RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 EFCAB14O75071 495 aa11.25□□□□□ -0.61
RFFL-203ENST00000413582 TOP1P11387 765 aaKnown RBP11.25□□□□□ -0.61
RFFL-203ENST00000413582 SSTR3P32745 418 aaPredicted RBP11.25□□□□□ -0.61
RFFL-203ENST00000413582 MRE11P49959 708 aa11.25□□□□□ -0.61
RFFL-203ENST00000413582 ARHGAP1Q07960 439 aa11.25□□□□□ -0.61
RFFL-203ENST00000413582 MKRN4PQ13434 485 aaPredicted RBP11.25□□□□□ -0.61
RFFL-203ENST00000413582 TRIM71Q2Q1W2 868 aaKnown RBP11.25□□□□□ -0.61
RFFL-203ENST00000413582 PTCRAQ6ISU1 281 aaPredicted RBP11.25□□□□□ -0.61
RFFL-203ENST00000413582 TRAF7Q6Q0C0 670 aa11.25□□□□□ -0.61
RFFL-203ENST00000413582 PI4K2BQ8TCG2 481 aa11.25□□□□□ -0.61
RFFL-203ENST00000413582 TMEM47Q9BQJ4 181 aa11.25□□□□□ -0.61
RFFL-203ENST00000413582 C17orf80Q9BSJ5 609 aa11.25□□□□□ -0.61
RFFL-203ENST00000413582 FSD1Q9BTV5 496 aa11.25□□□□□ -0.61
RFFL-203ENST00000413582 GPCPD1Q9NPB8 672 aa11.25□□□□□ -0.61
RFFL-203ENST00000413582 GTF2IRD1Q9UHL9 959 aa11.25□□□□□ -0.61
RFFL-203ENST00000413582 ANAPC4Q9UJX5 808 aa11.25□□□□□ -0.61
RFFL-203ENST00000413582 PNMA2Q9UL42 364 aa11.25□□□□□ -0.61
RFFL-203ENST00000413582 COL4A6Q14031 1691 aa11.24□□□□□ -0.61
RFFL-203ENST00000413582 GRXCR2A6NFK2 248 aa11.24□□□□□ -0.61
RFFL-203ENST00000413582 GH1P01241 217 aa11.24□□□□□ -0.61
RFFL-203ENST00000413582 FGRP09769 529 aa11.24□□□□□ -0.61
RFFL-203ENST00000413582 PDHBP11177 359 aa11.24□□□□□ -0.61
RFFL-203ENST00000413582 ALADP13716 330 aa11.24□□□□□ -0.61
RFFL-203ENST00000413582 NHLH1Q02575 133 aa11.24□□□□□ -0.61
RFFL-203ENST00000413582 MBTPS1Q14703 1052 aa11.24□□□□□ -0.61
RFFL-203ENST00000413582 FAM117BQ6P1L5 589 aa11.24□□□□□ -0.61
RFFL-203ENST00000413582 FBXO22Q8NEZ5 403 aa11.24□□□□□ -0.61
RFFL-203ENST00000413582 NEK9Q8TD19 979 aa11.24□□□□□ -0.61
RFFL-203ENST00000413582 WNT8BQ93098 351 aa11.24□□□□□ -0.61
RFFL-203ENST00000413582 UIMC1Q96RL1 719 aa11.24□□□□□ -0.61
RFFL-203ENST00000413582 DCTPP1Q9H773 170 aa11.24□□□□□ -0.61
RFFL-203ENST00000413582 MYH7BA7E2Y1 1941 aa11.24□□□□□ -0.61
RFFL-203ENST00000413582 MYH6P13533 1939 aa11.24□□□□□ -0.61
RFFL-203ENST00000413582 TTC41PQ6P2S7 1318 aa11.24□□□□□ -0.61
RFFL-203ENST00000413582 RALGAPA2Q2PPJ7 1873 aa11.23□□□□□ -0.61
RFFL-203ENST00000413582 TRIOO75962 3097 aa11.23□□□□□ -0.61
RFFL-203ENST00000413582 TECTAO75443 2155 aa11.23□□□□□ -0.61
RFFL-203ENST00000413582 B4DLN1 442 aa11.23□□□□□ -0.61
RFFL-203ENST00000413582 H3BQ06 376 aaPredicted RBP11.23□□□□□ -0.61
RFFL-203ENST00000413582 DCXO43602 365 aa11.23□□□□□ -0.61
RFFL-203ENST00000413582 SNHG28P0DPA3 235 aa11.23□□□□□ -0.61
RFFL-203ENST00000413582 MRPL12P52815 198 aaKnown RBP11.23□□□□□ -0.61
RFFL-203ENST00000413582 ZNF543Q08ER8 600 aa11.23□□□□□ -0.61
RFFL-203ENST00000413582 IKBKEQ14164 716 aa11.23□□□□□ -0.61
RFFL-203ENST00000413582 LY6KQ17RY6 165 aa11.23□□□□□ -0.61
RFFL-203ENST00000413582 C20orf194Q5TEA3 1177 aa11.23□□□□□ -0.61
RFFL-203ENST00000413582 VPS53Q5VIR6 699 aa11.23□□□□□ -0.61
RFFL-203ENST00000413582 SP7Q8TDD2 431 aaPredicted RBP11.23□□□□□ -0.61
RFFL-203ENST00000413582 OTUD7AQ8TE49 926 aaPredicted RBP11.23□□□□□ -0.61
RFFL-203ENST00000413582 MRPL38Q96DV4 380 aaKnown RBP11.23□□□□□ -0.61
RFFL-203ENST00000413582 CRBNQ96SW2 442 aa11.23□□□□□ -0.61
RFFL-203ENST00000413582 HDAC6Q9UBN7 1215 aa11.23□□□□□ -0.61
RFFL-203ENST00000413582 SUPT16HQ9Y5B9 1047 aaKnown RBP11.23□□□□□ -0.61
RFFL-203ENST00000413582 POTEB3A0JP26 581 aa11.22□□□□□ -0.61
RFFL-203ENST00000413582 HAS3O00219 553 aa11.22□□□□□ -0.61
RFFL-203ENST00000413582 LGR5O75473 907 aa11.22□□□□□ -0.61
RFFL-203ENST00000413582 F2P00734 622 aa11.22□□□□□ -0.61
RFFL-203ENST00000413582 ZNF286BP0CG31 522 aa11.22□□□□□ -0.61
RFFL-203ENST00000413582 CASTP20810 708 aaKnown RBP11.22□□□□□ -0.61
RFFL-203ENST00000413582 PSEN2P49810 448 aa11.22□□□□□ -0.61
RFFL-203ENST00000413582 HTRA4P83105 476 aaPredicted RBP11.22□□□□□ -0.61
RFFL-203ENST00000413582 ZP2Q05996 745 aa11.22□□□□□ -0.61
RFFL-203ENST00000413582 PTK7Q13308 1070 aa11.22□□□□□ -0.61
RFFL-203ENST00000413582 COL19A1Q14993 1142 aa11.22□□□□□ -0.61
RFFL-203ENST00000413582 DGKDQ16760 1214 aa11.22□□□□□ -0.61
RFFL-203ENST00000413582 CSPP1Q1MSJ5 1256 aa11.22□□□□□ -0.61
RFFL-203ENST00000413582 PUS10Q3MIT2 529 aaKnown RBP11.22□□□□□ -0.61
RFFL-203ENST00000413582 USH1GQ495M9 461 aa11.22□□□□□ -0.61
RFFL-203ENST00000413582 TIGD5Q53EQ6 642 aa11.22□□□□□ -0.61
RFFL-203ENST00000413582 ZNF618Q5T7W0 954 aa11.22□□□□□ -0.61
RFFL-203ENST00000413582 POTEBQ6S5H4 581 aa11.22□□□□□ -0.61
RFFL-203ENST00000413582 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.22□□□□□ -0.61
RFFL-203ENST00000413582 SEPT14Q6ZU15 432 aa11.22□□□□□ -0.61
RFFL-203ENST00000413582 CHST3Q7LGC8 479 aa11.22□□□□□ -0.61
RFFL-203ENST00000413582 C7orf31Q8N865 590 aa11.22□□□□□ -0.61
RFFL-203ENST00000413582 RGS22Q8NE09 1264 aa11.22□□□□□ -0.61
RFFL-203ENST00000413582 EMID1Q96A84 441 aaPredicted RBP11.22□□□□□ -0.61
RFFL-203ENST00000413582 FBXL18Q96ME1 805 aa11.22□□□□□ -0.61
RFFL-203ENST00000413582 KCNH6Q9H252 994 aa11.22□□□□□ -0.61
RFFL-203ENST00000413582 ZDBF2Q9HCK1 2354 aa11.22□□□□□ -0.61
RFFL-203ENST00000413582 TCP11L1Q9NUJ3 509 aa11.22□□□□□ -0.61
RFFL-203ENST00000413582 COL20A1Q9P218 1284 aa11.22□□□□□ -0.61
RFFL-203ENST00000413582 INSL6Q9Y581 213 aa11.22□□□□□ -0.61
RFFL-203ENST00000413582 C5orf42Q9H799 3197 aa11.22□□□□□ -0.61
RFFL-203ENST00000413582 CACNA1HO95180 2353 aa11.21□□□□□ -0.61
RFFL-203ENST00000413582 RRP1P56182 461 aaKnown RBP11.21□□□□□ -0.61
RFFL-203ENST00000413582 ZNF200P98182 395 aaPredicted RBP11.21□□□□□ -0.61
RFFL-203ENST00000413582 HIC1Q14526 733 aa11.21□□□□□ -0.61
RFFL-203ENST00000413582 MFSD10Q14728 455 aa11.21□□□□□ -0.61
RFFL-203ENST00000413582 ALX1Q15699 326 aa11.21□□□□□ -0.61
RFFL-203ENST00000413582 PTPROQ16827 1216 aa11.21□□□□□ -0.61
RFFL-203ENST00000413582 KIAA0753Q2KHM9 967 aa11.21□□□□□ -0.61
RFFL-203ENST00000413582 EPC2Q52LR7 807 aa11.21□□□□□ -0.61
RFFL-203ENST00000413582 RRP12Q5JTH9 1297 aaKnown RBP11.21□□□□□ -0.61
RFFL-203ENST00000413582 ERICH6BQ5W0A0 696 aa11.21□□□□□ -0.61
RFFL-203ENST00000413582 MYOCDQ8IZQ8 938 aa11.21□□□□□ -0.61
RFFL-203ENST00000413582 PPTC7Q8NI37 304 aa11.21□□□□□ -0.61
RFFL-203ENST00000413582 SYTL5Q8TDW5 730 aaPredicted RBP11.21□□□□□ -0.61
RFFL-203ENST00000413582 ALG1Q9BT22 464 aa11.21□□□□□ -0.61
RFFL-203ENST00000413582 KATNAL1Q9BW62 490 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms