RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 UBA7P41226 1012 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 GUCA1AP43080 201 aaPredicted RBP4.95□□□□□ -1.62
PTPN13-202ENST00000411767 NSFP46459 744 aaKnown RBP4.95□□□□□ -1.62
PTPN13-202ENST00000411767 MYL5Q02045 173 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 UBE3AQ05086 875 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 FAF2Q96CS3 445 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 RUNDC3BQ96NL0 473 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 AIF1LQ9BQI0 150 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 RNF41Q9H4P4 317 aaPredicted RBP4.95□□□□□ -1.62
PTPN13-202ENST00000411767 GID8Q9NWU2 228 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 NFIBO00712 420 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 SNPHO15079 494 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 E2F6O75461 281 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 ADCY5O95622 1261 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 ZNF24P17028 368 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 ARMCX6Q7L4S7 300 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 NDUFAF2Q8N183 169 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 BLOC1S5Q8TDH9 187 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 SCFD1Q8WVM8 642 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 INTS4Q96HW7 963 aaKnown RBP4.95□□□□□ -1.62
PTPN13-202ENST00000411767 DHX36Q9H2U1 1008 aaKnown RBP4.95□□□□□ -1.62
PTPN13-202ENST00000411767 NRBP1Q9UHY1 535 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 DHX29Q7Z478 1369 aaKnown RBP4.95□□□□□ -1.62
PTPN13-202ENST00000411767 IFIT3O14879 490 aaKnown RBP4.95□□□□□ -1.62
PTPN13-202ENST00000411767 P4HA2O15460 535 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 P4HA1P13674 534 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 HSPA6P17066 643 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 PTPN9P43378 593 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 KANSL1Q7Z3B3 1105 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 IGSF22Q8N9C0 903 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 HPS1Q92902 700 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 PGBD1Q96JS3 809 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 CYTH2Q99418 400 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 EHD1Q9H4M9 534 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 FAM96AQ9H5X1 160 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 CACNA2D2Q9NY47 1150 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 NFU1Q9UMS0 254 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 ZNF711Q9Y462 761 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 AP4S1Q9Y587 144 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 KMOO15229 486 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 UFL1O94874 794 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 POLGP54098 1239 aaPredicted RBP4.95□□□□□ -1.62
PTPN13-202ENST00000411767 TBL3Q12788 808 aaKnown RBP4.95□□□□□ -1.62
PTPN13-202ENST00000411767 DPYDQ12882 1025 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 FKBP5Q13451 457 aaPredicted RBP4.95□□□□□ -1.62
PTPN13-202ENST00000411767 USP39Q53GS9 565 aaKnown RBP4.95□□□□□ -1.62
PTPN13-202ENST00000411767 BSPRYQ5W0U4 402 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 ICE2Q659A1 982 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 ULK3Q6PHR2 472 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 NEK8Q86SG6 692 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 SPICE1Q8N0Z3 855 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 OGFOD1Q8N543 542 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 TBC1D19Q8N5T2 526 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 TNIP2Q8NFZ5 429 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 TMEM5Q9Y2B1 443 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 DNAJC6O75061 913 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 IFNA16P05015 189 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 ART3Q13508 389 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 CARTPTQ16568 116 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 WASHC2DQ5SRD0 308 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 RAB11FIP2Q7L804 512 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 KRT12Q99456 494 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 KDM4CQ9H3R0 1056 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 PLEKHA5Q9HAU0 1116 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 IFT122Q9HBG6 1241 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 NEK6Q9HC98 313 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 HMG20AQ9NP66 347 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 BLOC1S6Q9UL45 172 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 TRIM33Q9UPN9 1127 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 HPDP32754 393 aaPredicted RBP4.95□□□□□ -1.62
PTPN13-202ENST00000411767 BBS7Q8IWZ6 715 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 MREGQ8N565 214 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 PROCA1Q8NCQ7 364 aaPredicted RBP4.95□□□□□ -1.62
PTPN13-202ENST00000411767 RBM46Q8TBY0 533 aaKnown RBP4.95□□□□□ -1.62
PTPN13-202ENST00000411767 CASP10Q92851 521 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 SAAL1Q96ER3 474 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 CEP95Q96GE4 821 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 ANKRD36BP1Q96IX9 119 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 ZKSCAN3Q9BRR0 538 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 CARD14Q9BXL6 1004 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 FTOQ9C0B1 505 aaKnown RBP eCLIP4.95□□□□□ -1.62
PTPN13-202ENST00000411767 SLC7A5P2Q9GIP4 190 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 ANAPC7Q9UJX3 599 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 APPL1Q9UKG1 709 aa4.95□□□□□ -1.62
PTPN13-202ENST00000411767 RPH3AQ9Y2J0 694 aaPredicted RBP4.95□□□□□ -1.62
PTPN13-202ENST00000411767 TRIM38O00635 465 aa4.94□□□□□ -1.62
PTPN13-202ENST00000411767 N4BP3O15049 544 aa4.94□□□□□ -1.62
PTPN13-202ENST00000411767 RPL13P26373 211 aaKnown RBP4.94□□□□□ -1.62
PTPN13-202ENST00000411767 MAPKAPK2P49137 400 aa4.94□□□□□ -1.62
PTPN13-202ENST00000411767 BCAR1P56945 870 aa4.94□□□□□ -1.62
PTPN13-202ENST00000411767 ARHGAP17Q68EM7 881 aa4.94□□□□□ -1.62
PTPN13-202ENST00000411767 CCDC137Q6PK04 289 aaKnown RBP4.94□□□□□ -1.62
PTPN13-202ENST00000411767 UBE2Q1Q7Z7E8 422 aa4.94□□□□□ -1.62
PTPN13-202ENST00000411767 APPL2Q8NEU8 664 aa4.94□□□□□ -1.62
PTPN13-202ENST00000411767 PTPRN2Q92932 1015 aa4.94□□□□□ -1.62
PTPN13-202ENST00000411767 DNAJC7Q99615 494 aa4.94□□□□□ -1.62
PTPN13-202ENST00000411767 TMOD3Q9NYL9 352 aa4.94□□□□□ -1.62
PTPN13-202ENST00000411767 CIDEBQ9UHD4 219 aa4.94□□□□□ -1.62
PTPN13-202ENST00000411767 IPPQ9Y573 584 aa4.94□□□□□ -1.62
PTPN13-202ENST00000411767 PSMD11O00231 422 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms