD4P1-201ENST00000416717 TRERF1Q96PN7 1200 aa11.96□□□□□ -0.49
SMPD4P1-201ENST00000416717 MAGEF1Q9HAY2 307 aa11.96□□□□□ -0.49
SMPD4P1-201ENST00000416717 TMOD4Q9NZQ9 345 aa11.96□□□□□ -0.49
SMPD4P1-201ENST00000416717 PKD2L1Q9P0L9 805 aa11.96□□□□□ -0.49
SMPD4P1-201ENST00000416717 AFG3L2Q9Y4W6 797 aa11.96□□□□□ -0.49
SMPD4P1-201ENST00000416717 RBBP6Q7Z6E9 1792 aaKnown RBP11.96□□□□□ -0.5
SMPD4P1-201ENST00000416717 TRIM49BA6NDI0 452 aa11.95□□□□□ -0.5
SMPD4P1-201ENST00000416717 PPP1R12BO60237 982 aaPredicted RBP11.95□□□□□ -0.5
SMPD4P1-201ENST00000416717 CYP3A4P08684 503 aa11.95□□□□□ -0.5
SMPD4P1-201ENST00000416717 FCER1AP12319 257 aa11.95□□□□□ -0.5
SMPD4P1-201ENST00000416717 IDEP14735 1019 aa11.95□□□□□ -0.5
SMPD4P1-201ENST00000416717 SPIRE1Q08AE8 756 aa11.95□□□□□ -0.5
SMPD4P1-201ENST00000416717 RAD51AP2Q09MP3 1159 aa11.95□□□□□ -0.5
SMPD4P1-201ENST00000416717 PLS1Q14651 629 aa11.95□□□□□ -0.5
SMPD4P1-201ENST00000416717 TMEM119Q4V9L6 283 aa11.95□□□□□ -0.5
SMPD4P1-201ENST00000416717 IL31RAQ8NI17 732 aa11.95□□□□□ -0.5
SMPD4P1-201ENST00000416717 C7orf25Q9BPX7 421 aa11.95□□□□□ -0.5
SMPD4P1-201ENST00000416717 ELP3Q9H9T3 547 aa11.95□□□□□ -0.5
SMPD4P1-201ENST00000416717 EXOC1Q9NV70 894 aa11.95□□□□□ -0.5
SMPD4P1-201ENST00000416717 STK17AQ9UEE5 414 aa11.95□□□□□ -0.5
SMPD4P1-201ENST00000416717 C19orf81C9J6K1 198 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms