RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 PRPF40AO75400 957 aaKnown RBP16.17■□□□□ 0.18
SF3B1-204ENST00000414963 EIF2AK2P19525 551 aaKnown RBP16.17■□□□□ 0.18
SF3B1-204ENST00000414963 PTMSP20962 102 aa16.17■□□□□ 0.18
SF3B1-204ENST00000414963 ADORA2AP29274 412 aa16.17■□□□□ 0.18
SF3B1-204ENST00000414963 CCND2P30279 289 aa16.17■□□□□ 0.18
SF3B1-204ENST00000414963 MRPS9P82933 396 aaKnown RBP16.17■□□□□ 0.18
SF3B1-204ENST00000414963 MORN1Q5T089 497 aa16.17■□□□□ 0.18
SF3B1-204ENST00000414963 ZNF467Q7Z7K2 595 aaPredicted RBP16.17■□□□□ 0.18
SF3B1-204ENST00000414963 IL31RAQ8NI17 732 aa16.17■□□□□ 0.18
SF3B1-204ENST00000414963 MORC4Q8TE76 937 aa16.17■□□□□ 0.18
SF3B1-204ENST00000414963 FERMT2Q96AC1 680 aa16.17■□□□□ 0.18
SF3B1-204ENST00000414963 FGD4Q96M96 766 aa16.17■□□□□ 0.18
SF3B1-204ENST00000414963 MXRA8Q9BRK3 442 aa16.17■□□□□ 0.18
SF3B1-204ENST00000414963 TMEM60Q9H2L4 133 aa16.17■□□□□ 0.18
SF3B1-204ENST00000414963 KCNMB3Q9NPA1 279 aa16.17■□□□□ 0.18
SF3B1-204ENST00000414963 LMBRD1Q9NUN5 540 aa16.17■□□□□ 0.18
SF3B1-204ENST00000414963 SAGE1Q9NXZ1 904 aa16.17■□□□□ 0.18
SF3B1-204ENST00000414963 FBXO2Q9UK22 296 aaPredicted RBP16.17■□□□□ 0.18
SF3B1-204ENST00000414963 SLC37A4O43826 429 aa16.16■□□□□ 0.18
SF3B1-204ENST00000414963 COBLO75128 1261 aa16.16■□□□□ 0.18
SF3B1-204ENST00000414963 ZNF76P36508 570 aa16.16■□□□□ 0.18
SF3B1-204ENST00000414963 ALDH5A1P51649 535 aaPredicted RBP16.16■□□□□ 0.18
SF3B1-204ENST00000414963 UBXN2AP68543 259 aa16.16■□□□□ 0.18
SF3B1-204ENST00000414963 NFKBIBQ15653 356 aa16.16■□□□□ 0.18
SF3B1-204ENST00000414963 AXDND1Q5T1B0 1012 aaPredicted RBP16.16■□□□□ 0.18
SF3B1-204ENST00000414963 KRI1Q8N9T8 703 aaKnown RBP16.16■□□□□ 0.18
SF3B1-204ENST00000414963 ZNF579Q8NAF0 562 aaKnown RBP16.16■□□□□ 0.18
SF3B1-204ENST00000414963 USP6NLQ92738 828 aa16.16■□□□□ 0.18
SF3B1-204ENST00000414963 PCDHA7Q9UN72 937 aa16.16■□□□□ 0.18
SF3B1-204ENST00000414963 A0A1W2PQ27 194 aa16.15■□□□□ 0.18
SF3B1-204ENST00000414963 A0A1W2PQ64 194 aa16.15■□□□□ 0.18
SF3B1-204ENST00000414963 A0A1W2PQD8 194 aa16.15■□□□□ 0.18
SF3B1-204ENST00000414963 MAFGO15525 162 aa16.15■□□□□ 0.18
SF3B1-204ENST00000414963 CUTAO60888 179 aa16.15■□□□□ 0.18
SF3B1-204ENST00000414963 TRPA1O75762 1119 aa16.15■□□□□ 0.18
SF3B1-204ENST00000414963 EIF3JO75822 258 aaKnown RBP16.15■□□□□ 0.18
SF3B1-204ENST00000414963 TBC1D8O95759 1140 aa16.15■□□□□ 0.18
SF3B1-204ENST00000414963 PGK2P07205 417 aa16.15■□□□□ 0.18
SF3B1-204ENST00000414963 HOXC6P09630 235 aa16.15■□□□□ 0.18
SF3B1-204ENST00000414963 OR52Z1P0C646 297 aa16.15■□□□□ 0.18
SF3B1-204ENST00000414963 ITGB5P18084 799 aa16.15■□□□□ 0.18
SF3B1-204ENST00000414963 MARCKSP29966 332 aaPredicted RBP16.15■□□□□ 0.18
SF3B1-204ENST00000414963 ME1P48163 572 aa16.15■□□□□ 0.18
SF3B1-204ENST00000414963 LACTBP83111 547 aaPredicted RBP16.15■□□□□ 0.18
SF3B1-204ENST00000414963 SETQ01105 290 aaPredicted RBP16.15■□□□□ 0.18
SF3B1-204ENST00000414963 CALCRLQ16602 461 aa16.15■□□□□ 0.18
SF3B1-204ENST00000414963 PRR16Q569H4 304 aa16.15■□□□□ 0.18
SF3B1-204ENST00000414963 ADALQ6DHV7 355 aa16.15■□□□□ 0.18
SF3B1-204ENST00000414963 POTEDQ86YR6 584 aa16.15■□□□□ 0.18
SF3B1-204ENST00000414963 CYP2W1Q8TAV3 490 aa16.15■□□□□ 0.18
SF3B1-204ENST00000414963 ETNPPLQ8TBG4 499 aa16.15■□□□□ 0.18
SF3B1-204ENST00000414963 FAM20AQ96MK3 541 aa16.15■□□□□ 0.18
SF3B1-204ENST00000414963 INPP4AQ96PE3 977 aaPredicted RBP16.15■□□□□ 0.18
SF3B1-204ENST00000414963 MPHOSPH6Q99547 160 aaKnown RBP16.15■□□□□ 0.18
SF3B1-204ENST00000414963 JADE2Q9NQC1 790 aa16.15■□□□□ 0.18
SF3B1-204ENST00000414963 GJD2Q9UKL4 321 aa16.15■□□□□ 0.18
SF3B1-204ENST00000414963 MYH7BA7E2Y1 1941 aa16.15■□□□□ 0.18
SF3B1-204ENST00000414963 TCHHQ07283 1943 aa16.14■□□□□ 0.17
SF3B1-204ENST00000414963 UBE2HP62256 183 aa16.14■□□□□ 0.17
SF3B1-204ENST00000414963 STXBP2Q15833 593 aa16.14■□□□□ 0.17
SF3B1-204ENST00000414963 IL17AQ16552 155 aa16.14■□□□□ 0.17
SF3B1-204ENST00000414963 MAMDC4Q6UXC1 1216 aa16.14■□□□□ 0.17
SF3B1-204ENST00000414963 PLA2G4DQ86XP0 818 aa16.14■□□□□ 0.17
SF3B1-204ENST00000414963 SLFN12Q8IYM2 578 aa16.14■□□□□ 0.17
SF3B1-204ENST00000414963 SOCS4Q8WXH5 440 aa16.14■□□□□ 0.17
SF3B1-204ENST00000414963 HAS1Q92839 578 aa16.14■□□□□ 0.17
SF3B1-204ENST00000414963 GPRASP2Q96D09 838 aa16.14■□□□□ 0.17
SF3B1-204ENST00000414963 SLC5A4Q9NY91 659 aa16.14■□□□□ 0.17
SF3B1-204ENST00000414963 MRVI1Q9Y6F6 885 aa16.14■□□□□ 0.17
SF3B1-204ENST00000414963 ZNF236Q9UL36 1845 aa16.14■□□□□ 0.17
SF3B1-204ENST00000414963 ASB14A6NK59 587 aa16.13■□□□□ 0.17
SF3B1-204ENST00000414963 MSH4O15457 936 aa16.13■□□□□ 0.17
SF3B1-204ENST00000414963 GADD45BO75293 160 aaPredicted RBP16.13■□□□□ 0.17
SF3B1-204ENST00000414963 MYCLP12524 364 aaPredicted RBP16.13■□□□□ 0.17
SF3B1-204ENST00000414963 CMA1P23946 247 aa16.13■□□□□ 0.17
SF3B1-204ENST00000414963 CTGFP29279 349 aa16.13■□□□□ 0.17
SF3B1-204ENST00000414963 FXR2P51116 673 aaKnown RBP eCLIP16.13■□□□□ 0.171e-7■■■□□ 16.1
SF3B1-204ENST00000414963 FCGRTP55899 365 aa16.13■□□□□ 0.17
SF3B1-204ENST00000414963 SP3Q02447 781 aa16.13■□□□□ 0.17
SF3B1-204ENST00000414963 MAP2K1Q02750 393 aaPredicted RBP16.13■□□□□ 0.17
SF3B1-204ENST00000414963 MAP2K5Q13163 448 aa16.13■□□□□ 0.17
SF3B1-204ENST00000414963 DTHD1Q6ZMT9 781 aa16.13■□□□□ 0.17
SF3B1-204ENST00000414963 DPP9Q86TI2 863 aa16.13■□□□□ 0.17
SF3B1-204ENST00000414963 MSL3Q8N5Y2 521 aaKnown RBP16.13■□□□□ 0.17
SF3B1-204ENST00000414963 DNAJC5GQ8N7S2 189 aa16.13■□□□□ 0.17
SF3B1-204ENST00000414963 SLC5A5Q92911 643 aa16.13■□□□□ 0.17
SF3B1-204ENST00000414963 LCTP09848 1927 aa16.13■□□□□ 0.17
SF3B1-204ENST00000414963 TNPO2O14787 897 aaKnown RBP16.12■□□□□ 0.17
SF3B1-204ENST00000414963 RGS20O76081 388 aa16.12■□□□□ 0.17
SF3B1-204ENST00000414963 ICAM3P32942 547 aa16.12■□□□□ 0.17
SF3B1-204ENST00000414963 LONP1P36776 959 aaKnown RBP16.12■□□□□ 0.17
SF3B1-204ENST00000414963 PDE4DQ08499 809 aa16.12■□□□□ 0.17
SF3B1-204ENST00000414963 PDIA5Q14554 519 aa16.12■□□□□ 0.17
SF3B1-204ENST00000414963 NLRX1Q86UT6 975 aa16.12■□□□□ 0.17
SF3B1-204ENST00000414963 CDHR1Q96JP9 859 aa16.12■□□□□ 0.17
SF3B1-204ENST00000414963 TRIM47Q96LD4 638 aa16.12■□□□□ 0.17
SF3B1-204ENST00000414963 NUDT12Q9BQG2 462 aa16.12■□□□□ 0.17
SF3B1-204ENST00000414963 WDR11Q9BZH6 1224 aa16.12■□□□□ 0.17
SF3B1-204ENST00000414963 KCNH7Q9NS40 1196 aa16.12■□□□□ 0.17
SF3B1-204ENST00000414963 FAM237AA0A1B0GTK4 181 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms