RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 COA3Q9Y2R0 106 aaPredicted RBP8.34□□□□□ -1.07
ATG4C-204ENST00000414558 SIT1Q9Y3P8 196 aa8.34□□□□□ -1.07
ATG4C-204ENST00000414558 PMF1-BGLAPU3KQ54 211 aa8.34□□□□□ -1.07
ATG4C-204ENST00000414558 X6R8D5 127 aa8.34□□□□□ -1.07
ATG4C-204ENST00000414558 SASH1O94885 1247 aa8.33□□□□□ -1.08
ATG4C-204ENST00000414558 CACNB2Q08289 660 aaPredicted RBP8.33□□□□□ -1.08
ATG4C-204ENST00000414558 DENND5AQ6IQ26 1287 aa8.33□□□□□ -1.08
ATG4C-204ENST00000414558 NLRP10Q86W26 655 aa8.33□□□□□ -1.08
ATG4C-204ENST00000414558 AARSD1Q9BTE6 412 aaKnown RBP8.33□□□□□ -1.08
ATG4C-204ENST00000414558 PPP1R1BQ9UD71 204 aaPredicted RBP8.33□□□□□ -1.08
ATG4C-204ENST00000414558 PCDHA2Q9Y5H9 948 aa8.33□□□□□ -1.08
ATG4C-204ENST00000414558 NPFFR2Q9Y5X5 522 aa8.33□□□□□ -1.08
ATG4C-204ENST00000414558 H7BY64 318 aa8.32□□□□□ -1.08
ATG4C-204ENST00000414558 LSAMPQ13449 338 aa8.32□□□□□ -1.08
ATG4C-204ENST00000414558 VMACQ2NL98 169 aa8.32□□□□□ -1.08
ATG4C-204ENST00000414558 NBPF6Q5VWK0 638 aa8.32□□□□□ -1.08
ATG4C-204ENST00000414558 LRRC47Q8N1G4 583 aaKnown RBP8.32□□□□□ -1.08
ATG4C-204ENST00000414558 FNIP1Q8TF40 1166 aa8.32□□□□□ -1.08
ATG4C-204ENST00000414558 ZNF669Q96BR6 464 aaPredicted RBP8.32□□□□□ -1.08
ATG4C-204ENST00000414558 CHAMP1Q96JM3 812 aa8.32□□□□□ -1.08
ATG4C-204ENST00000414558 NBPF4Q96M43 638 aa8.32□□□□□ -1.08
ATG4C-204ENST00000414558 SGSM2O43147 1006 aa8.31□□□□□ -1.08
ATG4C-204ENST00000414558 PLA2G1BP04054 148 aaKnown RBP8.31□□□□□ -1.08
ATG4C-204ENST00000414558 HTRA3P83110 453 aa8.31□□□□□ -1.08
ATG4C-204ENST00000414558 CHRNA2Q15822 529 aa8.31□□□□□ -1.08
ATG4C-204ENST00000414558 ETV3LQ6ZN32 361 aa8.31□□□□□ -1.08
ATG4C-204ENST00000414558 SMARCC2Q8TAQ2 1214 aa8.31□□□□□ -1.08
ATG4C-204ENST00000414558 LUC7LQ9NQ29 371 aaKnown RBP8.31□□□□□ -1.08
ATG4C-204ENST00000414558 DLX3O60479 287 aa8.3□□□□□ -1.08
ATG4C-204ENST00000414558 FGFR1P11362 822 aa8.3□□□□□ -1.08
ATG4C-204ENST00000414558 LCP1P13796 627 aa8.3□□□□□ -1.08
ATG4C-204ENST00000414558 LCE1DQ5T752 114 aa8.3□□□□□ -1.08
ATG4C-204ENST00000414558 MIB1Q86YT6 1006 aa8.3□□□□□ -1.08
ATG4C-204ENST00000414558 PCDH18Q9HCL0 1135 aa8.3□□□□□ -1.08
ATG4C-204ENST00000414558 GPR27Q9NS67 375 aa8.3□□□□□ -1.08
ATG4C-204ENST00000414558 CLDND1Q9NY35 253 aa8.3□□□□□ -1.08
ATG4C-204ENST00000414558 FBXL7Q9UJT9 491 aa8.3□□□□□ -1.08
ATG4C-204ENST00000414558 PALD1Q9ULE6 856 aa8.3□□□□□ -1.08
ATG4C-204ENST00000414558 MSRB2Q9Y3D2 182 aa8.3□□□□□ -1.08
ATG4C-204ENST00000414558 FFAR3O14843 346 aa8.29□□□□□ -1.08
ATG4C-204ENST00000414558 CYP2C8P10632 490 aa8.29□□□□□ -1.08
ATG4C-204ENST00000414558 HOXA5P20719 270 aa8.29□□□□□ -1.08
ATG4C-204ENST00000414558 VWA3BQ502W6 1294 aa8.29□□□□□ -1.08
ATG4C-204ENST00000414558 LCE4AQ5TA78 99 aa8.29□□□□□ -1.08
ATG4C-204ENST00000414558 LILRA6Q6PI73 481 aa8.29□□□□□ -1.08
ATG4C-204ENST00000414558 RSPO2Q6UXX9 243 aaPredicted RBP8.29□□□□□ -1.08
ATG4C-204ENST00000414558 MILR1Q7Z6M3 343 aa8.29□□□□□ -1.08
ATG4C-204ENST00000414558 SAPCD2Q86UD0 394 aa8.29□□□□□ -1.08
ATG4C-204ENST00000414558 ARHGEF4Q9NR80 690 aa8.29□□□□□ -1.08
ATG4C-204ENST00000414558 TRAV20A0A0B4J274 112 aa8.28□□□□□ -1.08
ATG4C-204ENST00000414558 PRODHO43272 600 aa8.28□□□□□ -1.08
ATG4C-204ENST00000414558 CTSWP56202 376 aa8.28□□□□□ -1.08
ATG4C-204ENST00000414558 USP53Q70EK8 1073 aa8.28□□□□□ -1.08
ATG4C-204ENST00000414558 ZC3H18Q86VM9 953 aaKnown RBP8.28□□□□□ -1.08
ATG4C-204ENST00000414558 TP53I13Q8NBR0 393 aaPredicted RBP8.28□□□□□ -1.08
ATG4C-204ENST00000414558 ARMC5Q96C12 935 aa8.28□□□□□ -1.08
ATG4C-204ENST00000414558 HIRIP3Q9BW71 556 aaPredicted RBP8.28□□□□□ -1.08
ATG4C-204ENST00000414558 EPB41L1Q9H4G0 881 aa8.28□□□□□ -1.08
ATG4C-204ENST00000414558 ZNF652Q9Y2D9 606 aa8.28□□□□□ -1.08
ATG4C-204ENST00000414558 SH3D21A4FU49 640 aa8.27□□□□□ -1.09
ATG4C-204ENST00000414558 HGSO14964 777 aaPredicted RBP8.27□□□□□ -1.09
ATG4C-204ENST00000414558 PDPK1O15530 556 aa8.27□□□□□ -1.09
ATG4C-204ENST00000414558 DGKIO75912 1065 aa8.27□□□□□ -1.09
ATG4C-204ENST00000414558 C8BP07358 591 aa8.27□□□□□ -1.09
ATG4C-204ENST00000414558 PABPC1P11940 636 aaKnown RBP8.27□□□□□ -1.09
ATG4C-204ENST00000414558 NSMFQ6X4W1 530 aa8.27□□□□□ -1.09
ATG4C-204ENST00000414558 DCAF4Q8WV16 495 aa8.27□□□□□ -1.09
ATG4C-204ENST00000414558 DDX11Q96FC9 970 aa8.27□□□□□ -1.09
ATG4C-204ENST00000414558 PHF20Q9BVI0 1012 aa8.27□□□□□ -1.09
ATG4C-204ENST00000414558 GTF2F1P35269 517 aaKnown RBP eCLIP8.26□□□□□ -1.09
ATG4C-204ENST00000414558 RASGRF1Q13972 1273 aa8.26□□□□□ -1.09
ATG4C-204ENST00000414558 STEAP3Q658P3 488 aa8.26□□□□□ -1.09
ATG4C-204ENST00000414558 LIPIQ6XZB0 460 aa8.26□□□□□ -1.09
ATG4C-204ENST00000414558 FAM126BQ8IXS8 530 aa8.26□□□□□ -1.09
ATG4C-204ENST00000414558 OSBP2Q969R2 916 aa8.26□□□□□ -1.09
ATG4C-204ENST00000414558 YIPF4Q9BSR8 244 aa8.26□□□□□ -1.09
ATG4C-204ENST00000414558 SPATA9Q9BWV2 254 aa8.26□□□□□ -1.09
ATG4C-204ENST00000414558 CCDC113Q9H0I3 377 aa8.26□□□□□ -1.09
ATG4C-204ENST00000414558 XYLT2Q9H1B5 865 aa8.26□□□□□ -1.09
ATG4C-204ENST00000414558 NGRNQ9NPE2 291 aaKnown RBP8.26□□□□□ -1.09
ATG4C-204ENST00000414558 SIRPGQ9P1W8 387 aa8.26□□□□□ -1.09
ATG4C-204ENST00000414558 MAFKO60675 156 aa8.25□□□□□ -1.09
ATG4C-204ENST00000414558 KCNC1P48547 511 aa8.25□□□□□ -1.09
ATG4C-204ENST00000414558 SLURP1P55000 103 aa8.25□□□□□ -1.09
ATG4C-204ENST00000414558 IFRD2Q12894 506 aaPredicted RBP8.25□□□□□ -1.09
ATG4C-204ENST00000414558 MTERF2Q49AM1 385 aa8.25□□□□□ -1.09
ATG4C-204ENST00000414558 EMC4Q5J8M3 183 aa8.25□□□□□ -1.09
ATG4C-204ENST00000414558 CD300LDQ6UXZ3 194 aa8.25□□□□□ -1.09
ATG4C-204ENST00000414558 DPH6Q7L8W6 267 aa8.25□□□□□ -1.09
ATG4C-204ENST00000414558 LINC00482Q8N8I6 264 aa8.25□□□□□ -1.09
ATG4C-204ENST00000414558 ZBTB8AQ96BR9 441 aa8.25□□□□□ -1.09
ATG4C-204ENST00000414558 NOX5Q96PH1 765 aa8.25□□□□□ -1.09
ATG4C-204ENST00000414558 ZFYVE21Q9BQ24 234 aa8.25□□□□□ -1.09
ATG4C-204ENST00000414558 PCDHB4Q9Y5E5 795 aa8.25□□□□□ -1.09
ATG4C-204ENST00000414558 DLX2Q07687 328 aaPredicted RBP8.24□□□□□ -1.09
ATG4C-204ENST00000414558 FEZF2Q8TBJ5 459 aa8.24□□□□□ -1.09
ATG4C-204ENST00000414558 ZNF526Q8TF50 670 aaPredicted RBP8.24□□□□□ -1.09
ATG4C-204ENST00000414558 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.24□□□□□ -1.09
ATG4C-204ENST00000414558 RTEL1Q9NZ71 1219 aa8.24□□□□□ -1.09
ATG4C-204ENST00000414558 NTMQ9P121 344 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms