RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 NR3C2P08235 984 aa14.49□□□□□ -0.09
NCKIPSD-203ENST00000415281 EIF2AK2P19525 551 aaKnown RBP14.49□□□□□ -0.09
NCKIPSD-203ENST00000415281 PTPN11Q06124 597 aaPredicted RBP14.49□□□□□ -0.09
NCKIPSD-203ENST00000415281 TROAPQ12815 778 aa14.49□□□□□ -0.09
NCKIPSD-203ENST00000415281 IFIT1BQ5T764 474 aaKnown RBP14.49□□□□□ -0.09
NCKIPSD-203ENST00000415281 TRAF7Q6Q0C0 670 aa14.49□□□□□ -0.09
NCKIPSD-203ENST00000415281 CHST3Q7LGC8 479 aa14.49□□□□□ -0.09
NCKIPSD-203ENST00000415281 SESTD1Q86VW0 696 aa14.49□□□□□ -0.09
NCKIPSD-203ENST00000415281 GPKOWQ92917 476 aaPredicted RBP eCLIP14.49□□□□□ -0.09
NCKIPSD-203ENST00000415281 WNT8BQ93098 351 aa14.49□□□□□ -0.09
NCKIPSD-203ENST00000415281 ZFP91Q96JP5 570 aaPredicted RBP14.49□□□□□ -0.09
NCKIPSD-203ENST00000415281 PDCD2LQ9BRP1 358 aa14.49□□□□□ -0.09
NCKIPSD-203ENST00000415281 CNNM2Q9H8M5 875 aa14.49□□□□□ -0.09
NCKIPSD-203ENST00000415281 GPHNQ9NQX3 736 aaPredicted RBP14.49□□□□□ -0.09
NCKIPSD-203ENST00000415281 MRPL11Q9Y3B7 192 aaKnown RBP14.49□□□□□ -0.09
NCKIPSD-203ENST00000415281 DOCK5Q9H7D0 1870 aa14.48□□□□□ -0.09
NCKIPSD-203ENST00000415281 E7EWF7 191 aa14.48□□□□□ -0.09
NCKIPSD-203ENST00000415281 HAS3O00219 553 aa14.48□□□□□ -0.09
NCKIPSD-203ENST00000415281 SGSM2O43147 1006 aa14.48□□□□□ -0.09
NCKIPSD-203ENST00000415281 EIF3JO75822 258 aaKnown RBP14.48□□□□□ -0.09
NCKIPSD-203ENST00000415281 CFBP00751 764 aa14.48□□□□□ -0.09
NCKIPSD-203ENST00000415281 SUPT20HL2P0C7V6 817 aa14.48□□□□□ -0.09
NCKIPSD-203ENST00000415281 GRM4Q14833 912 aa14.48□□□□□ -0.09
NCKIPSD-203ENST00000415281 STXBP2Q15833 593 aa14.48□□□□□ -0.09
NCKIPSD-203ENST00000415281 FAM47CQ5HY64 1035 aa14.48□□□□□ -0.09
NCKIPSD-203ENST00000415281 CENPQQ7L2Z9 268 aaPredicted RBP14.48□□□□□ -0.09
NCKIPSD-203ENST00000415281 SPRED2Q7Z698 418 aa14.48□□□□□ -0.09
NCKIPSD-203ENST00000415281 DEFB128Q7Z7B8 93 aa14.48□□□□□ -0.09
NCKIPSD-203ENST00000415281 VSIG10LQ86VR7 867 aa14.48□□□□□ -0.09
NCKIPSD-203ENST00000415281 MCF2L2Q86YR7 1114 aa14.48□□□□□ -0.09
NCKIPSD-203ENST00000415281 RPUSD2Q8IZ73 545 aaKnown RBP14.48□□□□□ -0.09
NCKIPSD-203ENST00000415281 IGDCC4Q8TDY8 1250 aa14.48□□□□□ -0.09
NCKIPSD-203ENST00000415281 MAP4K1Q92918 833 aa14.48□□□□□ -0.09
NCKIPSD-203ENST00000415281 EMID1Q96A84 441 aaPredicted RBP14.48□□□□□ -0.09
NCKIPSD-203ENST00000415281 PIGSQ96S52 555 aa14.48□□□□□ -0.09
NCKIPSD-203ENST00000415281 AMNQ9BXJ7 453 aa14.48□□□□□ -0.09
NCKIPSD-203ENST00000415281 TELO2Q9Y4R8 837 aa14.48□□□□□ -0.09
NCKIPSD-203ENST00000415281 RFXAPO00287 272 aa14.47□□□□□ -0.09
NCKIPSD-203ENST00000415281 PITPNM1O00562 1244 aa14.47□□□□□ -0.09
NCKIPSD-203ENST00000415281 ZBTB5O15062 677 aa14.47□□□□□ -0.09
NCKIPSD-203ENST00000415281 GH1P01241 217 aa14.47□□□□□ -0.09
NCKIPSD-203ENST00000415281 HOXD8P13378 290 aaPredicted RBP14.47□□□□□ -0.09
NCKIPSD-203ENST00000415281 HOXA13P31271 388 aaPredicted RBP14.47□□□□□ -0.09
NCKIPSD-203ENST00000415281 RAB30Q15771 203 aa14.47□□□□□ -0.09
NCKIPSD-203ENST00000415281 TRIM71Q2Q1W2 868 aaKnown RBP14.47□□□□□ -0.09
NCKIPSD-203ENST00000415281 UBAC1Q9BSL1 405 aa14.47□□□□□ -0.09
NCKIPSD-203ENST00000415281 SLC4A7Q9Y6M7 1214 aa14.47□□□□□ -0.09
NCKIPSD-203ENST00000415281 RAD50Q92878 1312 aa14.46□□□□□ -0.09
NCKIPSD-203ENST00000415281 EPOPA6NHQ4 379 aa14.46□□□□□ -0.09
NCKIPSD-203ENST00000415281 ZNF200P98182 395 aaPredicted RBP14.46□□□□□ -0.09
NCKIPSD-203ENST00000415281 PGM5Q15124 567 aa14.46□□□□□ -0.09
NCKIPSD-203ENST00000415281 HSDL1Q3SXM5 330 aa14.46□□□□□ -0.09
NCKIPSD-203ENST00000415281 ARHGEF16Q5VV41 709 aa14.46□□□□□ -0.09
NCKIPSD-203ENST00000415281 MYSM1Q5VVJ2 828 aa14.46□□□□□ -0.09
NCKIPSD-203ENST00000415281 SKAP1Q86WV1 359 aa14.46□□□□□ -0.09
NCKIPSD-203ENST00000415281 MB21D2Q8IYB1 491 aaPredicted RBP14.46□□□□□ -0.09
NCKIPSD-203ENST00000415281 HDAC6Q9UBN7 1215 aa14.46□□□□□ -0.09
NCKIPSD-203ENST00000415281 MSRAQ9UJ68 235 aa14.46□□□□□ -0.09
NCKIPSD-203ENST00000415281 PCDHA11Q9Y5I1 949 aa14.46□□□□□ -0.09
NCKIPSD-203ENST00000415281 PCDHA1Q9Y5I3 950 aa14.46□□□□□ -0.09
NCKIPSD-203ENST00000415281 TTC28Q96AY4 2481 aa14.46□□□□□ -0.1
NCKIPSD-203ENST00000415281 DHX16O60231 1041 aaKnown RBP14.45□□□□□ -0.1
NCKIPSD-203ENST00000415281 PFKMP08237 780 aa14.45□□□□□ -0.1
NCKIPSD-203ENST00000415281 MRPS9P82933 396 aaKnown RBP14.45□□□□□ -0.1
NCKIPSD-203ENST00000415281 RBL2Q08999 1139 aa14.45□□□□□ -0.1
NCKIPSD-203ENST00000415281 SEMA3FQ13275 785 aa14.45□□□□□ -0.1
NCKIPSD-203ENST00000415281 MBTPS1Q14703 1052 aa14.45□□□□□ -0.1
NCKIPSD-203ENST00000415281 PTGISQ16647 500 aa14.45□□□□□ -0.1
NCKIPSD-203ENST00000415281 MPHOSPH6Q99547 160 aaKnown RBP14.45□□□□□ -0.1
NCKIPSD-203ENST00000415281 OSBPL7Q9BZF2 842 aa14.45□□□□□ -0.1
NCKIPSD-203ENST00000415281 GTF2IRD1Q9UHL9 959 aa14.45□□□□□ -0.1
NCKIPSD-203ENST00000415281 B4DLN1 442 aa14.44□□□□□ -0.1
NCKIPSD-203ENST00000415281 IFIT3O14879 490 aaKnown RBP14.44□□□□□ -0.1
NCKIPSD-203ENST00000415281 SORBS3O60504 671 aa14.44□□□□□ -0.1
NCKIPSD-203ENST00000415281 NBNO60934 754 aa14.44□□□□□ -0.1
NCKIPSD-203ENST00000415281 F2P00734 622 aa14.44□□□□□ -0.1
NCKIPSD-203ENST00000415281 MYCLP12524 364 aaPredicted RBP14.44□□□□□ -0.1
NCKIPSD-203ENST00000415281 ATP2A2P16615 1042 aaKnown RBP14.44□□□□□ -0.1
NCKIPSD-203ENST00000415281 CASTP20810 708 aaKnown RBP14.44□□□□□ -0.1
NCKIPSD-203ENST00000415281 RFC2P35250 354 aa14.44□□□□□ -0.1
NCKIPSD-203ENST00000415281 PSEN2P49810 448 aa14.44□□□□□ -0.1
NCKIPSD-203ENST00000415281 MRPL12P52815 198 aaKnown RBP14.44□□□□□ -0.1
NCKIPSD-203ENST00000415281 TMCO2Q7Z6W1 182 aaPredicted RBP14.44□□□□□ -0.1
NCKIPSD-203ENST00000415281 PPM1EQ8WY54 764 aa14.44□□□□□ -0.1
NCKIPSD-203ENST00000415281 C16orf70Q9BSU1 422 aa14.44□□□□□ -0.1
NCKIPSD-203ENST00000415281 SLC28A3Q9HAS3 691 aa14.44□□□□□ -0.1
NCKIPSD-203ENST00000415281 MAP3K20Q9NYL2 800 aaKnown RBP14.44□□□□□ -0.1
NCKIPSD-203ENST00000415281 U3KPZ7 1027 aaPredicted RBP14.44□□□□□ -0.1
NCKIPSD-203ENST00000415281 FRMPD4Q14CM0 1322 aa14.43□□□□□ -0.1
NCKIPSD-203ENST00000415281 ZBBXA8MT70 800 aa14.43□□□□□ -0.1
NCKIPSD-203ENST00000415281 CXCL10P02778 98 aa14.43□□□□□ -0.1
NCKIPSD-203ENST00000415281 CA3P07451 260 aa14.43□□□□□ -0.1
NCKIPSD-203ENST00000415281 ZNF286BP0CG31 522 aa14.43□□□□□ -0.1
NCKIPSD-203ENST00000415281 CKBP12277 381 aa14.43□□□□□ -0.1
NCKIPSD-203ENST00000415281 POU3F3P20264 500 aaPredicted RBP14.43□□□□□ -0.1
NCKIPSD-203ENST00000415281 CHMP4BP1P59074 171 aa14.43□□□□□ -0.1
NCKIPSD-203ENST00000415281 MKRN4PQ13434 485 aaPredicted RBP14.43□□□□□ -0.1
NCKIPSD-203ENST00000415281 LAMC2Q13753 1193 aa14.43□□□□□ -0.1
NCKIPSD-203ENST00000415281 CCDC85BQ15834 202 aaPredicted RBP14.43□□□□□ -0.1
NCKIPSD-203ENST00000415281 BRDTQ58F21 947 aaPredicted RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms