RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 APOBRQ0VD83 1088 aa20.08■□□□□ 0.81
HSPG2-204ENST00000412328 TOB2Q14106 344 aaPredicted RBP20.08■□□□□ 0.81
HSPG2-204ENST00000412328 TTLL4Q14679 1199 aa20.08■□□□□ 0.81
HSPG2-204ENST00000412328 WWC2Q6AWC2 1192 aa20.08■□□□□ 0.81
HSPG2-204ENST00000412328 NOL8Q76FK4 1167 aaKnown RBP20.08■□□□□ 0.81
HSPG2-204ENST00000412328 VSIG10LQ86VR7 867 aa20.08■□□□□ 0.81
HSPG2-204ENST00000412328 OR6J1Q8NGC5 347 aa20.08■□□□□ 0.81
HSPG2-204ENST00000412328 BRF1Q92994 677 aa20.08■□□□□ 0.81
HSPG2-204ENST00000412328 ZSWIM6Q9HCJ5 1215 aa20.08■□□□□ 0.81
HSPG2-204ENST00000412328 SEC63Q9UGP8 760 aaKnown RBP20.08■□□□□ 0.81
HSPG2-204ENST00000412328 GOLGA8AA7E2F4 631 aa20.07■□□□□ 0.8
HSPG2-204ENST00000412328 GOLGA8BA8MQT2 603 aa20.07■□□□□ 0.8
HSPG2-204ENST00000412328 ARVCFO00192 962 aa20.07■□□□□ 0.8
HSPG2-204ENST00000412328 EIF3JO75822 258 aaKnown RBP20.07■□□□□ 0.8
HSPG2-204ENST00000412328 CASTP20810 708 aaKnown RBP20.07■□□□□ 0.8
HSPG2-204ENST00000412328 MRPS9P82933 396 aaKnown RBP20.07■□□□□ 0.8
HSPG2-204ENST00000412328 MDM2Q00987 491 aaPredicted RBP20.07■□□□□ 0.8
HSPG2-204ENST00000412328 USP17L6PQ6QN14 398 aa20.07■□□□□ 0.8
HSPG2-204ENST00000412328 CCDC82Q8N4S0 544 aa20.07■□□□□ 0.8
HSPG2-204ENST00000412328 GPKOWQ92917 476 aaPredicted RBP eCLIP20.07■□□□□ 0.8
HSPG2-204ENST00000412328 IL17RAQ96F46 866 aa20.07■□□□□ 0.8
HSPG2-204ENST00000412328 DDX41Q9UJV9 622 aaKnown RBP20.07■□□□□ 0.8
HSPG2-204ENST00000412328 MROH7Q68CQ1 1323 aa20.06■□□□□ 0.8
HSPG2-204ENST00000412328 PTPRSQ13332 1948 aa20.06■□□□□ 0.8
HSPG2-204ENST00000412328 SOX1O00570 391 aaPredicted RBP20.06■□□□□ 0.8
HSPG2-204ENST00000412328 CABYRO75952 493 aa20.06■□□□□ 0.8
HSPG2-204ENST00000412328 CPT1AP50416 773 aa20.06■□□□□ 0.8
HSPG2-204ENST00000412328 SEMA3FQ13275 785 aa20.06■□□□□ 0.8
HSPG2-204ENST00000412328 LY6KQ17RY6 165 aa20.06■□□□□ 0.8
HSPG2-204ENST00000412328 SEPT14Q6ZU15 432 aa20.06■□□□□ 0.8
HSPG2-204ENST00000412328 FCHSD1Q86WN1 690 aa20.06■□□□□ 0.8
HSPG2-204ENST00000412328 EMID1Q96A84 441 aaPredicted RBP20.06■□□□□ 0.8
HSPG2-204ENST00000412328 TM6SF1Q9BZW5 370 aa20.06■□□□□ 0.8
HSPG2-204ENST00000412328 PRDM5Q9NQX1 630 aaPredicted RBP20.06■□□□□ 0.8
HSPG2-204ENST00000412328 SIP14410 1827 aa20.06■□□□□ 0.8
HSPG2-204ENST00000412328 MMP3P08254 477 aa20.05■□□□□ 0.8
HSPG2-204ENST00000412328 HOXD8P13378 290 aaPredicted RBP20.05■□□□□ 0.8
HSPG2-204ENST00000412328 PSMC6P62333 389 aa20.05■□□□□ 0.8
HSPG2-204ENST00000412328 RUFY3Q7L099 469 aa20.05■□□□□ 0.8
HSPG2-204ENST00000412328 INPP4AQ96PE3 977 aaPredicted RBP20.05■□□□□ 0.8
HSPG2-204ENST00000412328 STXBP3O00186 592 aa20.04■□□□□ 0.8
HSPG2-204ENST00000412328 ADD1P35611 737 aaKnown RBP20.04■□□□□ 0.8
HSPG2-204ENST00000412328 METAP2P50579 478 aaKnown RBP eCLIP20.04■□□□□ 0.83e-9■■■■□ 23.8
HSPG2-204ENST00000412328 ITGA7Q13683 1181 aa20.04■□□□□ 0.8
HSPG2-204ENST00000412328 NTRK3Q16288 839 aa20.04■□□□□ 0.8
HSPG2-204ENST00000412328 PPP1R18Q6NYC8 613 aa20.04■□□□□ 0.8
HSPG2-204ENST00000412328 SYNE3Q6ZMZ3 975 aa20.04■□□□□ 0.8
HSPG2-204ENST00000412328 TDHQ8IZJ6 230 aa20.04■□□□□ 0.8
HSPG2-204ENST00000412328 ZFP91Q96JP5 570 aaPredicted RBP20.04■□□□□ 0.8
HSPG2-204ENST00000412328 POLR3EQ9NVU0 708 aa20.04■□□□□ 0.8
HSPG2-204ENST00000412328 ZEB2O60315 1214 aa20.03■□□□□ 0.8
HSPG2-204ENST00000412328 GH1P01241 217 aa20.03■□□□□ 0.8
HSPG2-204ENST00000412328 MYCLP12524 364 aaPredicted RBP20.03■□□□□ 0.8
HSPG2-204ENST00000412328 UBA1P22314 1058 aaKnown RBP20.03■□□□□ 0.8
HSPG2-204ENST00000412328 PSMA5P28066 241 aa20.03■□□□□ 0.8
HSPG2-204ENST00000412328 CCND2P30279 289 aa20.03■□□□□ 0.8
HSPG2-204ENST00000412328 SP2Q02086 613 aa20.03■□□□□ 0.8
HSPG2-204ENST00000412328 UBE2SQ16763 222 aa20.03■□□□□ 0.8
HSPG2-204ENST00000412328 BADQ92934 168 aa20.03■□□□□ 0.8
HSPG2-204ENST00000412328 UBE2OQ9C0C9 1292 aaKnown RBP20.03■□□□□ 0.8
HSPG2-204ENST00000412328 TET1Q8NFU7 2136 aa20.02■□□□□ 0.8
HSPG2-204ENST00000412328 hCG_1984214I3L0E3 225 aa20.02■□□□□ 0.8
HSPG2-204ENST00000412328 ICAM3P32942 547 aa20.02■□□□□ 0.8
HSPG2-204ENST00000412328 EPHB4P54760 987 aa20.02■□□□□ 0.8
HSPG2-204ENST00000412328 PKN1Q16512 942 aa20.02■□□□□ 0.8
HSPG2-204ENST00000412328 PCNX4Q63HM2 1172 aa20.02■□□□□ 0.8
HSPG2-204ENST00000412328 HEATR3Q7Z4Q2 680 aa20.02■□□□□ 0.8
HSPG2-204ENST00000412328 ZNF713Q8N859 430 aaPredicted RBP20.02■□□□□ 0.8
HSPG2-204ENST00000412328 AFG1LQ8WV93 481 aa20.02■□□□□ 0.8
HSPG2-204ENST00000412328 KAT2BQ92831 832 aa20.02■□□□□ 0.8
HSPG2-204ENST00000412328 MTG1Q9BT17 334 aaPredicted RBP20.02■□□□□ 0.8
HSPG2-204ENST00000412328 UPF3BQ9BZI7 483 aaKnown RBP20.02■□□□□ 0.8
HSPG2-204ENST00000412328 PRKAG2Q9UGJ0 569 aa20.02■□□□□ 0.8
HSPG2-204ENST00000412328 MRVI1Q9Y6F6 885 aa20.02■□□□□ 0.8
HSPG2-204ENST00000412328 DCDC2CA8MYV0 355 aa20.01■□□□□ 0.79
HSPG2-204ENST00000412328 B4GALT4O60513 344 aa20.01■□□□□ 0.79
HSPG2-204ENST00000412328 PDIA3P30101 505 aaKnown RBP20.01■□□□□ 0.79
HSPG2-204ENST00000412328 CLK2P49760 499 aaKnown RBP20.01■□□□□ 0.79
HSPG2-204ENST00000412328 LRIT3Q3SXY7 679 aa20.01■□□□□ 0.79
HSPG2-204ENST00000412328 MYSM1Q5VVJ2 828 aa20.01■□□□□ 0.79
HSPG2-204ENST00000412328 PPTC7Q8NI37 304 aa20.01■□□□□ 0.79
HSPG2-204ENST00000412328 SMARCC2Q8TAQ2 1214 aa20.01■□□□□ 0.79
HSPG2-204ENST00000412328 CTAGE1Q96RT6 745 aa20.01■□□□□ 0.79
HSPG2-204ENST00000412328 SEZ6LQ9BYH1 1024 aa20.01■□□□□ 0.79
HSPG2-204ENST00000412328 BCAS3Q9H6U6 928 aa20.01■□□□□ 0.79
HSPG2-204ENST00000412328 PSTPIP2Q9H939 334 aa20.01■□□□□ 0.79
HSPG2-204ENST00000412328 BARHL2Q9NY43 387 aa20.01■□□□□ 0.79
HSPG2-204ENST00000412328 KAT6AQ92794 2004 aa20■□□□□ 0.79
HSPG2-204ENST00000412328 ADAMTS3O15072 1205 aa20■□□□□ 0.79
HSPG2-204ENST00000412328 STAM2O75886 525 aa20■□□□□ 0.79
HSPG2-204ENST00000412328 MYL3P08590 195 aa20■□□□□ 0.79
HSPG2-204ENST00000412328 PFKFB3Q16875 520 aaPredicted RBP20■□□□□ 0.79
HSPG2-204ENST00000412328 ALDH8A1Q9H2A2 487 aaPredicted RBP20■□□□□ 0.79
HSPG2-204ENST00000412328 RIC8AQ9NPQ8 531 aa20■□□□□ 0.79
HSPG2-204ENST00000412328 TMEM39AQ9NV64 488 aa20■□□□□ 0.79
HSPG2-204ENST00000412328 V9GY48 417 aaPredicted RBP20■□□□□ 0.79
HSPG2-204ENST00000412328 UMODL1Q5DID0 1318 aa20■□□□□ 0.79
HSPG2-204ENST00000412328 SEC24BO95487 1268 aa19.99■□□□□ 0.79
HSPG2-204ENST00000412328 F2P00734 622 aa19.99■□□□□ 0.79
HSPG2-204ENST00000412328 TIMP1P01033 207 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms