RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 ZNF396Q96N95 335 aaPredicted RBP15.12■□□□□ 0.01
CNN3-203ENST00000415017 INPP4AQ96PE3 977 aaPredicted RBP15.12■□□□□ 0.01
CNN3-203ENST00000415017 KATNBL1Q9H079 304 aa15.12■□□□□ 0.01
CNN3-203ENST00000415017 HTTP42858 3142 aa15.11■□□□□ 0.01
CNN3-203ENST00000415017 TNPO2O14787 897 aaKnown RBP15.11■□□□□ 0.01
CNN3-203ENST00000415017 FKTNO75072 461 aa15.11■□□□□ 0.01
CNN3-203ENST00000415017 TDP2O95551 362 aa15.11■□□□□ 0.01
CNN3-203ENST00000415017 YEATS4O95619 227 aa15.11■□□□□ 0.01
CNN3-203ENST00000415017 ITGB5P18084 799 aa15.11■□□□□ 0.01
CNN3-203ENST00000415017 EIF2AK2P19525 551 aaKnown RBP15.11■□□□□ 0.01
CNN3-203ENST00000415017 NBR1Q14596 966 aa15.11■□□□□ 0.01
CNN3-203ENST00000415017 SLC39A14Q15043 492 aa15.11■□□□□ 0.01
CNN3-203ENST00000415017 CEP55Q53EZ4 464 aa15.11■□□□□ 0.01
CNN3-203ENST00000415017 WDR78Q5VTH9 848 aa15.11■□□□□ 0.01
CNN3-203ENST00000415017 ARHGEF16Q5VV41 709 aa15.11■□□□□ 0.01
CNN3-203ENST00000415017 ANO1Q5XXA6 986 aa15.11■□□□□ 0.01
CNN3-203ENST00000415017 OLFML2BQ68BL8 750 aa15.11■□□□□ 0.01
CNN3-203ENST00000415017 CCAR1Q8IX12 1150 aaKnown RBP15.11■□□□□ 0.01
CNN3-203ENST00000415017 LINC00301Q8NCQ3 95 aa15.11■□□□□ 0.01
CNN3-203ENST00000415017 ZNF296Q8WUU4 475 aaPredicted RBP15.11■□□□□ 0.01
CNN3-203ENST00000415017 CHAMP1Q96JM3 812 aa15.11■□□□□ 0.01
CNN3-203ENST00000415017 MTMR9Q96QG7 549 aa15.11■□□□□ 0.01
CNN3-203ENST00000415017 NUDT12Q9BQG2 462 aa15.11■□□□□ 0.01
CNN3-203ENST00000415017 MXRA8Q9BRK3 442 aa15.11■□□□□ 0.01
CNN3-203ENST00000415017 FTOQ9C0B1 505 aaKnown RBP eCLIP15.11■□□□□ 0.01
CNN3-203ENST00000415017 KCNMB3Q9NPA1 279 aa15.11■□□□□ 0.01
CNN3-203ENST00000415017 CFAP45Q9UL16 551 aa15.11■□□□□ 0.01
CNN3-203ENST00000415017 CLIC4Q9Y696 253 aa15.11■□□□□ 0.01
CNN3-203ENST00000415017 ASB14A6NK59 587 aa15.1■□□□□ 0.01
CNN3-203ENST00000415017 TBX3O15119 743 aa15.1■□□□□ 0.01
CNN3-203ENST00000415017 MAFGO15525 162 aa15.1■□□□□ 0.01
CNN3-203ENST00000415017 EIF3JO75822 258 aaKnown RBP15.1■□□□□ 0.01
CNN3-203ENST00000415017 BAG4O95429 457 aaKnown RBP15.1■□□□□ 0.01
CNN3-203ENST00000415017 ICAM3P32942 547 aa15.1■□□□□ 0.01
CNN3-203ENST00000415017 UBXN2AP68543 259 aa15.1■□□□□ 0.01
CNN3-203ENST00000415017 ATP2C1P98194 919 aaPredicted RBP15.1■□□□□ 0.01
CNN3-203ENST00000415017 SF3A1Q15459 793 aaKnown RBP15.1■□□□□ 0.01
CNN3-203ENST00000415017 LETM2Q2VYF4 491 aa15.1■□□□□ 0.01
CNN3-203ENST00000415017 TMEM87AQ8NBN3 555 aa15.1■□□□□ 0.01
CNN3-203ENST00000415017 CYP2W1Q8TAV3 490 aa15.1■□□□□ 0.01
CNN3-203ENST00000415017 ERO1AQ96HE7 468 aa15.1■□□□□ 0.01
CNN3-203ENST00000415017 JADE2Q9NQC1 790 aa15.1■□□□□ 0.01
CNN3-203ENST00000415017 SLC5A4Q9NY91 659 aa15.1■□□□□ 0.01
CNN3-203ENST00000415017 SYNGAP1Q96PV0 1343 aa15.1■□□□□ 0.01
CNN3-203ENST00000415017 DOCK5Q9H7D0 1870 aa15.1■□□□□ 0.01
CNN3-203ENST00000415017 RBM47A0AV96 593 aaKnown RBP15.09■□□□□ 0.01
CNN3-203ENST00000415017 B4DLN1 442 aa15.09■□□□□ 0.01
CNN3-203ENST00000415017 LAD1O00515 517 aa15.09■□□□□ 0.01
CNN3-203ENST00000415017 SLC37A4O43826 429 aa15.09■□□□□ 0.01
CNN3-203ENST00000415017 CCNT1O60563 726 aaKnown RBP15.09■□□□□ 0.01
CNN3-203ENST00000415017 BMP15O95972 392 aa15.09■□□□□ 0.01
CNN3-203ENST00000415017 CCND2P30279 289 aa15.09■□□□□ 0.01
CNN3-203ENST00000415017 PRPHP41219 470 aa15.09■□□□□ 0.01
CNN3-203ENST00000415017 RGS2P41220 211 aa15.09■□□□□ 0.01
CNN3-203ENST00000415017 KRT85P78386 507 aa15.09■□□□□ 0.01
CNN3-203ENST00000415017 STXBP2Q15833 593 aa15.09■□□□□ 0.01
CNN3-203ENST00000415017 ETNPPLQ8TBG4 499 aa15.09■□□□□ 0.01
CNN3-203ENST00000415017 CD99L2Q8TCZ2 262 aa15.09■□□□□ 0.01
CNN3-203ENST00000415017 HAS1Q92839 578 aa15.09■□□□□ 0.01
CNN3-203ENST00000415017 GPRASP2Q96D09 838 aa15.09■□□□□ 0.01
CNN3-203ENST00000415017 APBA2Q99767 749 aa15.09■□□□□ 0.01
CNN3-203ENST00000415017 TINF2Q9BSI4 451 aa15.09■□□□□ 0.01
CNN3-203ENST00000415017 SCAND2PQ9GZW5 306 aaPredicted RBP15.09■□□□□ 0.01
CNN3-203ENST00000415017 TMEM60Q9H2L4 133 aa15.09■□□□□ 0.01
CNN3-203ENST00000415017 TFIP11Q9UBB9 837 aaKnown RBP15.09■□□□□ 0.01
CNN3-203ENST00000415017 SRRDQ9UH36 339 aa15.09■□□□□ 0.01
CNN3-203ENST00000415017 GABRQQ9UN88 632 aa15.09■□□□□ 0.01
CNN3-203ENST00000415017 ELP1O95163 1332 aa15.09■□□□□ 0.01
CNN3-203ENST00000415017 SPATA31C2B4DYI2 1134 aa15.08■□□□□ 0
CNN3-203ENST00000415017 PPP6R2O75170 966 aa15.08■□□□□ 0
CNN3-203ENST00000415017 SNAI1O95863 264 aaPredicted RBP15.08■□□□□ 0
CNN3-203ENST00000415017 PTGDRQ13258 359 aa15.08■□□□□ 0
CNN3-203ENST00000415017 SEMA3FQ13275 785 aa15.08■□□□□ 0
CNN3-203ENST00000415017 KIF22Q14807 665 aa15.08■□□□□ 0
CNN3-203ENST00000415017 ZNF174Q15697 407 aa15.08■□□□□ 0
CNN3-203ENST00000415017 ARL6IP4Q66PJ3 421 aaKnown RBP15.08■□□□□ 0
CNN3-203ENST00000415017 B3GNT9Q6UX72 402 aa15.08■□□□□ 0
CNN3-203ENST00000415017 DPP9Q86TI2 863 aa15.08■□□□□ 0
CNN3-203ENST00000415017 LEO1Q8WVC0 666 aaPredicted RBP15.08■□□□□ 0
CNN3-203ENST00000415017 BEGAINQ9BUH8 593 aa15.08■□□□□ 0
CNN3-203ENST00000415017 FLRT1Q9NZU1 646 aa15.08■□□□□ 0
CNN3-203ENST00000415017 DDX25Q9UHL0 483 aaKnown RBP15.08■□□□□ 0
CNN3-203ENST00000415017 CNPY2Q9Y2B0 182 aa15.08■□□□□ 0
CNN3-203ENST00000415017 MSH4O15457 936 aa15.07■□□□□ 0
CNN3-203ENST00000415017 DHX15O43143 795 aaKnown RBP15.07■□□□□ 0
CNN3-203ENST00000415017 MCM7P33993 719 aa15.07■□□□□ 0
CNN3-203ENST00000415017 FLT3LGP49771 235 aa15.07■□□□□ 0
CNN3-203ENST00000415017 PRMT2P55345 433 aa15.07■□□□□ 0
CNN3-203ENST00000415017 SETQ01105 290 aaPredicted RBP15.07■□□□□ 0
CNN3-203ENST00000415017 PRKCZQ05513 592 aa15.07■□□□□ 0
CNN3-203ENST00000415017 IL17AQ16552 155 aa15.07■□□□□ 0
CNN3-203ENST00000415017 TAPT1Q6NXT6 567 aa15.07■□□□□ 0
CNN3-203ENST00000415017 ARMCX2Q7L311 632 aa15.07■□□□□ 0
CNN3-203ENST00000415017 SLC5A5Q92911 643 aa15.07■□□□□ 0
CNN3-203ENST00000415017 MPHOSPH6Q99547 160 aaKnown RBP15.07■□□□□ 0
CNN3-203ENST00000415017 WDR11Q9BZH6 1224 aa15.07■□□□□ 0
CNN3-203ENST00000415017 KCNH7Q9NS40 1196 aa15.07■□□□□ 0
CNN3-203ENST00000415017 CEP131Q9UPN4 1083 aa15.07■□□□□ 0
CNN3-203ENST00000415017 DDX49Q9Y6V7 483 aaKnown RBP15.07■□□□□ 0
CNN3-203ENST00000415017 NEMFO60524 1076 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms