RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 DHX38Q92620 1227 aaKnown RBP19.23■□□□□ 0.67
SCAMP4-203ENST00000411971 GPKOWQ92917 476 aaPredicted RBP eCLIP19.23■□□□□ 0.67
SCAMP4-203ENST00000411971 BCAS3Q9H6U6 928 aa19.23■□□□□ 0.67
SCAMP4-203ENST00000411971 GPHNQ9NQX3 736 aaPredicted RBP19.23■□□□□ 0.67
SCAMP4-203ENST00000411971 MRPL11Q9Y3B7 192 aaKnown RBP19.23■□□□□ 0.67
SCAMP4-203ENST00000411971 SORBS3O60504 671 aa19.22■□□□□ 0.67
SCAMP4-203ENST00000411971 NR3C2P08235 984 aa19.22■□□□□ 0.67
SCAMP4-203ENST00000411971 HIC1Q14526 733 aa19.22■□□□□ 0.67
SCAMP4-203ENST00000411971 GRM4Q14833 912 aa19.22■□□□□ 0.67
SCAMP4-203ENST00000411971 TCTN1Q2MV58 587 aa19.22■□□□□ 0.67
SCAMP4-203ENST00000411971 PIGSQ96S52 555 aa19.22■□□□□ 0.67
SCAMP4-203ENST00000411971 AMNQ9BXJ7 453 aa19.22■□□□□ 0.67
SCAMP4-203ENST00000411971 RAD50Q92878 1312 aa19.22■□□□□ 0.67
SCAMP4-203ENST00000411971 E7EWF7 191 aa19.21■□□□□ 0.67
SCAMP4-203ENST00000411971 ZBTB5O15062 677 aa19.21■□□□□ 0.67
SCAMP4-203ENST00000411971 GH1P01241 217 aa19.21■□□□□ 0.67
SCAMP4-203ENST00000411971 IQCF3P0C7M6 154 aa19.21■□□□□ 0.67
SCAMP4-203ENST00000411971 SUPT20HL2P0C7V6 817 aa19.21■□□□□ 0.67
SCAMP4-203ENST00000411971 SP2Q02086 613 aa19.21■□□□□ 0.67
SCAMP4-203ENST00000411971 STXBP2Q15833 593 aa19.21■□□□□ 0.67
SCAMP4-203ENST00000411971 ARHGEF16Q5VV41 709 aa19.21■□□□□ 0.67
SCAMP4-203ENST00000411971 SPRED2Q7Z698 418 aa19.21■□□□□ 0.67
SCAMP4-203ENST00000411971 MCF2L2Q86YR7 1114 aa19.21■□□□□ 0.67
SCAMP4-203ENST00000411971 PPM1EQ8WY54 764 aa19.21■□□□□ 0.67
SCAMP4-203ENST00000411971 WNT8BQ93098 351 aa19.21■□□□□ 0.67
SCAMP4-203ENST00000411971 IWS1Q96ST2 819 aa19.21■□□□□ 0.67
SCAMP4-203ENST00000411971 PDCD2LQ9BRP1 358 aa19.21■□□□□ 0.67
SCAMP4-203ENST00000411971 RIOX1Q9H6W3 641 aa19.21■□□□□ 0.67
SCAMP4-203ENST00000411971 SLC4A7Q9Y6M7 1214 aa19.21■□□□□ 0.67
SCAMP4-203ENST00000411971 ZBBXA8MT70 800 aa19.2■□□□□ 0.66
SCAMP4-203ENST00000411971 SGSM2O43147 1006 aa19.2■□□□□ 0.66
SCAMP4-203ENST00000411971 TROAPQ12815 778 aa19.2■□□□□ 0.66
SCAMP4-203ENST00000411971 HOMER1Q86YM7 354 aa19.2■□□□□ 0.66
SCAMP4-203ENST00000411971 RPUSD2Q8IZ73 545 aaKnown RBP19.2■□□□□ 0.66
SCAMP4-203ENST00000411971 MPHOSPH6Q99547 160 aaKnown RBP19.2■□□□□ 0.66
SCAMP4-203ENST00000411971 MAF1Q9H063 256 aa19.2■□□□□ 0.66
SCAMP4-203ENST00000411971 MSRAQ9UJ68 235 aa19.2■□□□□ 0.66
SCAMP4-203ENST00000411971 PCDHA1Q9Y5I3 950 aa19.2■□□□□ 0.66
SCAMP4-203ENST00000411971 XIRP2A4UGR9 3374 aa19.2■□□□□ 0.66
SCAMP4-203ENST00000411971 PRRC2BQ5JSZ5 2229 aaKnown RBP19.19■□□□□ 0.66
SCAMP4-203ENST00000411971 RFXAPO00287 272 aa19.19■□□□□ 0.66
SCAMP4-203ENST00000411971 IFIT3O14879 490 aaKnown RBP19.19■□□□□ 0.66
SCAMP4-203ENST00000411971 KPNA6O60684 536 aa19.19■□□□□ 0.66
SCAMP4-203ENST00000411971 ZNF286BP0CG31 522 aa19.19■□□□□ 0.66
SCAMP4-203ENST00000411971 MYCLP12524 364 aaPredicted RBP19.19■□□□□ 0.66
SCAMP4-203ENST00000411971 ZNF200P98182 395 aaPredicted RBP19.19■□□□□ 0.66
SCAMP4-203ENST00000411971 PTPN11Q06124 597 aaPredicted RBP19.19■□□□□ 0.66
SCAMP4-203ENST00000411971 RAB30Q15771 203 aa19.19■□□□□ 0.66
SCAMP4-203ENST00000411971 SKAP1Q86WV1 359 aa19.19■□□□□ 0.66
SCAMP4-203ENST00000411971 IGDCC4Q8TDY8 1250 aa19.19■□□□□ 0.66
SCAMP4-203ENST00000411971 HDAC6Q9UBN7 1215 aa19.19■□□□□ 0.66
SCAMP4-203ENST00000411971 TELO2Q9Y4R8 837 aa19.19■□□□□ 0.66
SCAMP4-203ENST00000411971 EPOPA6NHQ4 379 aa19.18■□□□□ 0.66
SCAMP4-203ENST00000411971 B4DLN1 442 aa19.18■□□□□ 0.66
SCAMP4-203ENST00000411971 HAS3O00219 553 aa19.18■□□□□ 0.66
SCAMP4-203ENST00000411971 PITPNM1O00562 1244 aa19.18■□□□□ 0.66
SCAMP4-203ENST00000411971 EIF3JO75822 258 aaKnown RBP19.18■□□□□ 0.66
SCAMP4-203ENST00000411971 ATP2A2P16615 1042 aaKnown RBP19.18■□□□□ 0.66
SCAMP4-203ENST00000411971 MRPL12P52815 198 aaKnown RBP19.18■□□□□ 0.66
SCAMP4-203ENST00000411971 PGM5Q15124 567 aa19.18■□□□□ 0.66
SCAMP4-203ENST00000411971 CCDC85BQ15834 202 aaPredicted RBP19.18■□□□□ 0.66
SCAMP4-203ENST00000411971 PTGISQ16647 500 aa19.18■□□□□ 0.66
SCAMP4-203ENST00000411971 BRDTQ58F21 947 aaPredicted RBP19.18■□□□□ 0.66
SCAMP4-203ENST00000411971 TMCO2Q7Z6W1 182 aaPredicted RBP19.18■□□□□ 0.66
SCAMP4-203ENST00000411971 SESTD1Q86VW0 696 aa19.18■□□□□ 0.66
SCAMP4-203ENST00000411971 MB21D2Q8IYB1 491 aaPredicted RBP19.18■□□□□ 0.66
SCAMP4-203ENST00000411971 EMID1Q96A84 441 aaPredicted RBP19.18■□□□□ 0.66
SCAMP4-203ENST00000411971 MYL10Q9BUA6 226 aa19.18■□□□□ 0.66
SCAMP4-203ENST00000411971 HSDL1Q3SXM5 330 aa19.17■□□□□ 0.66
SCAMP4-203ENST00000411971 TRAF7Q6Q0C0 670 aa19.17■□□□□ 0.66
SCAMP4-203ENST00000411971 VSIG10LQ86VR7 867 aa19.17■□□□□ 0.66
SCAMP4-203ENST00000411971 PIBF1Q8WXW3 757 aa19.17■□□□□ 0.66
SCAMP4-203ENST00000411971 MAP4K1Q92918 833 aa19.17■□□□□ 0.66
SCAMP4-203ENST00000411971 ALG1Q9BT22 464 aa19.17■□□□□ 0.66
SCAMP4-203ENST00000411971 MTIF3Q9H2K0 278 aaKnown RBP19.17■□□□□ 0.66
SCAMP4-203ENST00000411971 SLC28A3Q9HAS3 691 aa19.17■□□□□ 0.66
SCAMP4-203ENST00000411971 PCDHA11Q9Y5I1 949 aa19.17■□□□□ 0.66
SCAMP4-203ENST00000411971 MRVI1Q9Y6F6 885 aa19.17■□□□□ 0.66
SCAMP4-203ENST00000411971 U3KPZ7 1027 aaPredicted RBP19.17■□□□□ 0.66
SCAMP4-203ENST00000411971 COL4A4P53420 1690 aaPredicted RBP19.17■□□□□ 0.66
SCAMP4-203ENST00000411971 TCF20Q9UGU0 1960 aaKnown RBP19.16■□□□□ 0.66
SCAMP4-203ENST00000411971 CA3P07451 260 aa19.16■□□□□ 0.66
SCAMP4-203ENST00000411971 HOXD8P13378 290 aaPredicted RBP19.16■□□□□ 0.66
SCAMP4-203ENST00000411971 PSEN2P49810 448 aa19.16■□□□□ 0.66
SCAMP4-203ENST00000411971 TRIM71Q2Q1W2 868 aaKnown RBP19.16■□□□□ 0.66
SCAMP4-203ENST00000411971 MYSM1Q5VVJ2 828 aa19.16■□□□□ 0.66
SCAMP4-203ENST00000411971 GAS2L1Q99501 681 aaPredicted RBP19.16■□□□□ 0.66
SCAMP4-203ENST00000411971 CERS4Q9HA82 394 aa19.16■□□□□ 0.66
SCAMP4-203ENST00000411971 GTF2IRD1Q9UHL9 959 aa19.16■□□□□ 0.66
SCAMP4-203ENST00000411971 RBM8AQ9Y5S9 174 aaKnown RBP19.16■□□□□ 0.66
SCAMP4-203ENST00000411971 NBNO60934 754 aa19.15■□□□□ 0.66
SCAMP4-203ENST00000411971 F2P00734 622 aa19.15■□□□□ 0.66
SCAMP4-203ENST00000411971 PFKMP08237 780 aa19.15■□□□□ 0.66
SCAMP4-203ENST00000411971 CASTP20810 708 aaKnown RBP19.15■□□□□ 0.66
SCAMP4-203ENST00000411971 IGFBP4P22692 258 aa19.15■□□□□ 0.66
SCAMP4-203ENST00000411971 MRPS9P82933 396 aaKnown RBP19.15■□□□□ 0.66
SCAMP4-203ENST00000411971 SEMA3FQ13275 785 aa19.15■□□□□ 0.66
SCAMP4-203ENST00000411971 MBTPS1Q14703 1052 aa19.15■□□□□ 0.66
SCAMP4-203ENST00000411971 WTAPQ15007 396 aa19.15■□□□□ 0.66
SCAMP4-203ENST00000411971 PPP2R2DQ66LE6 453 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms