RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 ZYXQ15942 572 aaKnown RBP4.31□□□□□ -1.72
HMGB3P2-201ENST00000411913 SMN1Q16637 294 aaKnown RBP4.31□□□□□ -1.72
HMGB3P2-201ENST00000411913 HS1BP3Q53T59 392 aa4.31□□□□□ -1.72
HMGB3P2-201ENST00000411913 SLFN13Q68D06 897 aa4.31□□□□□ -1.72
HMGB3P2-201ENST00000411913 HEATR6Q6AI08 1181 aaKnown RBP4.31□□□□□ -1.72
HMGB3P2-201ENST00000411913 SND1Q7KZF4 910 aaKnown RBP eCLIP4.31□□□□□ -1.72
HMGB3P2-201ENST00000411913 MILR1Q7Z6M3 343 aa4.31□□□□□ -1.72
HMGB3P2-201ENST00000411913 KIAA0825Q8IV33 1275 aa4.31□□□□□ -1.72
HMGB3P2-201ENST00000411913 KBTBD2Q8IY47 623 aa4.31□□□□□ -1.72
HMGB3P2-201ENST00000411913 PLEKHO2Q8TD55 490 aa4.31□□□□□ -1.72
HMGB3P2-201ENST00000411913 GBP3Q9H0R5 595 aa4.31□□□□□ -1.72
HMGB3P2-201ENST00000411913 BTG4Q9NY30 223 aa4.31□□□□□ -1.72
HMGB3P2-201ENST00000411913 ZNF214Q9UL59 606 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P2-201ENST00000411913 SGSM2O43147 1006 aa4.3□□□□□ -1.72
HMGB3P2-201ENST00000411913 CBFA2T2O43439 604 aa4.3□□□□□ -1.72
HMGB3P2-201ENST00000411913 B4GALT4O60513 344 aa4.3□□□□□ -1.72
HMGB3P2-201ENST00000411913 PPM1BO75688 479 aa4.3□□□□□ -1.72
HMGB3P2-201ENST00000411913 TGM1P22735 817 aa4.3□□□□□ -1.72
HMGB3P2-201ENST00000411913 GUCY2CP25092 1073 aa4.3□□□□□ -1.72
HMGB3P2-201ENST00000411913 R3HDM1Q15032 1099 aaKnown RBP4.3□□□□□ -1.72
HMGB3P2-201ENST00000411913 FAM126BQ8IXS8 530 aa4.3□□□□□ -1.72
HMGB3P2-201ENST00000411913 SEC14L1Q92503 715 aa4.3□□□□□ -1.72
HMGB3P2-201ENST00000411913 WWC2-AS2Q96NR7 200 aa4.3□□□□□ -1.72
HMGB3P2-201ENST00000411913 HAUS7Q99871 368 aa4.3□□□□□ -1.72
HMGB3P2-201ENST00000411913 PTPN18Q99952 460 aa4.3□□□□□ -1.72
HMGB3P2-201ENST00000411913 SPON2Q9BUD6 331 aa4.3□□□□□ -1.72
HMGB3P2-201ENST00000411913 ZDHHC9Q9Y397 364 aa4.3□□□□□ -1.72
HMGB3P2-201ENST00000411913 TESMINQ9Y4I5 508 aa4.3□□□□□ -1.72
HMGB3P2-201ENST00000411913 WDR33Q9C0J8 1336 aaKnown RBP4.29□□□□□ -1.72
HMGB3P2-201ENST00000411913 PATE3B3GLJ2 98 aa4.29□□□□□ -1.72
HMGB3P2-201ENST00000411913 C22orf46C9J442 243 aa4.29□□□□□ -1.72
HMGB3P2-201ENST00000411913 CYP7B1O75881 506 aa4.29□□□□□ -1.72
HMGB3P2-201ENST00000411913 INHBEP58166 350 aa4.29□□□□□ -1.72
HMGB3P2-201ENST00000411913 GNPTABQ3T906 1256 aa4.29□□□□□ -1.72
HMGB3P2-201ENST00000411913 RUFY4Q6ZNE9 571 aa4.29□□□□□ -1.72
HMGB3P2-201ENST00000411913 TEX2Q8IWB9 1127 aa4.29□□□□□ -1.72
HMGB3P2-201ENST00000411913 MBD6Q96DN6 1003 aa4.29□□□□□ -1.72
HMGB3P2-201ENST00000411913 ZSWIM3Q96MP5 696 aa4.29□□□□□ -1.72
HMGB3P2-201ENST00000411913 YTHDC1Q96MU7 727 aaKnown RBP4.29□□□□□ -1.72
HMGB3P2-201ENST00000411913 CLIC6Q96NY7 704 aa4.29□□□□□ -1.72
HMGB3P2-201ENST00000411913 PODXL2Q9NZ53 605 aa4.29□□□□□ -1.72
HMGB3P2-201ENST00000411913 FTSJ1Q9UET6 329 aa4.29□□□□□ -1.72
HMGB3P2-201ENST00000411913 CROTQ9UKG9 612 aa4.29□□□□□ -1.72
HMGB3P2-201ENST00000411913 ZBTB7CA1YPR0 619 aa4.28□□□□□ -1.72
HMGB3P2-201ENST00000411913 THBDP07204 575 aa4.28□□□□□ -1.72
HMGB3P2-201ENST00000411913 ABHD18Q0P651 414 aa4.28□□□□□ -1.72
HMGB3P2-201ENST00000411913 ADAM9Q13443 819 aa4.28□□□□□ -1.72
HMGB3P2-201ENST00000411913 FOXE3Q13461 319 aa4.28□□□□□ -1.72
HMGB3P2-201ENST00000411913 PKN3Q6P5Z2 889 aa4.28□□□□□ -1.72
HMGB3P2-201ENST00000411913 DNAJC14Q6Y2X3 702 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P2-201ENST00000411913 Q8TCH9 128 aa4.28□□□□□ -1.72
HMGB3P2-201ENST00000411913 CHFRQ96EP1 664 aa4.28□□□□□ -1.72
HMGB3P2-201ENST00000411913 FGD4Q96M96 766 aa4.28□□□□□ -1.72
HMGB3P2-201ENST00000411913 BARX1Q9HBU1 254 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P2-201ENST00000411913 CLEC1BQ9P126 229 aa4.28□□□□□ -1.72
HMGB3P2-201ENST00000411913 CGGBP1Q9UFW8 167 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P2-201ENST00000411913 SUGT1Q9Y2Z0 365 aa4.28□□□□□ -1.72
HMGB3P2-201ENST00000411913 PLS3P13797 630 aa4.27□□□□□ -1.73
HMGB3P2-201ENST00000411913 MLLT6P55198 1093 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P2-201ENST00000411913 GRB10Q13322 594 aa4.27□□□□□ -1.73
HMGB3P2-201ENST00000411913 PRKD1Q15139 912 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P2-201ENST00000411913 CR1LQ2VPA4 569 aa4.27□□□□□ -1.73
HMGB3P2-201ENST00000411913 NRN1LQ496H8 165 aa4.27□□□□□ -1.73
HMGB3P2-201ENST00000411913 KLHL36Q8N4N3 616 aa4.27□□□□□ -1.73
HMGB3P2-201ENST00000411913 DPF3Q92784 378 aa4.27□□□□□ -1.73
HMGB3P2-201ENST00000411913 KLHL25Q9H0H3 589 aa4.27□□□□□ -1.73
HMGB3P2-201ENST00000411913 CSRNP2Q9H175 543 aa4.27□□□□□ -1.73
HMGB3P2-201ENST00000411913 EPHX1P07099 455 aa4.26□□□□□ -1.73
HMGB3P2-201ENST00000411913 SLC6A11P48066 632 aa4.26□□□□□ -1.73
HMGB3P2-201ENST00000411913 NFATC3Q12968 1075 aa4.26□□□□□ -1.73
HMGB3P2-201ENST00000411913 TRMT10BQ6PF06 316 aaKnown RBP4.26□□□□□ -1.73
HMGB3P2-201ENST00000411913 ZNF575Q86XF7 245 aa4.26□□□□□ -1.73
HMGB3P2-201ENST00000411913 ARHGEF39Q8N4T4 335 aa4.26□□□□□ -1.73
HMGB3P2-201ENST00000411913 CEP89Q96ST8 783 aa4.26□□□□□ -1.73
HMGB3P2-201ENST00000411913 ZNF202O95125 648 aa4.25□□□□□ -1.73
HMGB3P2-201ENST00000411913 PURAQ00577 322 aaKnown RBP4.25□□□□□ -1.73
HMGB3P2-201ENST00000411913 SLC7A5Q01650 507 aa4.25□□□□□ -1.73
HMGB3P2-201ENST00000411913 MROH9Q5TGP6 573 aa4.25□□□□□ -1.73
HMGB3P2-201ENST00000411913 MBLAC2Q68D91 279 aa4.25□□□□□ -1.73
HMGB3P2-201ENST00000411913 RBBP8NLQ8NC74 664 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P2-201ENST00000411913 TOE1Q96GM8 510 aaKnown RBP4.25□□□□□ -1.73
HMGB3P2-201ENST00000411913 RCC1LQ96I51 464 aaKnown RBP4.25□□□□□ -1.73
HMGB3P2-201ENST00000411913 WRNIP1Q96S55 665 aa4.25□□□□□ -1.73
HMGB3P2-201ENST00000411913 CRBNQ96SW2 442 aa4.25□□□□□ -1.73
HMGB3P2-201ENST00000411913 ADOQ96SZ5 270 aa4.25□□□□□ -1.73
HMGB3P2-201ENST00000411913 MMP19Q99542 508 aa4.25□□□□□ -1.73
HMGB3P2-201ENST00000411913 GPRC5CQ9NQ84 441 aa4.25□□□□□ -1.73
HMGB3P2-201ENST00000411913 PPT2Q9UMR5 302 aa4.25□□□□□ -1.73
HMGB3P2-201ENST00000411913 SLC12A7Q9Y666 1083 aa4.25□□□□□ -1.73
HMGB3P2-201ENST00000411913 MCM7P33993 719 aa4.24□□□□□ -1.73
HMGB3P2-201ENST00000411913 SCRN1Q12765 414 aa4.24□□□□□ -1.73
HMGB3P2-201ENST00000411913 MIIPQ5JXC2 388 aa4.24□□□□□ -1.73
HMGB3P2-201ENST00000411913 RNF207Q6ZRF8 634 aa4.24□□□□□ -1.73
HMGB3P2-201ENST00000411913 CEP68Q76N32 757 aa4.24□□□□□ -1.73
HMGB3P2-201ENST00000411913 GIMAP8Q8ND71 665 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P2-201ENST00000411913 ZCCHC14Q8WYQ9 949 aaKnown RBP4.24□□□□□ -1.73
HMGB3P2-201ENST00000411913 TRMT2BQ96GJ1 504 aaKnown RBP4.24□□□□□ -1.73
HMGB3P2-201ENST00000411913 GNRHR2Q96P88 292 aa4.24□□□□□ -1.73
HMGB3P2-201ENST00000411913 TRIM8Q9BZR9 551 aa4.24□□□□□ -1.73
HMGB3P2-201ENST00000411913 MEGF9Q9H1U4 602 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms