RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 HIBADHP31937 336 aaKnown RBP19.49■□□□□ 0.71
SDCBP-202ENST00000413219 ATP6V1AP38606 617 aa19.49■□□□□ 0.71
SDCBP-202ENST00000413219 USP8P40818 1118 aa19.49■□□□□ 0.71
SDCBP-202ENST00000413219 NAPAP54920 295 aa19.49■□□□□ 0.71
SDCBP-202ENST00000413219 PSMD2Q13200 908 aa19.49■□□□□ 0.71
SDCBP-202ENST00000413219 HGSNATQ68CP4 663 aa19.49■□□□□ 0.71
SDCBP-202ENST00000413219 CLEC4GQ6UXB4 293 aa19.49■□□□□ 0.71
SDCBP-202ENST00000413219 LRRC55Q6ZSA7 311 aa19.49■□□□□ 0.71
SDCBP-202ENST00000413219 PROM2Q8N271 834 aa19.49■□□□□ 0.71
SDCBP-202ENST00000413219 SMARCAL1Q9NZC9 954 aa19.49■□□□□ 0.71
SDCBP-202ENST00000413219 EHD2Q9NZN4 543 aa19.49■□□□□ 0.71
SDCBP-202ENST00000413219 DOT1LQ8TEK3 1739 aa19.49■□□□□ 0.71
SDCBP-202ENST00000413219 NDUFAB1O14561 156 aa19.48■□□□□ 0.71
SDCBP-202ENST00000413219 PRDX5P30044 214 aa19.48■□□□□ 0.71
SDCBP-202ENST00000413219 TECP42680 631 aa19.48■□□□□ 0.71
SDCBP-202ENST00000413219 GRB10Q13322 594 aa19.48■□□□□ 0.71
SDCBP-202ENST00000413219 SPTY2D1Q68D10 685 aaPredicted RBP19.48■□□□□ 0.71
SDCBP-202ENST00000413219 CACNA2D4Q7Z3S7 1137 aa19.48■□□□□ 0.71
SDCBP-202ENST00000413219 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.48■□□□□ 0.714e-7■□□□□ 10.7
SDCBP-202ENST00000413219 LRRC27Q9C0I9 530 aa19.48■□□□□ 0.71
SDCBP-202ENST00000413219 BLOC1S4Q9NUP1 217 aa19.48■□□□□ 0.71
SDCBP-202ENST00000413219 MYMKA6NI61 221 aa19.48■□□□□ 0.71
SDCBP-202ENST00000413219 SLC1A4P43007 532 aa19.48■□□□□ 0.71
SDCBP-202ENST00000413219 RASSF7Q02833 373 aa19.48■□□□□ 0.71
SDCBP-202ENST00000413219 PDE4CQ08493 712 aa19.48■□□□□ 0.71
SDCBP-202ENST00000413219 ERFEQ4G0M1 354 aa19.48■□□□□ 0.71
SDCBP-202ENST00000413219 C3orf67Q6ZVT6 689 aa19.48■□□□□ 0.71
SDCBP-202ENST00000413219 WHAMMQ8TF30 809 aa19.48■□□□□ 0.71
SDCBP-202ENST00000413219 KAT2BQ92831 832 aa19.48■□□□□ 0.71
SDCBP-202ENST00000413219 HPS3Q969F9 1004 aa19.48■□□□□ 0.71
SDCBP-202ENST00000413219 PSMB7Q99436 277 aa19.48■□□□□ 0.71
SDCBP-202ENST00000413219 TSG101Q99816 390 aa19.48■□□□□ 0.71
SDCBP-202ENST00000413219 MKNK2Q9HBH9 465 aa19.48■□□□□ 0.71
SDCBP-202ENST00000413219 CEP72Q9P209 647 aa19.48■□□□□ 0.71
SDCBP-202ENST00000413219 SERPING1P05155 500 aa19.47■□□□□ 0.71
SDCBP-202ENST00000413219 TSPY3P0CV98 308 aa19.47■□□□□ 0.71
SDCBP-202ENST00000413219 TSPY8P0CW00 308 aa19.47■□□□□ 0.71
SDCBP-202ENST00000413219 IRX3P78415 501 aaPredicted RBP19.47■□□□□ 0.71
SDCBP-202ENST00000413219 MRPS25P82663 173 aaKnown RBP19.47■□□□□ 0.71
SDCBP-202ENST00000413219 GFPT1Q06210 699 aaPredicted RBP19.47■□□□□ 0.71
SDCBP-202ENST00000413219 PDCLQ13371 301 aa19.47■□□□□ 0.71
SDCBP-202ENST00000413219 SLC9C1Q4G0N8 1177 aa19.47■□□□□ 0.71
SDCBP-202ENST00000413219 MICALCLQ6ZW33 695 aa19.47■□□□□ 0.71
SDCBP-202ENST00000413219 CNPY4Q8N129 248 aa19.47■□□□□ 0.71
SDCBP-202ENST00000413219 EIF1ADQ8N9N8 165 aaKnown RBP19.47■□□□□ 0.71
SDCBP-202ENST00000413219 CCDC43Q96MW1 224 aaKnown RBP19.47■□□□□ 0.71
SDCBP-202ENST00000413219 SMCO2A6NFE2 343 aa19.47■□□□□ 0.71
SDCBP-202ENST00000413219 KLRF2D3W0D1 207 aa19.47■□□□□ 0.71
SDCBP-202ENST00000413219 HEXIM1O94992 359 aaKnown RBP19.47■□□□□ 0.71
SDCBP-202ENST00000413219 GLI1P08151 1106 aa19.47■□□□□ 0.71
SDCBP-202ENST00000413219 SMARCA1P28370 1054 aa19.47■□□□□ 0.71
SDCBP-202ENST00000413219 CARSP49589 748 aaKnown RBP19.47■□□□□ 0.71
SDCBP-202ENST00000413219 FXR2P51116 673 aaKnown RBP eCLIP19.47■□□□□ 0.71
SDCBP-202ENST00000413219 NAB2Q15742 525 aa19.47■□□□□ 0.71
SDCBP-202ENST00000413219 LARP4BQ92615 738 aaKnown RBP19.47■□□□□ 0.71
SDCBP-202ENST00000413219 TMEM47Q9BQJ4 181 aa19.47■□□□□ 0.71
SDCBP-202ENST00000413219 EPN3Q9H201 632 aa19.47■□□□□ 0.71
SDCBP-202ENST00000413219 LOC102724428A0A0B4J2F2 783 aa19.46■□□□□ 0.71
SDCBP-202ENST00000413219 ESYT2A0FGR8 921 aa19.46■□□□□ 0.71
SDCBP-202ENST00000413219 USP17L3A6NCW0 530 aa19.46■□□□□ 0.71
SDCBP-202ENST00000413219 USP17L4A6NCW7 530 aa19.46■□□□□ 0.71
SDCBP-202ENST00000413219 ZNF233A6NK53 670 aa19.46■□□□□ 0.71
SDCBP-202ENST00000413219 SIK1P57059 783 aa19.46■□□□□ 0.71
SDCBP-202ENST00000413219 EHHADHQ08426 723 aa19.46■□□□□ 0.71
SDCBP-202ENST00000413219 USP17L1Q7RTZ2 530 aa19.46■□□□□ 0.71
SDCBP-202ENST00000413219 YTHDF3Q7Z739 585 aaKnown RBP19.46■□□□□ 0.71
SDCBP-202ENST00000413219 MTMR9Q96QG7 549 aa19.46■□□□□ 0.71
SDCBP-202ENST00000413219 ANKRD2Q9GZV1 360 aa19.46■□□□□ 0.71
SDCBP-202ENST00000413219 EPB41L5Q9HCM4 733 aa19.46■□□□□ 0.71
SDCBP-202ENST00000413219 GEMIN8Q9NWZ8 242 aaKnown RBP19.46■□□□□ 0.71
SDCBP-202ENST00000413219 GGA2Q9UJY4 613 aa19.46■□□□□ 0.71
SDCBP-202ENST00000413219 NFU1Q9UMS0 254 aa19.46■□□□□ 0.71
SDCBP-202ENST00000413219 CCDC88AQ3V6T2 1871 aa19.46■□□□□ 0.71
SDCBP-202ENST00000413219 CES2O00748 559 aa19.45■□□□□ 0.7
SDCBP-202ENST00000413219 KIAA0754O94854 1291 aa19.45■□□□□ 0.7
SDCBP-202ENST00000413219 FSBPO95073 299 aa19.45■□□□□ 0.7
SDCBP-202ENST00000413219 KLRK1P26718 216 aa19.45■□□□□ 0.7
SDCBP-202ENST00000413219 SOGA3Q5TF21 947 aa19.45■□□□□ 0.7
SDCBP-202ENST00000413219 ZNF444Q8N0Y2 327 aaPredicted RBP19.45■□□□□ 0.7
SDCBP-202ENST00000413219 ANKRD13CQ8N6S4 541 aa19.45■□□□□ 0.7
SDCBP-202ENST00000413219 CELF1Q92879 486 aaKnown RBP19.45■□□□□ 0.7
SDCBP-202ENST00000413219 DYNLL2Q96FJ2 89 aa19.45■□□□□ 0.7
SDCBP-202ENST00000413219 MS4A14Q96JA4 679 aa19.45■□□□□ 0.7
SDCBP-202ENST00000413219 PNMA5Q96PV4 448 aa19.45■□□□□ 0.7
SDCBP-202ENST00000413219 PCDHGC5Q9Y5F6 944 aa19.45■□□□□ 0.7
SDCBP-202ENST00000413219 HMGB1P1B2RPK0 211 aaPredicted RBP19.45■□□□□ 0.7
SDCBP-202ENST00000413219 MEFVO15553 781 aaPredicted RBP19.45■□□□□ 0.7
SDCBP-202ENST00000413219 BUB1O43683 1085 aa19.45■□□□□ 0.7
SDCBP-202ENST00000413219 HNRNPH1P31943 449 aaKnown RBP19.45■□□□□ 0.7
SDCBP-202ENST00000413219 LSP1P33241 339 aa19.45■□□□□ 0.7
SDCBP-202ENST00000413219 GUCY2DQ02846 1103 aa19.45■□□□□ 0.7
SDCBP-202ENST00000413219 KCNMA1Q12791 1236 aa19.45■□□□□ 0.7
SDCBP-202ENST00000413219 ITPK1Q13572 414 aa19.45■□□□□ 0.7
SDCBP-202ENST00000413219 CDC37Q16543 378 aaPredicted RBP19.45■□□□□ 0.7
SDCBP-202ENST00000413219 TDRD12Q587J7 1177 aaKnown RBP19.45■□□□□ 0.7
SDCBP-202ENST00000413219 SLC10A5Q5PT55 438 aa19.45■□□□□ 0.7
SDCBP-202ENST00000413219 SFMBT2Q5VUG0 894 aa19.45■□□□□ 0.7
SDCBP-202ENST00000413219 TTC19Q6DKK2 380 aaPredicted RBP19.45■□□□□ 0.7
SDCBP-202ENST00000413219 DZIP1Q86YF9 867 aaKnown RBP19.45■□□□□ 0.7
SDCBP-202ENST00000413219 PRPF38AQ8NAV1 312 aaKnown RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms