RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 TUBGCP2Q9BSJ2 902 aa18.9■□□□□ 0.62
PHRF1-202ENST00000413872 FEM1BQ9UK73 627 aa18.9■□□□□ 0.62
PHRF1-202ENST00000413872 SRPRBQ9Y5M8 271 aaKnown RBP18.9■□□□□ 0.62
PHRF1-202ENST00000413872 NRKQ7Z2Y5 1582 aa18.9■□□□□ 0.62
PHRF1-202ENST00000413872 CYP2E1P05181 493 aaPredicted RBP18.9■□□□□ 0.62
PHRF1-202ENST00000413872 PPP1R18Q6NYC8 613 aa18.9■□□□□ 0.62
PHRF1-202ENST00000413872 GSDMBQ8TAX9 411 aa18.9■□□□□ 0.62
PHRF1-202ENST00000413872 TRIM31Q9BZY9 425 aa18.9■□□□□ 0.62
PHRF1-202ENST00000413872 RSPH14Q9UHP6 348 aa18.9■□□□□ 0.62
PHRF1-202ENST00000413872 PTPRUQ92729 1446 aa18.9■□□□□ 0.62
PHRF1-202ENST00000413872 UTYO14607 1347 aa18.9■□□□□ 0.62
PHRF1-202ENST00000413872 IKBKBO14920 756 aa18.9■□□□□ 0.62
PHRF1-202ENST00000413872 GMNNO75496 209 aa18.9■□□□□ 0.62
PHRF1-202ENST00000413872 TCP1P17987 556 aaKnown RBP18.9■□□□□ 0.62
PHRF1-202ENST00000413872 LMNB1P20700 586 aa18.9■□□□□ 0.62
PHRF1-202ENST00000413872 PTPREP23469 700 aa18.9■□□□□ 0.62
PHRF1-202ENST00000413872 ZNF658Q5TYW1 1059 aaPredicted RBP18.9■□□□□ 0.62
PHRF1-202ENST00000413872 FAM186BQ8IYM0 893 aa18.9■□□□□ 0.62
PHRF1-202ENST00000413872 GIMAP8Q8ND71 665 aaPredicted RBP18.9■□□□□ 0.62
PHRF1-202ENST00000413872 PLCB1Q9NQ66 1216 aa18.9■□□□□ 0.62
PHRF1-202ENST00000413872 MADDQ8WXG6 1647 aa18.9■□□□□ 0.62
PHRF1-202ENST00000413872 USP17L5A8MUK1 530 aa18.9■□□□□ 0.62
PHRF1-202ENST00000413872 PRDX5P30044 214 aa18.9■□□□□ 0.62
PHRF1-202ENST00000413872 LONRF3Q496Y0 759 aa18.9■□□□□ 0.62
PHRF1-202ENST00000413872 TMTC3Q6ZXV5 915 aa18.9■□□□□ 0.62
PHRF1-202ENST00000413872 P3H4Q92791 437 aa18.9■□□□□ 0.62
PHRF1-202ENST00000413872 RNF207Q6ZRF8 634 aa18.89■□□□□ 0.62
PHRF1-202ENST00000413872 METTL23Q86XA0 190 aa18.89■□□□□ 0.62
PHRF1-202ENST00000413872 CAMSAP1Q5T5Y3 1602 aa18.89■□□□□ 0.62
PHRF1-202ENST00000413872 PHLPP2Q6ZVD8 1323 aa18.89■□□□□ 0.61
PHRF1-202ENST00000413872 ZSCAN20P17040 1043 aaPredicted RBP18.89■□□□□ 0.61
PHRF1-202ENST00000413872 PSMC4P43686 418 aa18.89■□□□□ 0.61
PHRF1-202ENST00000413872 GPR101Q96P66 508 aaPredicted RBP18.89■□□□□ 0.61
PHRF1-202ENST00000413872 PARVGQ9HBI0 331 aa18.89■□□□□ 0.61
PHRF1-202ENST00000413872 JAK3P52333 1124 aa18.89■□□□□ 0.61
PHRF1-202ENST00000413872 CASC4Q6P4E1 433 aa18.89■□□□□ 0.61
PHRF1-202ENST00000413872 MAP7D3Q8IWC1 876 aa18.89■□□□□ 0.61
PHRF1-202ENST00000413872 QRICH2Q9H0J4 1663 aa18.89■□□□□ 0.61
PHRF1-202ENST00000413872 STK36Q9NRP7 1315 aa18.89■□□□□ 0.61
PHRF1-202ENST00000413872 AFPP02771 609 aaKnown RBP18.88■□□□□ 0.61
PHRF1-202ENST00000413872 MAN2A1Q16706 1144 aa18.88■□□□□ 0.61
PHRF1-202ENST00000413872 NFIXQ14938 502 aa18.88■□□□□ 0.61
PHRF1-202ENST00000413872 SCYL2Q6P3W7 929 aa18.88■□□□□ 0.61
PHRF1-202ENST00000413872 PDXDC2PQ6P474 469 aa18.88■□□□□ 0.61
PHRF1-202ENST00000413872 INTS8Q75QN2 995 aaKnown RBP18.88■□□□□ 0.61
PHRF1-202ENST00000413872 SESTD1Q86VW0 696 aa18.88■□□□□ 0.61
PHRF1-202ENST00000413872 PLA2G12BQ9BX93 195 aa18.88■□□□□ 0.61
PHRF1-202ENST00000413872 LRFN2Q9ULH4 789 aa18.88■□□□□ 0.61
PHRF1-202ENST00000413872 ZBTB5O15062 677 aa18.88■□□□□ 0.61
PHRF1-202ENST00000413872 AGLP35573 1532 aa18.88■□□□□ 0.61
PHRF1-202ENST00000413872 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.88■□□□□ 0.61
PHRF1-202ENST00000413872 NR5A1Q13285 461 aa18.88■□□□□ 0.61
PHRF1-202ENST00000413872 FAM167AQ96KS9 214 aa18.88■□□□□ 0.61
PHRF1-202ENST00000413872 CRAMP1Q96RY5 1269 aa18.88■□□□□ 0.61
PHRF1-202ENST00000413872 PPANQ9NQ55 473 aaKnown RBP18.88■□□□□ 0.61
PHRF1-202ENST00000413872 SLC12A2P55011 1212 aa18.87■□□□□ 0.61
PHRF1-202ENST00000413872 ORC2Q13416 577 aaPredicted RBP18.87■□□□□ 0.61
PHRF1-202ENST00000413872 DNAJC21Q5F1R6 531 aaKnown RBP18.87■□□□□ 0.61
PHRF1-202ENST00000413872 TDRD3Q9H7E2 651 aaKnown RBP18.87■□□□□ 0.61
PHRF1-202ENST00000413872 PRKAG2Q9UGJ0 569 aa18.87■□□□□ 0.61
PHRF1-202ENST00000413872 ATP2A3Q93084 1043 aa18.87■□□□□ 0.61
PHRF1-202ENST00000413872 COPB2P35606 906 aa18.87■□□□□ 0.61
PHRF1-202ENST00000413872 ZBTB9Q96C00 473 aa18.87■□□□□ 0.61
PHRF1-202ENST00000413872 OATP04181 439 aa18.87■□□□□ 0.61
PHRF1-202ENST00000413872 PODXL2Q9NZ53 605 aa18.87■□□□□ 0.61
PHRF1-202ENST00000413872 ABCA6Q8N139 1617 aa18.87■□□□□ 0.61
PHRF1-202ENST00000413872 PPP4R3CPQ6ZMV5 832 aa18.87■□□□□ 0.61
PHRF1-202ENST00000413872 PGBD1Q96JS3 809 aa18.87■□□□□ 0.61
PHRF1-202ENST00000413872 CEP152O94986 1710 aa18.86■□□□□ 0.61
PHRF1-202ENST00000413872 SH3BP5O60239 455 aa18.86■□□□□ 0.61
PHRF1-202ENST00000413872 DCP1AQ9NPI6 582 aaPredicted RBP18.86■□□□□ 0.61
PHRF1-202ENST00000413872 TTLL3Q9Y4R7 772 aa18.86■□□□□ 0.61
PHRF1-202ENST00000413872 VIMP08670 466 aaKnown RBP18.86■□□□□ 0.61
PHRF1-202ENST00000413872 EIF2AK2P19525 551 aaKnown RBP18.86■□□□□ 0.61
PHRF1-202ENST00000413872 RCSD1Q6JBY9 416 aa18.86■□□□□ 0.61
PHRF1-202ENST00000413872 TCP11Q8WWU5 503 aa18.86■□□□□ 0.61
PHRF1-202ENST00000413872 PSMB7Q99436 277 aa18.86■□□□□ 0.61
PHRF1-202ENST00000413872 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.86■□□□□ 0.612e-6■■■■■ 34.4
PHRF1-202ENST00000413872 HERC5Q9UII4 1024 aaKnown RBP18.86■□□□□ 0.61
PHRF1-202ENST00000413872 PLA2G4BP0C869 781 aa18.86■□□□□ 0.61
PHRF1-202ENST00000413872 TBC1D10BQ4KMP7 808 aaPredicted RBP18.86■□□□□ 0.61
PHRF1-202ENST00000413872 BBOF1Q8ND07 529 aa18.86■□□□□ 0.61
PHRF1-202ENST00000413872 AFAP1L1Q8TED9 768 aa18.86■□□□□ 0.61
PHRF1-202ENST00000413872 RUNDC3BQ96NL0 473 aa18.86■□□□□ 0.61
PHRF1-202ENST00000413872 TMEM47Q9BQJ4 181 aa18.86■□□□□ 0.61
PHRF1-202ENST00000413872 EPN1Q9Y6I3 576 aaPredicted RBP18.86■□□□□ 0.61
PHRF1-202ENST00000413872 ABCB11O95342 1321 aa18.86■□□□□ 0.61
PHRF1-202ENST00000413872 ZBTB7AO95365 584 aa18.85■□□□□ 0.61
PHRF1-202ENST00000413872 SLFN12LQ6IEE8 588 aa18.85■□□□□ 0.61
PHRF1-202ENST00000413872 WRNIP1Q96S55 665 aa18.85■□□□□ 0.61
PHRF1-202ENST00000413872 APOL6Q9BWW8 343 aa18.85■□□□□ 0.61
PHRF1-202ENST00000413872 DISC1Q9NRI5 854 aa18.85■□□□□ 0.61
PHRF1-202ENST00000413872 PCDHB4Q9Y5E5 795 aa18.85■□□□□ 0.61
PHRF1-202ENST00000413872 IQCA1LA6NCM1 817 aa18.85■□□□□ 0.61
PHRF1-202ENST00000413872 USP17L10C9JJH3 530 aa18.85■□□□□ 0.61
PHRF1-202ENST00000413872 KCNK3O14649 394 aa18.85■□□□□ 0.61
PHRF1-202ENST00000413872 KCNQ2O43526 872 aa18.85■□□□□ 0.61
PHRF1-202ENST00000413872 UBE2SQ16763 222 aa18.85■□□□□ 0.61
PHRF1-202ENST00000413872 MTERF2Q49AM1 385 aa18.85■□□□□ 0.61
PHRF1-202ENST00000413872 GPIHBP1Q8IV16 184 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms