RNA–Protein interactions for RNA: ENST00000409953.5

UBE2F-204, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3 BASIC

Gene UBE2F, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-204ENST00000409953 BEND3Q5T5X7 828 aa8.6□□□□□ -1.03
UBE2F-204ENST00000409953 ATF7IPQ6VMQ6 1270 aa8.6□□□□□ -1.03
UBE2F-204ENST00000409953 RBM23Q86U06 439 aaKnown RBP8.6□□□□□ -1.03
UBE2F-204ENST00000409953 TGFBRAP1Q8WUH2 860 aa8.6□□□□□ -1.03
UBE2F-204ENST00000409953 CABP5Q9NP86 173 aa8.6□□□□□ -1.03
UBE2F-204ENST00000409953 PARD6AQ9NPB6 346 aa8.6□□□□□ -1.03
UBE2F-204ENST00000409953 POLR3EQ9NVU0 708 aa8.6□□□□□ -1.03
UBE2F-204ENST00000409953 IFT57Q9NWB7 429 aa8.6□□□□□ -1.03
UBE2F-204ENST00000409953 C9orf78Q9NZ63 289 aaPredicted RBP8.6□□□□□ -1.03
UBE2F-204ENST00000409953 SAP30BPQ9UHR5 308 aaKnown RBP8.6□□□□□ -1.03
UBE2F-204ENST00000409953 ZNF214Q9UL59 606 aaPredicted RBP8.6□□□□□ -1.03
UBE2F-204ENST00000409953 TRIP12Q14669 1992 aaPredicted RBP8.6□□□□□ -1.03
UBE2F-204ENST00000409953 MYO10Q9HD67 2058 aa8.6□□□□□ -1.03
UBE2F-204ENST00000409953 MYO18BQ8IUG5 2567 aa8.59□□□□□ -1.03
UBE2F-204ENST00000409953 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.59□□□□□ -1.03
UBE2F-204ENST00000409953 C2CD4DB7Z1M9 353 aa8.59□□□□□ -1.03
UBE2F-204ENST00000409953 E9PSI1 815 aa8.59□□□□□ -1.03
UBE2F-204ENST00000409953 MYL3P08590 195 aa8.59□□□□□ -1.03
UBE2F-204ENST00000409953 CAMK1Q14012 370 aa8.59□□□□□ -1.03
UBE2F-204ENST00000409953 ATP2B3Q16720 1220 aa8.59□□□□□ -1.03
UBE2F-204ENST00000409953 TATDN1Q6P1N9 297 aa8.59□□□□□ -1.03
UBE2F-204ENST00000409953 CCDC146Q8IYE0 955 aa8.59□□□□□ -1.03
UBE2F-204ENST00000409953 SPICE1Q8N0Z3 855 aa8.59□□□□□ -1.03
UBE2F-204ENST00000409953 FAM133AQ8N9E0 248 aa8.59□□□□□ -1.03
UBE2F-204ENST00000409953 ADAM32Q8TC27 787 aa8.59□□□□□ -1.03
UBE2F-204ENST00000409953 NSUN4Q96CB9 384 aaKnown RBP8.59□□□□□ -1.03
UBE2F-204ENST00000409953 KAZALD1Q96I82 304 aa8.59□□□□□ -1.03
UBE2F-204ENST00000409953 EPAS1Q99814 870 aa8.59□□□□□ -1.03
UBE2F-204ENST00000409953 ERVK-5Q9HDB9 667 aa8.59□□□□□ -1.03
UBE2F-204ENST00000409953 SMG5Q9UPR3 1016 aaKnown RBP8.59□□□□□ -1.03
UBE2F-204ENST00000409953 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.59□□□□□ -1.03
UBE2F-204ENST00000409953 PARP14Q460N5 1801 aa8.59□□□□□ -1.03
UBE2F-204ENST00000409953 IGSF10Q6WRI0 2623 aa8.58□□□□□ -1.04
UBE2F-204ENST00000409953 HECTD1Q9ULT8 2610 aa8.58□□□□□ -1.04
UBE2F-204ENST00000409953 TMEM8BA6NDV4 472 aa8.58□□□□□ -1.04
UBE2F-204ENST00000409953 SPTLC1O15269 473 aa8.58□□□□□ -1.04
UBE2F-204ENST00000409953 LGR5O75473 907 aa8.58□□□□□ -1.04
UBE2F-204ENST00000409953 UPP2O95045 317 aa8.58□□□□□ -1.04
UBE2F-204ENST00000409953 GUCY1A2P33402 732 aa8.58□□□□□ -1.04
UBE2F-204ENST00000409953 BMPR1AP36894 532 aa8.58□□□□□ -1.04
UBE2F-204ENST00000409953 GNAI1P63096 354 aa8.58□□□□□ -1.04
UBE2F-204ENST00000409953 RBM10P98175 930 aaKnown RBP8.58□□□□□ -1.04
UBE2F-204ENST00000409953 SEPT2Q15019 361 aa8.58□□□□□ -1.04
UBE2F-204ENST00000409953 PTGISQ16647 500 aa8.58□□□□□ -1.04
UBE2F-204ENST00000409953 CERKLQ49MI3 558 aaPredicted RBP8.58□□□□□ -1.04
UBE2F-204ENST00000409953 NFRKBQ6P4R8 1299 aa8.58□□□□□ -1.04
UBE2F-204ENST00000409953 SIX5Q8N196 739 aa8.58□□□□□ -1.04
UBE2F-204ENST00000409953 FIBCD1Q8N539 461 aa8.58□□□□□ -1.04
UBE2F-204ENST00000409953 DDX1Q92499 740 aaKnown RBP8.58□□□□□ -1.04
UBE2F-204ENST00000409953 PKNOX2Q96KN3 472 aa8.58□□□□□ -1.04
UBE2F-204ENST00000409953 MTG1Q9BT17 334 aaPredicted RBP8.58□□□□□ -1.04
UBE2F-204ENST00000409953 ADAMTS5Q9UNA0 930 aa8.58□□□□□ -1.04
UBE2F-204ENST00000409953 PDS5AQ29RF7 1337 aaKnown RBP8.57□□□□□ -1.04
UBE2F-204ENST00000409953 ITPR1Q14643 2758 aa8.57□□□□□ -1.04
UBE2F-204ENST00000409953 SCN10AQ9Y5Y9 1956 aa8.57□□□□□ -1.04
UBE2F-204ENST00000409953 F6X3S4 739 aa8.57□□□□□ -1.04
UBE2F-204ENST00000409953 VWA5AO00534 786 aa8.57□□□□□ -1.04
UBE2F-204ENST00000409953 NUDT7P0C024 238 aa8.57□□□□□ -1.04
UBE2F-204ENST00000409953 LINC00271P0C7V0 271 aa8.57□□□□□ -1.04
UBE2F-204ENST00000409953 DHX38Q92620 1227 aaKnown RBP8.57□□□□□ -1.04
UBE2F-204ENST00000409953 DDX12PQ92771 950 aa8.57□□□□□ -1.04
UBE2F-204ENST00000409953 NEK1Q96PY6 1258 aa8.57□□□□□ -1.04
UBE2F-204ENST00000409953 NOL10Q9BSC4 688 aaKnown RBP8.57□□□□□ -1.04
UBE2F-204ENST00000409953 BICC1Q9H694 974 aaKnown RBP8.57□□□□□ -1.04
UBE2F-204ENST00000409953 FBXO28Q9NVF7 368 aa8.57□□□□□ -1.04
UBE2F-204ENST00000409953 AATFQ9NY61 560 aaKnown RBP eCLIP8.57□□□□□ -1.04
UBE2F-204ENST00000409953 FBXL21Q9UKT6 434 aa8.57□□□□□ -1.04
UBE2F-204ENST00000409953 Q9Y3F1 56 aa8.57□□□□□ -1.04
UBE2F-204ENST00000409953 RWDD3Q9Y3V2 267 aa8.57□□□□□ -1.04
UBE2F-204ENST00000409953 PCDHGA10Q9Y5H3 936 aa8.57□□□□□ -1.04
UBE2F-204ENST00000409953 ZNF462Q96JM2 2506 aa8.56□□□□□ -1.04
UBE2F-204ENST00000409953 EIF4E1BA6NMX2 242 aaKnown RBP8.56□□□□□ -1.04
UBE2F-204ENST00000409953 CKBP12277 381 aa8.56□□□□□ -1.04
UBE2F-204ENST00000409953 RFX1P22670 979 aa8.56□□□□□ -1.04
UBE2F-204ENST00000409953 DNAJB1P25685 340 aa8.56□□□□□ -1.04
UBE2F-204ENST00000409953 FOSBP53539 338 aa8.56□□□□□ -1.04
UBE2F-204ENST00000409953 PTPN11Q06124 597 aaPredicted RBP8.56□□□□□ -1.04
UBE2F-204ENST00000409953 RBL2Q08999 1139 aa8.56□□□□□ -1.04
UBE2F-204ENST00000409953 RABL6Q3YEC7 729 aaPredicted RBP8.56□□□□□ -1.04
UBE2F-204ENST00000409953 SPECC1Q5M775 1068 aa8.56□□□□□ -1.04
UBE2F-204ENST00000409953 CCDC102BQ68D86 513 aa8.56□□□□□ -1.04
UBE2F-204ENST00000409953 SNRNP48Q6IEG0 339 aaKnown RBP8.56□□□□□ -1.04
UBE2F-204ENST00000409953 C1orf210Q8IVY1 113 aa8.56□□□□□ -1.04
UBE2F-204ENST00000409953 REPS2Q8NFH8 660 aa8.56□□□□□ -1.04
UBE2F-204ENST00000409953 VN1R2Q8NFZ6 395 aa8.56□□□□□ -1.04
UBE2F-204ENST00000409953 TOP1MTQ969P6 601 aa8.56□□□□□ -1.04
UBE2F-204ENST00000409953 CTAGE1Q96RT6 745 aa8.56□□□□□ -1.04
UBE2F-204ENST00000409953 APOL5Q9BWW9 433 aa8.56□□□□□ -1.04
UBE2F-204ENST00000409953 TEX13BQ9BXU2 312 aa8.56□□□□□ -1.04
UBE2F-204ENST00000409953 IFIH1Q9BYX4 1025 aaKnown RBP8.56□□□□□ -1.04
UBE2F-204ENST00000409953 S1PR5Q9H228 398 aa8.56□□□□□ -1.04
UBE2F-204ENST00000409953 PDGFCQ9NRA1 345 aa8.56□□□□□ -1.04
UBE2F-204ENST00000409953 EYA2O00167 538 aa8.55□□□□□ -1.04
UBE2F-204ENST00000409953 WDR46O15213 610 aaKnown RBP8.55□□□□□ -1.04
UBE2F-204ENST00000409953 ADORA1P30542 326 aa8.55□□□□□ -1.04
UBE2F-204ENST00000409953 SLC4A3P48751 1232 aa8.55□□□□□ -1.04
UBE2F-204ENST00000409953 CPT1AP50416 773 aa8.55□□□□□ -1.04
UBE2F-204ENST00000409953 CHMP4BP1P59074 171 aa8.55□□□□□ -1.04
UBE2F-204ENST00000409953 TBC1D8BQ0IIM8 1120 aa8.55□□□□□ -1.04
UBE2F-204ENST00000409953 MBTPS1Q14703 1052 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms