RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 TNFRSF12AQ9NP84 129 aa3.72□□□□□ -1.81
RNU6-1140P-201ENST00000410517 WHRNQ9P202 907 aa3.72□□□□□ -1.81
RNU6-1140P-201ENST00000410517 TCFL5Q9UL49 500 aa3.72□□□□□ -1.81
RNU6-1140P-201ENST00000410517 ZNF214Q9UL59 606 aaPredicted RBP3.72□□□□□ -1.81
RNU6-1140P-201ENST00000410517 SUGT1Q9Y2Z0 365 aa3.72□□□□□ -1.81
RNU6-1140P-201ENST00000410517 SF3B6Q9Y3B4 125 aaKnown RBP3.72□□□□□ -1.81
RNU6-1140P-201ENST00000410517 MSRB2Q9Y3D2 182 aa3.72□□□□□ -1.81
RNU6-1140P-201ENST00000410517 FADS2P1A8MWK0 482 aa3.71□□□□□ -1.82
RNU6-1140P-201ENST00000410517 CHURC1-FNTBB4DL54 471 aa3.71□□□□□ -1.82
RNU6-1140P-201ENST00000410517 SMARCA5O60264 1052 aaPredicted RBP3.71□□□□□ -1.82
RNU6-1140P-201ENST00000410517 SARSP49591 514 aaKnown RBP3.71□□□□□ -1.82
RNU6-1140P-201ENST00000410517 PCBP3P57721 371 aaKnown RBP3.71□□□□□ -1.82
RNU6-1140P-201ENST00000410517 SSRP1Q08945 709 aaKnown RBP3.71□□□□□ -1.82
RNU6-1140P-201ENST00000410517 RASA3Q14644 834 aa3.71□□□□□ -1.82
RNU6-1140P-201ENST00000410517 NR1I3Q14994 352 aa3.71□□□□□ -1.82
RNU6-1140P-201ENST00000410517 SV2CQ496J9 727 aa3.71□□□□□ -1.82
RNU6-1140P-201ENST00000410517 SDE2Q6IQ49 451 aa3.71□□□□□ -1.82
RNU6-1140P-201ENST00000410517 KIAA1211LQ6NV74 962 aa3.71□□□□□ -1.82
RNU6-1140P-201ENST00000410517 C6orf15Q6UXA7 325 aaPredicted RBP3.71□□□□□ -1.82
RNU6-1140P-201ENST00000410517 ADAT2Q7Z6V5 191 aaKnown RBP3.71□□□□□ -1.82
RNU6-1140P-201ENST00000410517 PALM2Q8IXS6 379 aa3.71□□□□□ -1.82
RNU6-1140P-201ENST00000410517 NUP43Q8NFH3 380 aa3.71□□□□□ -1.82
RNU6-1140P-201ENST00000410517 ZCRB1Q8TBF4 217 aaKnown RBP3.71□□□□□ -1.82
RNU6-1140P-201ENST00000410517 PPP1R14AQ96A00 147 aa3.71□□□□□ -1.82
RNU6-1140P-201ENST00000410517 KIF2CQ99661 725 aa3.71□□□□□ -1.82
RNU6-1140P-201ENST00000410517 DSCC1Q9BVC3 393 aa3.71□□□□□ -1.82
RNU6-1140P-201ENST00000410517 ZNF341Q9BYN7 854 aa3.71□□□□□ -1.82
RNU6-1140P-201ENST00000410517 TNFRSF10DQ9UBN6 386 aa3.71□□□□□ -1.82
RNU6-1140P-201ENST00000410517 FBXL21Q9UKT6 434 aa3.71□□□□□ -1.82
RNU6-1140P-201ENST00000410517 GPR55Q9Y2T6 319 aaPredicted RBP3.71□□□□□ -1.82
RNU6-1140P-201ENST00000410517 PRKAB1Q9Y478 270 aa3.71□□□□□ -1.82
RNU6-1140P-201ENST00000410517 WDR33Q9C0J8 1336 aaKnown RBP3.7□□□□□ -1.82
RNU6-1140P-201ENST00000410517 A0A087WZG4 1122 aa3.7□□□□□ -1.82
RNU6-1140P-201ENST00000410517 ENPP3O14638 875 aa3.7□□□□□ -1.82
RNU6-1140P-201ENST00000410517 SUSD5O60279 629 aa3.7□□□□□ -1.82
RNU6-1140P-201ENST00000410517 CDC45O75419 566 aa3.7□□□□□ -1.82
RNU6-1140P-201ENST00000410517 GJB6O95452 261 aa3.7□□□□□ -1.82
RNU6-1140P-201ENST00000410517 NANOS3P60323 173 aaKnown RBP3.7□□□□□ -1.82
RNU6-1140P-201ENST00000410517 NMIQ13287 307 aaPredicted RBP3.7□□□□□ -1.82
RNU6-1140P-201ENST00000410517 HSP90AA2PQ14568 343 aaPredicted RBP3.7□□□□□ -1.82
RNU6-1140P-201ENST00000410517 TCEA2Q15560 299 aa3.7□□□□□ -1.82
RNU6-1140P-201ENST00000410517 ANKRD39Q53RE8 183 aa3.7□□□□□ -1.82
RNU6-1140P-201ENST00000410517 C2orf27AQ580R0 203 aa3.7□□□□□ -1.82
RNU6-1140P-201ENST00000410517 FAM169BQ8N8A8 192 aa3.7□□□□□ -1.82
RNU6-1140P-201ENST00000410517 ENOX1Q8TC92 643 aaKnown RBP3.7□□□□□ -1.82
RNU6-1140P-201ENST00000410517 SYTL5Q8TDW5 730 aaPredicted RBP3.7□□□□□ -1.82
RNU6-1140P-201ENST00000410517 CHFRQ96EP1 664 aa3.7□□□□□ -1.82
RNU6-1140P-201ENST00000410517 KREMEN1Q96MU8 473 aa3.7□□□□□ -1.82
RNU6-1140P-201ENST00000410517 SLC9A7Q96T83 725 aa3.7□□□□□ -1.82
RNU6-1140P-201ENST00000410517 CDC6Q99741 560 aa3.7□□□□□ -1.82
RNU6-1140P-201ENST00000410517 SSBP3Q9BWW4 388 aaPredicted RBP3.7□□□□□ -1.82
RNU6-1140P-201ENST00000410517 ST7Q9NRC1 585 aa3.7□□□□□ -1.82
RNU6-1140P-201ENST00000410517 INVSQ9Y283 1065 aa3.7□□□□□ -1.82
RNU6-1140P-201ENST00000410517 RIMBP3CA6NJZ7 1639 aa3.7□□□□□ -1.82
RNU6-1140P-201ENST00000410517 RIMBP3BA6NNM3 1639 aa3.7□□□□□ -1.82
RNU6-1140P-201ENST00000410517 RIMBP3Q9UFD9 1639 aa3.7□□□□□ -1.82
RNU6-1140P-201ENST00000410517 KDM2BQ8NHM5 1336 aa3.7□□□□□ -1.82
RNU6-1140P-201ENST00000410517 TRBV23OR9-2A0A075B6M9 112 aa3.69□□□□□ -1.82
RNU6-1140P-201ENST00000410517 TRAV20A0A0B4J274 112 aa3.69□□□□□ -1.82
RNU6-1140P-201ENST00000410517 UPK3BL1B0FP48 263 aa3.69□□□□□ -1.82
RNU6-1140P-201ENST00000410517 UPK3BL2E5RIL1 263 aa3.69□□□□□ -1.82
RNU6-1140P-201ENST00000410517 SYPP08247 313 aa3.69□□□□□ -1.82
RNU6-1140P-201ENST00000410517 NOP2P46087 812 aaKnown RBP3.69□□□□□ -1.82
RNU6-1140P-201ENST00000410517 POU4F1Q01851 419 aa3.69□□□□□ -1.82
RNU6-1140P-201ENST00000410517 GRB10Q13322 594 aa3.69□□□□□ -1.82
RNU6-1140P-201ENST00000410517 ICAM4Q14773 271 aa3.69□□□□□ -1.82
RNU6-1140P-201ENST00000410517 C7orf61Q8IZ16 206 aa3.69□□□□□ -1.82
RNU6-1140P-201ENST00000410517 TCTN2Q96GX1 697 aa3.69□□□□□ -1.82
RNU6-1140P-201ENST00000410517 CCDC140Q96MF4 163 aa3.69□□□□□ -1.82
RNU6-1140P-201ENST00000410517 HAUS7Q99871 368 aa3.69□□□□□ -1.82
RNU6-1140P-201ENST00000410517 NTMQ9P121 344 aa3.69□□□□□ -1.82
RNU6-1140P-201ENST00000410517 PLA2G2DQ9UNK4 145 aa3.69□□□□□ -1.82
RNU6-1140P-201ENST00000410517 PLAAQ9Y263 795 aa3.69□□□□□ -1.82
RNU6-1140P-201ENST00000410517 DIS3Q9Y2L1 958 aaKnown RBP3.69□□□□□ -1.82
RNU6-1140P-201ENST00000410517 KIF21AQ7Z4S6 1674 aa3.68□□□□□ -1.82
RNU6-1140P-201ENST00000410517 FAM86C2PA6NEL3 165 aa3.68□□□□□ -1.82
RNU6-1140P-201ENST00000410517 HSP90B1P14625 803 aaKnown RBP3.68□□□□□ -1.82
RNU6-1140P-201ENST00000410517 RUFY4Q6ZNE9 571 aa3.68□□□□□ -1.82
RNU6-1140P-201ENST00000410517 FAM177A1Q8N128 213 aaPredicted RBP3.68□□□□□ -1.82
RNU6-1140P-201ENST00000410517 LGI4Q8N135 537 aa3.68□□□□□ -1.82
RNU6-1140P-201ENST00000410517 CELF2-AS1Q8N7Q2 184 aa3.68□□□□□ -1.82
RNU6-1140P-201ENST00000410517 LINC00116Q8NCU8 138 aa3.68□□□□□ -1.82
RNU6-1140P-201ENST00000410517 BVESQ8NE79 360 aa3.68□□□□□ -1.82
RNU6-1140P-201ENST00000410517 RCC1LQ96I51 464 aaKnown RBP3.68□□□□□ -1.82
RNU6-1140P-201ENST00000410517 FCRL2Q96LA5 508 aaPredicted RBP3.68□□□□□ -1.82
RNU6-1140P-201ENST00000410517 FEZ1Q99689 392 aa3.68□□□□□ -1.82
RNU6-1140P-201ENST00000410517 AARSD1Q9BTE6 412 aaKnown RBP3.68□□□□□ -1.82
RNU6-1140P-201ENST00000410517 SPATA9Q9BWV2 254 aa3.68□□□□□ -1.82
RNU6-1140P-201ENST00000410517 HDAC8Q9BY41 377 aa3.68□□□□□ -1.82
RNU6-1140P-201ENST00000410517 DEF6Q9H4E7 631 aa3.68□□□□□ -1.82
RNU6-1140P-201ENST00000410517 ANTXR1Q9H6X2 564 aa3.68□□□□□ -1.82
RNU6-1140P-201ENST00000410517 ACSL6Q9UKU0 697 aa3.68□□□□□ -1.82
RNU6-1140P-201ENST00000410517 TBX22Q9Y458 520 aa3.68□□□□□ -1.82
RNU6-1140P-201ENST00000410517 HCFC2Q9Y5Z7 792 aa3.68□□□□□ -1.82
RNU6-1140P-201ENST00000410517 FHOD1Q9Y613 1164 aa3.68□□□□□ -1.82
RNU6-1140P-201ENST00000410517 WDR97A6NE52 1622 aa3.68□□□□□ -1.82
RNU6-1140P-201ENST00000410517 ANKRD62A6NC57 917 aa3.67□□□□□ -1.82
RNU6-1140P-201ENST00000410517 UBOX5O94941 541 aa3.67□□□□□ -1.82
RNU6-1140P-201ENST00000410517 CPP00450 1065 aa3.67□□□□□ -1.82
RNU6-1140P-201ENST00000410517 GSNP06396 782 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms