RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 ANO6Q4KMQ2 910 aa14.05□□□□□ -0.16
CHMP3-204ENST00000409727 L1TD1Q5T7N2 865 aaKnown RBP14.05□□□□□ -0.16
CHMP3-204ENST00000409727 TEX2Q8IWB9 1127 aa14.05□□□□□ -0.16
CHMP3-204ENST00000409727 IGSF22Q8N9C0 903 aa14.05□□□□□ -0.16
CHMP3-204ENST00000409727 IQUBQ8NA54 791 aa14.05□□□□□ -0.16
CHMP3-204ENST00000409727 AK8Q96MA6 479 aa14.05□□□□□ -0.16
CHMP3-204ENST00000409727 MBOAT7Q96N66 472 aa14.05□□□□□ -0.16
CHMP3-204ENST00000409727 ACAD9Q9H845 621 aa14.05□□□□□ -0.16
CHMP3-204ENST00000409727 KCNMB3Q9NPA1 279 aa14.05□□□□□ -0.16
CHMP3-204ENST00000409727 HOOK1Q9UJC3 728 aaKnown RBP14.05□□□□□ -0.16
CHMP3-204ENST00000409727 CCL15-CCL14A0A0B4J2E2 113 aa14.04□□□□□ -0.16
CHMP3-204ENST00000409727 MSH4O15457 936 aa14.04□□□□□ -0.16
CHMP3-204ENST00000409727 SLFN14P0C7P3 912 aa14.04□□□□□ -0.16
CHMP3-204ENST00000409727 CYP2C8P10632 490 aa14.04□□□□□ -0.16
CHMP3-204ENST00000409727 CASP1P29466 404 aa14.04□□□□□ -0.16
CHMP3-204ENST00000409727 CIITAP33076 1130 aa14.04□□□□□ -0.16
CHMP3-204ENST00000409727 HUNKP57058 714 aa14.04□□□□□ -0.16
CHMP3-204ENST00000409727 PABPC4Q13310 644 aaKnown RBP eCLIP14.04□□□□□ -0.168e-8■□□□□ 10.9
CHMP3-204ENST00000409727 POSTNQ15063 836 aa14.04□□□□□ -0.16
CHMP3-204ENST00000409727 E2F4Q16254 413 aa14.04□□□□□ -0.16
CHMP3-204ENST00000409727 CCL15Q16663 113 aa14.04□□□□□ -0.16
CHMP3-204ENST00000409727 ARHGEF16Q5VV41 709 aa14.04□□□□□ -0.16
CHMP3-204ENST00000409727 RRAGBQ5VZM2 374 aa14.04□□□□□ -0.16
CHMP3-204ENST00000409727 NCAPG2Q86XI2 1143 aa14.04□□□□□ -0.16
CHMP3-204ENST00000409727 PLA2G4DQ86XP0 818 aa14.04□□□□□ -0.16
CHMP3-204ENST00000409727 ETNPPLQ8TBG4 499 aa14.04□□□□□ -0.16
CHMP3-204ENST00000409727 RMDN3Q96TC7 470 aa14.04□□□□□ -0.16
CHMP3-204ENST00000409727 RAB34Q9BZG1 259 aa14.04□□□□□ -0.16
CHMP3-204ENST00000409727 DNAJC25Q9H1X3 360 aa14.04□□□□□ -0.16
CHMP3-204ENST00000409727 TXNRD2Q9NNW7 524 aa14.04□□□□□ -0.16
CHMP3-204ENST00000409727 DISC1Q9NRI5 854 aa14.04□□□□□ -0.16
CHMP3-204ENST00000409727 CCDC39Q9UFE4 941 aa14.04□□□□□ -0.16
CHMP3-204ENST00000409727 RBBP6Q7Z6E9 1792 aaKnown RBP14.04□□□□□ -0.16
CHMP3-204ENST00000409727 IGLV3-22A0A075B6J6 115 aa14.04□□□□□ -0.16
CHMP3-204ENST00000409727 UNCXA6NJT0 531 aa14.04□□□□□ -0.16
CHMP3-204ENST00000409727 CETPP11597 493 aa14.04□□□□□ -0.16
CHMP3-204ENST00000409727 MYCLP12524 364 aaPredicted RBP14.04□□□□□ -0.16
CHMP3-204ENST00000409727 XRCC6P12956 609 aaKnown RBP eCLIP14.04□□□□□ -0.16
CHMP3-204ENST00000409727 GTF2A2P52657 109 aa14.04□□□□□ -0.16
CHMP3-204ENST00000409727 SLFN12Q8IYM2 578 aa14.04□□□□□ -0.16
CHMP3-204ENST00000409727 MB21D1Q8N884 522 aa14.04□□□□□ -0.16
CHMP3-204ENST00000409727 PAGE5Q96GU1 130 aa14.04□□□□□ -0.16
CHMP3-204ENST00000409727 CCSER1Q9C0I3 900 aa14.04□□□□□ -0.16
CHMP3-204ENST00000409727 SPATC1LQ9H0A9 340 aa14.04□□□□□ -0.16
CHMP3-204ENST00000409727 GPBP1L1Q9HC44 474 aaPredicted RBP14.04□□□□□ -0.16
CHMP3-204ENST00000409727 A1CFQ9NQ94 594 aaKnown RBP14.04□□□□□ -0.16
CHMP3-204ENST00000409727 PKD2L1Q9P0L9 805 aa14.04□□□□□ -0.16
CHMP3-204ENST00000409727 RPTORQ8N122 1335 aa14.03□□□□□ -0.16
CHMP3-204ENST00000409727 PLCG1P19174 1290 aa14.03□□□□□ -0.16
CHMP3-204ENST00000409727 MDM2Q00987 491 aaPredicted RBP14.03□□□□□ -0.16
CHMP3-204ENST00000409727 GHRHRQ02643 423 aa14.03□□□□□ -0.16
CHMP3-204ENST00000409727 STX1AQ16623 288 aa14.03□□□□□ -0.16
CHMP3-204ENST00000409727 TKFCQ3LXA3 575 aa14.03□□□□□ -0.16
CHMP3-204ENST00000409727 CEP55Q53EZ4 464 aa14.03□□□□□ -0.16
CHMP3-204ENST00000409727 SPRYD7Q5W111 196 aa14.03□□□□□ -0.16
CHMP3-204ENST00000409727 PDXDC2PQ6P474 469 aa14.03□□□□□ -0.16
CHMP3-204ENST00000409727 SNX29Q8TEQ0 813 aa14.03□□□□□ -0.16
CHMP3-204ENST00000409727 MS4A4AQ96JQ5 239 aa14.03□□□□□ -0.16
CHMP3-204ENST00000409727 NUDT12Q9BQG2 462 aa14.03□□□□□ -0.16
CHMP3-204ENST00000409727 MMTAG2Q9BU76 263 aaKnown RBP14.03□□□□□ -0.16
CHMP3-204ENST00000409727 MAP3K20Q9NYL2 800 aaKnown RBP14.03□□□□□ -0.16
CHMP3-204ENST00000409727 PCDHA5Q9Y5H7 936 aa14.03□□□□□ -0.16
CHMP3-204ENST00000409727 PDHXO00330 501 aa14.02□□□□□ -0.16
CHMP3-204ENST00000409727 CNMDO75829 334 aa14.02□□□□□ -0.16
CHMP3-204ENST00000409727 PDIA5Q14554 519 aa14.02□□□□□ -0.16
CHMP3-204ENST00000409727 PGM5Q15124 567 aa14.02□□□□□ -0.16
CHMP3-204ENST00000409727 KRT79Q5XKE5 535 aa14.02□□□□□ -0.16
CHMP3-204ENST00000409727 KANK3Q6NY19 840 aa14.02□□□□□ -0.16
CHMP3-204ENST00000409727 C11orf57Q6ZUT1 292 aaPredicted RBP14.02□□□□□ -0.16
CHMP3-204ENST00000409727 ANKRD35Q8N283 1001 aa14.02□□□□□ -0.16
CHMP3-204ENST00000409727 SMCR8Q8TEV9 937 aaPredicted RBP14.02□□□□□ -0.16
CHMP3-204ENST00000409727 BRI3BPQ8WY22 251 aa14.02□□□□□ -0.16
CHMP3-204ENST00000409727 CALML4Q96GE6 196 aa14.02□□□□□ -0.16
CHMP3-204ENST00000409727 CCDC34Q96HJ3 373 aa14.02□□□□□ -0.16
CHMP3-204ENST00000409727 CDK5RAP3Q96JB5 506 aa14.02□□□□□ -0.16
CHMP3-204ENST00000409727 PYM1Q9BRP8 204 aaKnown RBP14.02□□□□□ -0.16
CHMP3-204ENST00000409727 BLZF1Q9H2G9 400 aa14.02□□□□□ -0.16
CHMP3-204ENST00000409727 R3HDMLQ9H3Y0 253 aa14.02□□□□□ -0.16
CHMP3-204ENST00000409727 PXMP2Q9NR77 195 aa14.02□□□□□ -0.16
CHMP3-204ENST00000409727 CYP39A1Q9NYL5 469 aa14.02□□□□□ -0.16
CHMP3-204ENST00000409727 A0A0G2JMZ2 1700 aa14.02□□□□□ -0.17
CHMP3-204ENST00000409727 BTBD19C9JJ37 291 aa14.01□□□□□ -0.17
CHMP3-204ENST00000409727 ARP10275 920 aa14.01□□□□□ -0.17
CHMP3-204ENST00000409727 ITGB5P18084 799 aa14.01□□□□□ -0.17
CHMP3-204ENST00000409727 DHX8Q14562 1220 aaKnown RBP14.01□□□□□ -0.17
CHMP3-204ENST00000409727 DPCR1Q3MIW9 517 aa14.01□□□□□ -0.17
CHMP3-204ENST00000409727 NAALADL2Q58DX5 795 aa14.01□□□□□ -0.17
CHMP3-204ENST00000409727 WDR78Q5VTH9 848 aa14.01□□□□□ -0.17
CHMP3-204ENST00000409727 NCAPH2Q6IBW4 605 aa14.01□□□□□ -0.17
CHMP3-204ENST00000409727 RIOX2Q8IUF8 465 aa14.01□□□□□ -0.17
CHMP3-204ENST00000409727 CHST13Q8NET6 341 aa14.01□□□□□ -0.17
CHMP3-204ENST00000409727 LRRC15Q8TF66 581 aa14.01□□□□□ -0.17
CHMP3-204ENST00000409727 MXRA8Q9BRK3 442 aa14.01□□□□□ -0.17
CHMP3-204ENST00000409727 MOV10L1Q9BXT6 1211 aaKnown RBP14.01□□□□□ -0.17
CHMP3-204ENST00000409727 WDR11Q9BZH6 1224 aa14.01□□□□□ -0.17
CHMP3-204ENST00000409727 RBPJLQ9UBG7 517 aa14.01□□□□□ -0.17
CHMP3-204ENST00000409727 USP25Q9UHP3 1055 aa14.01□□□□□ -0.17
CHMP3-204ENST00000409727 TBX3O15119 743 aa14.01□□□□□ -0.17
CHMP3-204ENST00000409727 CHMP2AO43633 222 aa14.01□□□□□ -0.17
CHMP3-204ENST00000409727 ERCC3P19447 782 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms