RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 CC2D1AQ6P1N0 951 aaPredicted RBP12.78□□□□□ -0.36
TRAFD1-202ENST00000412615 KIAA0825Q8IV33 1275 aa12.78□□□□□ -0.36
TRAFD1-202ENST00000412615 TSG101Q99816 390 aa12.78□□□□□ -0.36
TRAFD1-202ENST00000412615 IDI2Q9BXS1 227 aa12.78□□□□□ -0.36
TRAFD1-202ENST00000412615 ZSWIM4Q9H7M6 989 aa12.78□□□□□ -0.36
TRAFD1-202ENST00000412615 DNAJC18Q9H819 358 aa12.78□□□□□ -0.36
TRAFD1-202ENST00000412615 KDM3AQ9Y4C1 1321 aa12.78□□□□□ -0.36
TRAFD1-202ENST00000412615 PLSCR1O15162 318 aa12.78□□□□□ -0.36
TRAFD1-202ENST00000412615 RBM5P52756 815 aaKnown RBP eCLIP12.78□□□□□ -0.36
TRAFD1-202ENST00000412615 CDK17Q00537 523 aa12.78□□□□□ -0.36
TRAFD1-202ENST00000412615 EHHADHQ08426 723 aa12.78□□□□□ -0.36
TRAFD1-202ENST00000412615 TCP10Q12799 353 aa12.78□□□□□ -0.36
TRAFD1-202ENST00000412615 QRICH1Q2TAL8 776 aa12.78□□□□□ -0.36
TRAFD1-202ENST00000412615 HYIQ5T013 277 aa12.78□□□□□ -0.36
TRAFD1-202ENST00000412615 CCDC122Q5T0U0 273 aa12.78□□□□□ -0.36
TRAFD1-202ENST00000412615 SLFN13Q68D06 897 aa12.78□□□□□ -0.36
TRAFD1-202ENST00000412615 KCNK18Q7Z418 384 aa12.78□□□□□ -0.36
TRAFD1-202ENST00000412615 EHBP1Q8NDI1 1231 aa12.78□□□□□ -0.36
TRAFD1-202ENST00000412615 PCDHA1Q9Y5I3 950 aa12.78□□□□□ -0.36
TRAFD1-202ENST00000412615 NRXN2Q9P2S2 1712 aa12.78□□□□□ -0.36
TRAFD1-202ENST00000412615 EIF3CLB5ME19 914 aaKnown RBP12.77□□□□□ -0.36
TRAFD1-202ENST00000412615 PSMD14O00487 310 aa12.77□□□□□ -0.36
TRAFD1-202ENST00000412615 SLC26A4O43511 780 aa12.77□□□□□ -0.36
TRAFD1-202ENST00000412615 KRT86O43790 486 aa12.77□□□□□ -0.36
TRAFD1-202ENST00000412615 RAD21O60216 631 aa12.77□□□□□ -0.36
TRAFD1-202ENST00000412615 NPM3O75607 178 aaKnown RBP12.77□□□□□ -0.36
TRAFD1-202ENST00000412615 KLK7P49862 253 aa12.77□□□□□ -0.36
TRAFD1-202ENST00000412615 HERVK_113P62684 666 aa12.77□□□□□ -0.36
TRAFD1-202ENST00000412615 PDE4CQ08493 712 aa12.77□□□□□ -0.36
TRAFD1-202ENST00000412615 BRD3Q15059 726 aa12.77□□□□□ -0.36
TRAFD1-202ENST00000412615 MAN2A1Q16706 1144 aa12.77□□□□□ -0.36
TRAFD1-202ENST00000412615 KIAA1328Q86T90 577 aa12.77□□□□□ -0.36
TRAFD1-202ENST00000412615 CCDC84Q86UT8 332 aaPredicted RBP12.77□□□□□ -0.36
TRAFD1-202ENST00000412615 EIF3CQ99613 913 aaKnown RBP12.77□□□□□ -0.36
TRAFD1-202ENST00000412615 NDST4Q9H3R1 872 aa12.77□□□□□ -0.36
TRAFD1-202ENST00000412615 NHEJ1Q9H9Q4 299 aaPredicted RBP12.77□□□□□ -0.36
TRAFD1-202ENST00000412615 MYO6Q9UM54 1294 aa12.77□□□□□ -0.36
TRAFD1-202ENST00000412615 CTAGE15A4D2H0 777 aa12.77□□□□□ -0.37
TRAFD1-202ENST00000412615 CCDC151A5D8V7 595 aa12.77□□□□□ -0.37
TRAFD1-202ENST00000412615 DDTLA6NHG4 134 aaPredicted RBP12.77□□□□□ -0.37
TRAFD1-202ENST00000412615 CTAGE8P0CG41 777 aa12.77□□□□□ -0.37
TRAFD1-202ENST00000412615 MCTP2Q6DN12 878 aa12.77□□□□□ -0.37
TRAFD1-202ENST00000412615 CTAGE6Q86UF2 777 aa12.77□□□□□ -0.37
TRAFD1-202ENST00000412615 CTAGE4Q8IX94 777 aa12.77□□□□□ -0.37
TRAFD1-202ENST00000412615 KCNQ5Q9NR82 932 aa12.77□□□□□ -0.37
TRAFD1-202ENST00000412615 USP17L15C9J2P7 530 aa12.76□□□□□ -0.37
TRAFD1-202ENST00000412615 USP17L13C9JLJ4 530 aa12.76□□□□□ -0.37
TRAFD1-202ENST00000412615 USP17L11C9JVI0 530 aa12.76□□□□□ -0.37
TRAFD1-202ENST00000412615 USP17L18D6R9N7 530 aa12.76□□□□□ -0.37
TRAFD1-202ENST00000412615 USP17L22D6RA61 530 aa12.76□□□□□ -0.37
TRAFD1-202ENST00000412615 USP17L17D6RBQ6 530 aa12.76□□□□□ -0.37
TRAFD1-202ENST00000412615 USP17L19D6RCP7 530 aa12.76□□□□□ -0.37
TRAFD1-202ENST00000412615 USP17L20D6RJB6 530 aa12.76□□□□□ -0.37
TRAFD1-202ENST00000412615 SEC31AO94979 1220 aaKnown RBP12.76□□□□□ -0.37
TRAFD1-202ENST00000412615 SLURP2P0DP57 97 aa12.76□□□□□ -0.37
TRAFD1-202ENST00000412615 CACNB3P54284 484 aa12.76□□□□□ -0.37
TRAFD1-202ENST00000412615 USP17L24Q0WX57 530 aa12.76□□□□□ -0.37
TRAFD1-202ENST00000412615 CDC37Q16543 378 aaPredicted RBP12.76□□□□□ -0.37
TRAFD1-202ENST00000412615 ECM1Q16610 540 aa12.76□□□□□ -0.37
TRAFD1-202ENST00000412615 DACT2Q5SW24 774 aa12.76□□□□□ -0.37
TRAFD1-202ENST00000412615 TATDN1Q6P1N9 297 aa12.76□□□□□ -0.37
TRAFD1-202ENST00000412615 USP17L6PQ6QN14 398 aa12.76□□□□□ -0.37
TRAFD1-202ENST00000412615 MYOCDQ8IZQ8 938 aa12.76□□□□□ -0.37
TRAFD1-202ENST00000412615 FAM198AQ9UFP1 575 aa12.76□□□□□ -0.37
TRAFD1-202ENST00000412615 GREB1LQ9C091 1923 aaPredicted RBP12.76□□□□□ -0.37
TRAFD1-202ENST00000412615 CYP3A7-CYP3A51PA0A087WV96 503 aa12.76□□□□□ -0.37
TRAFD1-202ENST00000412615 CYP3A7P24462 503 aa12.76□□□□□ -0.37
TRAFD1-202ENST00000412615 HNRNPH3P31942 346 aaKnown RBP12.76□□□□□ -0.37
TRAFD1-202ENST00000412615 PLA2G4AP47712 749 aa12.76□□□□□ -0.37
TRAFD1-202ENST00000412615 AMPD2Q01433 879 aa12.76□□□□□ -0.37
TRAFD1-202ENST00000412615 AP3B2Q13367 1082 aa12.76□□□□□ -0.37
TRAFD1-202ENST00000412615 TMEM179Q6ZVK1 233 aa12.76□□□□□ -0.37
TRAFD1-202ENST00000412615 C2CD5Q86YS7 1000 aa12.76□□□□□ -0.37
TRAFD1-202ENST00000412615 SLFN12Q8IYM2 578 aa12.76□□□□□ -0.37
TRAFD1-202ENST00000412615 MSANTD4Q8NCY6 345 aa12.76□□□□□ -0.37
TRAFD1-202ENST00000412615 JAKMIP2Q96AA8 810 aa12.76□□□□□ -0.37
TRAFD1-202ENST00000412615 DNAJC19Q96DA6 116 aa12.76□□□□□ -0.37
TRAFD1-202ENST00000412615 TRIM10Q9UDY6 481 aa12.76□□□□□ -0.37
TRAFD1-202ENST00000412615 FAM196BA6NMK8 535 aa12.75□□□□□ -0.37
TRAFD1-202ENST00000412615 TBC1D8O95759 1140 aa12.75□□□□□ -0.37
TRAFD1-202ENST00000412615 COASYQ13057 564 aa12.75□□□□□ -0.37
TRAFD1-202ENST00000412615 MOXD1Q6UVY6 613 aa12.75□□□□□ -0.37
TRAFD1-202ENST00000412615 CCDC42Q96M95 316 aa12.75□□□□□ -0.37
TRAFD1-202ENST00000412615 ANO3Q9BYT9 981 aa12.75□□□□□ -0.37
TRAFD1-202ENST00000412615 KCNMB3Q9NPA1 279 aa12.75□□□□□ -0.37
TRAFD1-202ENST00000412615 PANK4Q9NVE7 773 aa12.75□□□□□ -0.37
TRAFD1-202ENST00000412615 SERPINA10Q9UK55 444 aa12.75□□□□□ -0.37
TRAFD1-202ENST00000412615 PLAGL2Q9UPG8 496 aa12.75□□□□□ -0.37
TRAFD1-202ENST00000412615 SIK3Q9Y2K2 1263 aa12.75□□□□□ -0.37
TRAFD1-202ENST00000412615 H0YIN7 160 aa12.75□□□□□ -0.37
TRAFD1-202ENST00000412615 ECE2O60344 883 aa12.75□□□□□ -0.37
TRAFD1-202ENST00000412615 SSBP05455 408 aaKnown RBP eCLIP12.75□□□□□ -0.37
TRAFD1-202ENST00000412615 TUBBP07437 444 aa12.75□□□□□ -0.37
TRAFD1-202ENST00000412615 FAM193AP78312 1265 aa12.75□□□□□ -0.37
TRAFD1-202ENST00000412615 FKBP3Q00688 224 aaKnown RBP12.75□□□□□ -0.37
TRAFD1-202ENST00000412615 ICA1Q05084 483 aa12.75□□□□□ -0.37
TRAFD1-202ENST00000412615 LRRC41Q15345 812 aa12.75□□□□□ -0.37
TRAFD1-202ENST00000412615 SPA17Q15506 151 aa12.75□□□□□ -0.37
TRAFD1-202ENST00000412615 TERF2Q15554 542 aa12.75□□□□□ -0.37
TRAFD1-202ENST00000412615 FAM26FQ5R3K3 315 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms