RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 LRRC8DQ7L1W4 858 aa19.52■□□□□ 0.72
MRPL55-220ENST00000411464 C7orf31Q8N865 590 aa19.52■□□□□ 0.72
MRPL55-220ENST00000411464 KAT2BQ92831 832 aa19.52■□□□□ 0.72
MRPL55-220ENST00000411464 C1QTNF1Q9BXJ1 281 aa19.52■□□□□ 0.72
MRPL55-220ENST00000411464 ARHGEF15O94989 841 aa19.51■□□□□ 0.71
MRPL55-220ENST00000411464 WDR5P61964 334 aaKnown RBP19.51■□□□□ 0.71
MRPL55-220ENST00000411464 FBXO11Q86XK2 927 aa19.51■□□□□ 0.71
MRPL55-220ENST00000411464 ANKS1AQ92625 1134 aa19.51■□□□□ 0.71
MRPL55-220ENST00000411464 HLA-CQ95604 372 aa19.51■□□□□ 0.71
MRPL55-220ENST00000411464 CTAGE1Q96RT6 745 aa19.51■□□□□ 0.71
MRPL55-220ENST00000411464 ZSCAN10Q96SZ4 725 aaPredicted RBP19.51■□□□□ 0.71
MRPL55-220ENST00000411464 VAT1LQ9HCJ6 419 aa19.51■□□□□ 0.71
MRPL55-220ENST00000411464 COL20A1Q9P218 1284 aa19.51■□□□□ 0.71
MRPL55-220ENST00000411464 RAPGEFL1Q9UHV5 662 aa19.51■□□□□ 0.71
MRPL55-220ENST00000411464 LCTP09848 1927 aa19.51■□□□□ 0.71
MRPL55-220ENST00000411464 XIRP2A4UGR9 3374 aa19.5■□□□□ 0.71
MRPL55-220ENST00000411464 PARP1P09874 1014 aaKnown RBP19.5■□□□□ 0.71
MRPL55-220ENST00000411464 GRB10Q13322 594 aa19.5■□□□□ 0.71
MRPL55-220ENST00000411464 LAMC2Q13753 1193 aa19.5■□□□□ 0.71
MRPL55-220ENST00000411464 QRICH1Q2TAL8 776 aa19.5■□□□□ 0.71
MRPL55-220ENST00000411464 CNKSR3Q6P9H4 555 aa19.5■□□□□ 0.71
MRPL55-220ENST00000411464 ALG1Q9BT22 464 aa19.5■□□□□ 0.71
MRPL55-220ENST00000411464 KATNAL1Q9BW62 490 aa19.5■□□□□ 0.71
MRPL55-220ENST00000411464 GTF2IRD1Q9UHL9 959 aa19.5■□□□□ 0.71
MRPL55-220ENST00000411464 DDX41Q9UJV9 622 aaKnown RBP19.5■□□□□ 0.71
MRPL55-220ENST00000411464 MRVI1Q9Y6F6 885 aa19.5■□□□□ 0.71
MRPL55-220ENST00000411464 TRANK1O15050 2925 aa19.49■□□□□ 0.71
MRPL55-220ENST00000411464 B4E1Z4 1266 aa19.49■□□□□ 0.71
MRPL55-220ENST00000411464 NR3C2P08235 984 aa19.49■□□□□ 0.71
MRPL55-220ENST00000411464 CKBP12277 381 aa19.49■□□□□ 0.71
MRPL55-220ENST00000411464 EIF2AK2P19525 551 aaKnown RBP19.49■□□□□ 0.71
MRPL55-220ENST00000411464 GPNMBQ14956 572 aa19.49■□□□□ 0.71
MRPL55-220ENST00000411464 CWC27Q6UX04 472 aaKnown RBP19.49■□□□□ 0.71
MRPL55-220ENST00000411464 DHX37Q8IY37 1157 aaKnown RBP19.49■□□□□ 0.71
MRPL55-220ENST00000411464 DHX38Q92620 1227 aaKnown RBP19.49■□□□□ 0.71
MRPL55-220ENST00000411464 JMJD4Q9H9V9 463 aa19.49■□□□□ 0.71
MRPL55-220ENST00000411464 DIAPH3Q9NSV4 1193 aa19.49■□□□□ 0.71
MRPL55-220ENST00000411464 ZSWIM5Q9P217 1185 aa19.49■□□□□ 0.71
MRPL55-220ENST00000411464 HDAC6Q9UBN7 1215 aa19.49■□□□□ 0.71
MRPL55-220ENST00000411464 REV3LO60673 3130 aa19.49■□□□□ 0.71
MRPL55-220ENST00000411464 SCN10AQ9Y5Y9 1956 aa19.48■□□□□ 0.71
MRPL55-220ENST00000411464 ABHD14A-ACY1A0A1B0GW23 586 aa19.48■□□□□ 0.71
MRPL55-220ENST00000411464 CFBP00751 764 aa19.48■□□□□ 0.71
MRPL55-220ENST00000411464 CXCL10P02778 98 aa19.48■□□□□ 0.71
MRPL55-220ENST00000411464 PSEN2P49810 448 aa19.48■□□□□ 0.71
MRPL55-220ENST00000411464 RBL2Q08999 1139 aa19.48■□□□□ 0.71
MRPL55-220ENST00000411464 MFSD10Q14728 455 aa19.48■□□□□ 0.71
MRPL55-220ENST00000411464 B4GALNT3Q6L9W6 998 aa19.48■□□□□ 0.71
MRPL55-220ENST00000411464 TMCO2Q7Z6W1 182 aaPredicted RBP19.48■□□□□ 0.71
MRPL55-220ENST00000411464 ENAHQ8N8S7 591 aaPredicted RBP19.48■□□□□ 0.71
MRPL55-220ENST00000411464 PPTC7Q8NI37 304 aa19.48■□□□□ 0.71
MRPL55-220ENST00000411464 EMID1Q96A84 441 aaPredicted RBP19.48■□□□□ 0.71
MRPL55-220ENST00000411464 RAD9AQ99638 391 aa19.48■□□□□ 0.71
MRPL55-220ENST00000411464 PXMP2Q9NR77 195 aa19.48■□□□□ 0.71
MRPL55-220ENST00000411464 LMCD1Q9NZU5 365 aa19.48■□□□□ 0.71
MRPL55-220ENST00000411464 BDP1A6H8Y1 2624 aa19.48■□□□□ 0.71
MRPL55-220ENST00000411464 LCHNA4D1U4 455 aa19.47■□□□□ 0.71
MRPL55-220ENST00000411464 NBNO60934 754 aa19.47■□□□□ 0.71
MRPL55-220ENST00000411464 EFCAB14O75071 495 aa19.47■□□□□ 0.71
MRPL55-220ENST00000411464 PTK7Q13308 1070 aa19.47■□□□□ 0.71
MRPL55-220ENST00000411464 IKBKEQ14164 716 aa19.47■□□□□ 0.71
MRPL55-220ENST00000411464 IMMTQ16891 758 aaKnown RBP19.47■□□□□ 0.71
MRPL55-220ENST00000411464 KIAA0753Q2KHM9 967 aa19.47■□□□□ 0.71
MRPL55-220ENST00000411464 UBAC1Q9BSL1 405 aa19.47■□□□□ 0.71
MRPL55-220ENST00000411464 AMNQ9BXJ7 453 aa19.47■□□□□ 0.71
MRPL55-220ENST00000411464 KRT23Q9C075 422 aa19.47■□□□□ 0.71
MRPL55-220ENST00000411464 RWDD1Q9H446 243 aaPredicted RBP19.47■□□□□ 0.71
MRPL55-220ENST00000411464 CTNNA3Q9UI47 895 aa19.47■□□□□ 0.71
MRPL55-220ENST00000411464 GBF1Q92538 1859 aa19.46■□□□□ 0.71
MRPL55-220ENST00000411464 HIP1O00291 1037 aa19.46■□□□□ 0.71
MRPL55-220ENST00000411464 LPXNO60711 386 aa19.46■□□□□ 0.71
MRPL55-220ENST00000411464 PPFIA4O75335 1185 aa19.46■□□□□ 0.71
MRPL55-220ENST00000411464 DEFB103AP81534 67 aa19.46■□□□□ 0.71
MRPL55-220ENST00000411464 SPRED2Q7Z698 418 aa19.46■□□□□ 0.71
MRPL55-220ENST00000411464 GJB5O95377 273 aa19.45■□□□□ 0.7
MRPL55-220ENST00000411464 F2P00734 622 aa19.45■□□□□ 0.7
MRPL55-220ENST00000411464 ZNF286BP0CG31 522 aa19.45■□□□□ 0.7
MRPL55-220ENST00000411464 MYCLP12524 364 aaPredicted RBP19.45■□□□□ 0.7
MRPL55-220ENST00000411464 KCNV1Q6PIU1 500 aa19.45■□□□□ 0.7
MRPL55-220ENST00000411464 CHD1LQ86WJ1 897 aa19.45■□□□□ 0.7
MRPL55-220ENST00000411464 FAM122AQ96E09 287 aa19.45■□□□□ 0.7
MRPL55-220ENST00000411464 TGS1Q96RS0 853 aaKnown RBP19.45■□□□□ 0.7
MRPL55-220ENST00000411464 DSCC1Q9BVC3 393 aa19.45■□□□□ 0.7
MRPL55-220ENST00000411464 CNNM2Q9H8M5 875 aa19.45■□□□□ 0.7
MRPL55-220ENST00000411464 MAP3K20Q9NYL2 800 aaKnown RBP19.45■□□□□ 0.7
MRPL55-220ENST00000411464 MTUS1Q9ULD2 1270 aa19.45■□□□□ 0.7
MRPL55-220ENST00000411464 HAS3O00219 553 aa19.44■□□□□ 0.7
MRPL55-220ENST00000411464 HSD17B4P51659 736 aa19.44■□□□□ 0.7
MRPL55-220ENST00000411464 AAMPQ13685 434 aa19.44■□□□□ 0.7
MRPL55-220ENST00000411464 IFIT1BQ5T764 474 aaKnown RBP19.44■□□□□ 0.7
MRPL55-220ENST00000411464 ZNF618Q5T7W0 954 aa19.44■□□□□ 0.7
MRPL55-220ENST00000411464 PLEKHM2Q8IWE5 1019 aa19.44■□□□□ 0.7
MRPL55-220ENST00000411464 SMC5Q8IY18 1101 aa19.44■□□□□ 0.7
MRPL55-220ENST00000411464 GDPD5Q8WTR4 605 aa19.44■□□□□ 0.7
MRPL55-220ENST00000411464 SPATA33Q96N06 139 aa19.44■□□□□ 0.7
MRPL55-220ENST00000411464 OSBPL3Q9H4L5 887 aa19.44■□□□□ 0.7
MRPL55-220ENST00000411464 SUGCTQ9HAC7 445 aa19.44■□□□□ 0.7
MRPL55-220ENST00000411464 PCDHA1Q9Y5I3 950 aa19.44■□□□□ 0.7
MRPL55-220ENST00000411464 PRRC2BQ5JSZ5 2229 aaKnown RBP19.44■□□□□ 0.7
MRPL55-220ENST00000411464 SCN5AQ14524 2016 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms