RNA–Protein interactions for RNA: ENST00000415361.6

CTNND1-206, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-206ENST00000415361 LMNB1P20700 586 aa9.25□□□□□ -0.93
CTNND1-206ENST00000415361 RASSF2P50749 326 aa9.25□□□□□ -0.93
CTNND1-206ENST00000415361 MFAP3P55082 362 aa9.25□□□□□ -0.93
CTNND1-206ENST00000415361 SEPT6Q14141 434 aa9.25□□□□□ -0.93
CTNND1-206ENST00000415361 KRT12Q99456 494 aa9.25□□□□□ -0.93
CTNND1-206ENST00000415361 HAUS8Q9BT25 410 aa9.25□□□□□ -0.93
CTNND1-206ENST00000415361 STK17AQ9UEE5 414 aa9.25□□□□□ -0.93
CTNND1-206ENST00000415361 GRIN3BO60391 1043 aa9.25□□□□□ -0.93
CTNND1-206ENST00000415361 SATB1Q01826 763 aa9.25□□□□□ -0.93
CTNND1-206ENST00000415361 PHLDB2Q86SQ0 1253 aa9.25□□□□□ -0.93
CTNND1-206ENST00000415361 ZNF589Q86UQ0 364 aaPredicted RBP9.25□□□□□ -0.93
CTNND1-206ENST00000415361 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.25□□□□□ -0.93
CTNND1-206ENST00000415361 SH3RF3Q8TEJ3 882 aaPredicted RBP9.25□□□□□ -0.93
CTNND1-206ENST00000415361 CCDC68Q9H2F9 335 aa9.25□□□□□ -0.93
CTNND1-206ENST00000415361 VPS37BQ9H9H4 285 aa9.25□□□□□ -0.93
CTNND1-206ENST00000415361 ST7Q9NRC1 585 aa9.25□□□□□ -0.93
CTNND1-206ENST00000415361 S100BP04271 92 aaPredicted RBP9.25□□□□□ -0.93
CTNND1-206ENST00000415361 TROVE2P10155 538 aaKnown RBP eCLIP9.25□□□□□ -0.93
CTNND1-206ENST00000415361 SLC16A2P36021 539 aa9.25□□□□□ -0.93
CTNND1-206ENST00000415361 FAM173BQ6P4H8 233 aa9.25□□□□□ -0.93
CTNND1-206ENST00000415361 OSBP2Q969R2 916 aa9.25□□□□□ -0.93
CTNND1-206ENST00000415361 KANSL2Q9H9L4 492 aa9.25□□□□□ -0.93
CTNND1-206ENST00000415361 TBC1D8O95759 1140 aa9.24□□□□□ -0.93
CTNND1-206ENST00000415361 ADD1P35611 737 aaKnown RBP9.24□□□□□ -0.93
CTNND1-206ENST00000415361 TECP42680 631 aa9.24□□□□□ -0.93
CTNND1-206ENST00000415361 SURF1Q15526 300 aa9.24□□□□□ -0.93
CTNND1-206ENST00000415361 LMNTD2Q8IXW0 634 aa9.24□□□□□ -0.93
CTNND1-206ENST00000415361 OR8K1Q8NGG5 319 aa9.24□□□□□ -0.93
CTNND1-206ENST00000415361 ANO3Q9BYT9 981 aa9.24□□□□□ -0.93
CTNND1-206ENST00000415361 SLC12A6Q9UHW9 1150 aa9.24□□□□□ -0.93
CTNND1-206ENST00000415361 ZNF215Q9UL58 517 aaPredicted RBP9.24□□□□□ -0.93
CTNND1-206ENST00000415361 FAM196BA6NMK8 535 aa9.24□□□□□ -0.93
CTNND1-206ENST00000415361 RNF8O76064 485 aa9.24□□□□□ -0.93
CTNND1-206ENST00000415361 CMA1P23946 247 aa9.24□□□□□ -0.93
CTNND1-206ENST00000415361 PIK3CAP42336 1068 aa9.24□□□□□ -0.93
CTNND1-206ENST00000415361 POLA2Q14181 598 aa9.24□□□□□ -0.93
CTNND1-206ENST00000415361 FAM160B2Q86V87 743 aa9.24□□□□□ -0.93
CTNND1-206ENST00000415361 COL23A1Q86Y22 540 aaPredicted RBP9.24□□□□□ -0.93
CTNND1-206ENST00000415361 TRIM56Q9BRZ2 755 aaKnown RBP9.24□□□□□ -0.93
CTNND1-206ENST00000415361 RPAP1Q9BWH6 1393 aaPredicted RBP9.24□□□□□ -0.93
CTNND1-206ENST00000415361 MROH2AA6NES4 1674 aa9.24□□□□□ -0.93
CTNND1-206ENST00000415361 A6NJR5 290 aa9.24□□□□□ -0.93
CTNND1-206ENST00000415361 MYL1P05976 194 aa9.24□□□□□ -0.93
CTNND1-206ENST00000415361 ARHGAP25P42331 645 aa9.24□□□□□ -0.93
CTNND1-206ENST00000415361 PPP2R5DQ14738 602 aa9.24□□□□□ -0.93
CTNND1-206ENST00000415361 RNF169Q8NCN4 708 aa9.24□□□□□ -0.93
CTNND1-206ENST00000415361 HYOU1Q9Y4L1 999 aa9.24□□□□□ -0.93
CTNND1-206ENST00000415361 KRT3P12035 628 aa9.24□□□□□ -0.93
CTNND1-206ENST00000415361 HPDP32754 393 aaPredicted RBP9.24□□□□□ -0.93
CTNND1-206ENST00000415361 TTC31Q49AM3 519 aaPredicted RBP9.24□□□□□ -0.93
CTNND1-206ENST00000415361 SLC16A10Q8TF71 515 aa9.24□□□□□ -0.93
CTNND1-206ENST00000415361 BLZF1Q9H2G9 400 aa9.24□□□□□ -0.93
CTNND1-206ENST00000415361 STAP2Q9UGK3 403 aa9.24□□□□□ -0.93
CTNND1-206ENST00000415361 PNMA3Q9UL41 463 aa9.24□□□□□ -0.93
CTNND1-206ENST00000415361 PCDHA1Q9Y5I3 950 aa9.24□□□□□ -0.93
CTNND1-206ENST00000415361 RNF40O75150 1001 aa9.23□□□□□ -0.93
CTNND1-206ENST00000415361 TYW1BQ6NUM6 668 aa9.23□□□□□ -0.93
CTNND1-206ENST00000415361 ACCSQ96QU6 501 aa9.23□□□□□ -0.93
CTNND1-206ENST00000415361 WRNIP1Q96S55 665 aa9.23□□□□□ -0.93
CTNND1-206ENST00000415361 CNTNAP4Q9C0A0 1308 aa9.23□□□□□ -0.93
CTNND1-206ENST00000415361 IQCA1LA6NCM1 817 aa9.23□□□□□ -0.93
CTNND1-206ENST00000415361 ZNF445P59923 1031 aa9.23□□□□□ -0.93
CTNND1-206ENST00000415361 RAD51AP2Q09MP3 1159 aa9.23□□□□□ -0.93
CTNND1-206ENST00000415361 ALCAMQ13740 583 aa9.23□□□□□ -0.93
CTNND1-206ENST00000415361 SEPT2Q15019 361 aa9.23□□□□□ -0.93
CTNND1-206ENST00000415361 TSNAXIP1Q2TAA8 658 aa9.23□□□□□ -0.93
CTNND1-206ENST00000415361 DNAJC21Q5F1R6 531 aaKnown RBP9.23□□□□□ -0.93
CTNND1-206ENST00000415361 KLHL7Q8IXQ5 586 aa9.23□□□□□ -0.93
CTNND1-206ENST00000415361 CDKL2Q92772 493 aa9.23□□□□□ -0.93
CTNND1-206ENST00000415361 ZNF341Q9BYN7 854 aa9.23□□□□□ -0.93
CTNND1-206ENST00000415361 TMEM206Q9H813 350 aa9.23□□□□□ -0.93
CTNND1-206ENST00000415361 TTLL3Q9Y4R7 772 aa9.23□□□□□ -0.93
CTNND1-206ENST00000415361 PTK2Q05397 1052 aa9.23□□□□□ -0.93
CTNND1-206ENST00000415361 RPS6KA2Q15349 733 aa9.23□□□□□ -0.93
CTNND1-206ENST00000415361 TSC1Q92574 1164 aa9.23□□□□□ -0.93
CTNND1-206ENST00000415361 HVCN1Q96D96 273 aa9.23□□□□□ -0.93
CTNND1-206ENST00000415361 PCDHA4Q9UN74 947 aa9.23□□□□□ -0.93
CTNND1-206ENST00000415361 PLEKHG2Q9H7P9 1386 aa9.23□□□□□ -0.93
CTNND1-206ENST00000415361 LRRIQ4A6NIV6 560 aa9.23□□□□□ -0.93
CTNND1-206ENST00000415361 MED7O43513 233 aa9.23□□□□□ -0.93
CTNND1-206ENST00000415361 PFKFB1P16118 471 aa9.23□□□□□ -0.93
CTNND1-206ENST00000415361 ZSCAN20P17040 1043 aaPredicted RBP9.23□□□□□ -0.93
CTNND1-206ENST00000415361 ZNF131P52739 623 aa9.23□□□□□ -0.93
CTNND1-206ENST00000415361 UBXN2AP68543 259 aa9.23□□□□□ -0.93
CTNND1-206ENST00000415361 VSIG1Q86XK7 387 aa9.23□□□□□ -0.93
CTNND1-206ENST00000415361 SIRT2Q8IXJ6 389 aa9.23□□□□□ -0.93
CTNND1-206ENST00000415361 ZNF34Q8IZ26 560 aa9.23□□□□□ -0.93
CTNND1-206ENST00000415361 SLC7A3Q8WY07 619 aa9.23□□□□□ -0.93
CTNND1-206ENST00000415361 CRAMP1Q96RY5 1269 aa9.23□□□□□ -0.93
CTNND1-206ENST00000415361 TTC1Q99614 292 aa9.23□□□□□ -0.93
CTNND1-206ENST00000415361 ZSWIM6Q9HCJ5 1215 aa9.23□□□□□ -0.93
CTNND1-206ENST00000415361 USP42Q9H9J4 1324 aaKnown RBP9.23□□□□□ -0.93
CTNND1-206ENST00000415361 GH2P01242 217 aa9.23□□□□□ -0.93
CTNND1-206ENST00000415361 NFKBIAP25963 317 aa9.23□□□□□ -0.93
CTNND1-206ENST00000415361 NSFP46459 744 aaKnown RBP9.23□□□□□ -0.93
CTNND1-206ENST00000415361 SLFNL1Q499Z3 407 aa9.23□□□□□ -0.93
CTNND1-206ENST00000415361 FAM26FQ5R3K3 315 aa9.23□□□□□ -0.93
CTNND1-206ENST00000415361 LRCH2Q5VUJ6 765 aa9.23□□□□□ -0.93
CTNND1-206ENST00000415361 SCYL2Q6P3W7 929 aa9.23□□□□□ -0.93
CTNND1-206ENST00000415361 TBC1D16Q8TBP0 767 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms