RNA–Protein interactions for RNA: ENST00000416093.1

RAF1-202, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene RAF1, Length 962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-202ENST00000416093 DUSP28Q4G0W2 176 aa17.25■□□□□ 0.35
RAF1-202ENST00000416093 FAM109BQ6ICB4 259 aaPredicted RBP17.25■□□□□ 0.35
RAF1-202ENST00000416093 RGS22Q8NE09 1264 aa17.25■□□□□ 0.35
RAF1-202ENST00000416093 ZNF274Q96GC6 653 aaPredicted RBP17.25■□□□□ 0.35
RAF1-202ENST00000416093 FAM161BQ96MY7 647 aa17.25■□□□□ 0.35
RAF1-202ENST00000416093 hCG_1642624A0A1W2PR95 340 aa17.24■□□□□ 0.35
RAF1-202ENST00000416093 TLR3O15455 904 aaKnown RBP17.24■□□□□ 0.35
RAF1-202ENST00000416093 ZEB2O60315 1214 aa17.24■□□□□ 0.35
RAF1-202ENST00000416093 CABYRO75952 493 aa17.24■□□□□ 0.35
RAF1-202ENST00000416093 CD4P01730 458 aa17.24■□□□□ 0.35
RAF1-202ENST00000416093 EDNRBP24530 442 aa17.24■□□□□ 0.35
RAF1-202ENST00000416093 AK2P54819 239 aa17.24■□□□□ 0.35
RAF1-202ENST00000416093 PSMC6P62333 389 aa17.24■□□□□ 0.35
RAF1-202ENST00000416093 PDE4DQ08499 809 aa17.24■□□□□ 0.35
RAF1-202ENST00000416093 ITGA7Q13683 1181 aa17.24■□□□□ 0.35
RAF1-202ENST00000416093 MFSD5Q6N075 450 aa17.24■□□□□ 0.35
RAF1-202ENST00000416093 DNERQ8NFT8 737 aa17.24■□□□□ 0.35
RAF1-202ENST00000416093 RNPC3Q96LT9 517 aaKnown RBP17.24■□□□□ 0.35
RAF1-202ENST00000416093 FUT2Q10981 343 aa17.23■□□□□ 0.35
RAF1-202ENST00000416093 STK3Q13188 491 aa17.23■□□□□ 0.35
RAF1-202ENST00000416093 MCF2L2Q86YR7 1114 aa17.23■□□□□ 0.35
RAF1-202ENST00000416093 OR6J1Q8NGC5 347 aa17.23■□□□□ 0.35
RAF1-202ENST00000416093 COPS5Q92905 334 aa17.23■□□□□ 0.35
RAF1-202ENST00000416093 TAAR1Q96RJ0 339 aa17.23■□□□□ 0.35
RAF1-202ENST00000416093 KIF2CQ99661 725 aa17.23■□□□□ 0.35
RAF1-202ENST00000416093 PPP1R12CQ9BZL4 782 aa17.23■□□□□ 0.35
RAF1-202ENST00000416093 STXBP5LQ9Y2K9 1186 aa17.23■□□□□ 0.35
RAF1-202ENST00000416093 V9GY48 417 aaPredicted RBP17.23■□□□□ 0.35
RAF1-202ENST00000416093 NID2Q14112 1375 aa17.23■□□□□ 0.35
RAF1-202ENST00000416093 CNTNAP5Q8WYK1 1306 aa17.22■□□□□ 0.35
RAF1-202ENST00000416093 MYH6P13533 1939 aa17.22■□□□□ 0.35
RAF1-202ENST00000416093 SMAD3P84022 425 aaKnown RBP17.22■□□□□ 0.35
RAF1-202ENST00000416093 C16orf59Q7L2K0 433 aa17.22■□□□□ 0.35
RAF1-202ENST00000416093 SLC17A8Q8NDX2 589 aa17.22■□□□□ 0.35
RAF1-202ENST00000416093 SYTL5Q8TDW5 730 aaPredicted RBP17.22■□□□□ 0.35
RAF1-202ENST00000416093 GUCD1Q96NT3 240 aa17.22■□□□□ 0.35
RAF1-202ENST00000416093 MAF1Q9H063 256 aa17.22■□□□□ 0.35
RAF1-202ENST00000416093 TRPV6Q9H1D0 765 aa17.22■□□□□ 0.35
RAF1-202ENST00000416093 NCOA5Q9HCD5 579 aaKnown RBP17.22■□□□□ 0.35
RAF1-202ENST00000416093 COL20A1Q9P218 1284 aa17.22■□□□□ 0.35
RAF1-202ENST00000416093 TPCN1Q9ULQ1 816 aa17.22■□□□□ 0.35
RAF1-202ENST00000416093 CFBP00751 764 aa17.21■□□□□ 0.35
RAF1-202ENST00000416093 MYL3P08590 195 aa17.21■□□□□ 0.35
RAF1-202ENST00000416093 CSF2RAP15509 400 aa17.21■□□□□ 0.35
RAF1-202ENST00000416093 CYP2C18P33260 490 aa17.21■□□□□ 0.35
RAF1-202ENST00000416093 ZNF697Q5TEC3 545 aa17.21■□□□□ 0.35
RAF1-202ENST00000416093 MPHOSPH6Q99547 160 aaKnown RBP17.21■□□□□ 0.35
RAF1-202ENST00000416093 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.21■□□□□ 0.351e-7■□□□□ 9.9
RAF1-202ENST00000416093 SLKQ9H2G2 1235 aaPredicted RBP17.21■□□□□ 0.35
RAF1-202ENST00000416093 LAMA2P24043 3122 aaKnown RBP17.21■□□□□ 0.35
RAF1-202ENST00000416093 B4DLN1 442 aa17.2■□□□□ 0.34
RAF1-202ENST00000416093 B4GALT4O60513 344 aa17.2■□□□□ 0.34
RAF1-202ENST00000416093 ARIH2O95376 493 aa17.2■□□□□ 0.34
RAF1-202ENST00000416093 ACRP10323 421 aa17.2■□□□□ 0.34
RAF1-202ENST00000416093 MRPL12P52815 198 aaKnown RBP17.2■□□□□ 0.34
RAF1-202ENST00000416093 PPIGQ13427 754 aaKnown RBP eCLIP17.2■□□□□ 0.341e-8■■■□□ 14.6
RAF1-202ENST00000416093 NTRK3Q16288 839 aa17.2■□□□□ 0.34
RAF1-202ENST00000416093 TMEM240Q5SV17 173 aa17.2■□□□□ 0.34
RAF1-202ENST00000416093 SCFD2Q8WU76 684 aa17.2■□□□□ 0.34
RAF1-202ENST00000416093 TBC1D32Q96NH3 1257 aa17.2■□□□□ 0.34
RAF1-202ENST00000416093 SEMA6BQ9H3T3 888 aa17.2■□□□□ 0.34
RAF1-202ENST00000416093 POLR3EQ9NVU0 708 aa17.2■□□□□ 0.34
RAF1-202ENST00000416093 UMODL1Q5DID0 1318 aa17.2■□□□□ 0.34
RAF1-202ENST00000416093 CPLX1O14810 134 aa17.19■□□□□ 0.34
RAF1-202ENST00000416093 OPLAHO14841 1288 aa17.19■□□□□ 0.34
RAF1-202ENST00000416093 NKRFO15226 690 aaKnown RBP eCLIP17.19■□□□□ 0.34
RAF1-202ENST00000416093 PRPF3O43395 683 aaKnown RBP17.19■□□□□ 0.34
RAF1-202ENST00000416093 PFKFB2O60825 505 aa17.19■□□□□ 0.34
RAF1-202ENST00000416093 TXNP10599 105 aaKnown RBP17.19■□□□□ 0.34
RAF1-202ENST00000416093 IFNAR1P17181 557 aa17.19■□□□□ 0.34
RAF1-202ENST00000416093 CPT1AP50416 773 aa17.19■□□□□ 0.34
RAF1-202ENST00000416093 PURAQ00577 322 aaKnown RBP17.19■□□□□ 0.34
RAF1-202ENST00000416093 AKAP17AQ02040 695 aaKnown RBP17.19■□□□□ 0.34
RAF1-202ENST00000416093 RABEP1Q15276 862 aa17.19■□□□□ 0.34
RAF1-202ENST00000416093 CPLX2Q6PUV4 134 aaKnown RBP17.19■□□□□ 0.34
RAF1-202ENST00000416093 HEATR3Q7Z4Q2 680 aa17.19■□□□□ 0.34
RAF1-202ENST00000416093 TMEM199Q8N511 208 aa17.19■□□□□ 0.34
RAF1-202ENST00000416093 SAMD3Q8N6K7 520 aa17.19■□□□□ 0.34
RAF1-202ENST00000416093 PPP1R13LQ8WUF5 828 aa17.19■□□□□ 0.34
RAF1-202ENST00000416093 PHKBQ93100 1093 aa17.19■□□□□ 0.34
RAF1-202ENST00000416093 TTYH1Q9H313 450 aaPredicted RBP17.19■□□□□ 0.34
RAF1-202ENST00000416093 GCOM1H8Y6P7 765 aaPredicted RBP17.18■□□□□ 0.34
RAF1-202ENST00000416093 PPFIA3O75145 1194 aa17.18■□□□□ 0.34
RAF1-202ENST00000416093 POLR2MP0CAP2 368 aa17.18■□□□□ 0.34
RAF1-202ENST00000416093 SCRN1Q12765 414 aa17.18■□□□□ 0.34
RAF1-202ENST00000416093 CCDC62Q6P9F0 684 aa17.18■□□□□ 0.34
RAF1-202ENST00000416093 SEPT14Q6ZU15 432 aa17.18■□□□□ 0.34
RAF1-202ENST00000416093 ZNF365Q70YC5 407 aa17.18■□□□□ 0.34
RAF1-202ENST00000416093 NSUN6Q8TEA1 469 aaKnown RBP17.18■□□□□ 0.34
RAF1-202ENST00000416093 GPKOWQ92917 476 aaPredicted RBP eCLIP17.18■□□□□ 0.344e-6■■■□□ 16.6
RAF1-202ENST00000416093 RMDN3Q96TC7 470 aa17.18■□□□□ 0.34
RAF1-202ENST00000416093 MTG1Q9BT17 334 aaPredicted RBP17.18■□□□□ 0.34
RAF1-202ENST00000416093 SEZ6LQ9BYH1 1024 aa17.18■□□□□ 0.34
RAF1-202ENST00000416093 HIPK3Q9H422 1215 aa17.18■□□□□ 0.34
RAF1-202ENST00000416093 MAP3K20Q9NYL2 800 aaKnown RBP17.18■□□□□ 0.34
RAF1-202ENST00000416093 COL6A3P12111 3177 aa17.18■□□□□ 0.34
RAF1-202ENST00000416093 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.17■□□□□ 0.34
RAF1-202ENST00000416093 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.17■□□□□ 0.34
RAF1-202ENST00000416093 HOXA13P31271 388 aaPredicted RBP17.17■□□□□ 0.34
RAF1-202ENST00000416093 HSD17B4P51659 736 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms