RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 PCDHA5Q9Y5H7 936 aa6.33□□□□□ -1.4
PMS1-203ENST00000409593 KDM2BQ8NHM5 1336 aa6.32□□□□□ -1.4
PMS1-203ENST00000409593 BLACEA4D250 179 aa6.32□□□□□ -1.4
PMS1-203ENST00000409593 PFKLP17858 780 aa6.32□□□□□ -1.4
PMS1-203ENST00000409593 LSAMPQ13449 338 aa6.32□□□□□ -1.4
PMS1-203ENST00000409593 TESK1Q15569 626 aa6.32□□□□□ -1.4
PMS1-203ENST00000409593 IGDCC3Q8IVU1 814 aa6.32□□□□□ -1.4
PMS1-203ENST00000409593 OSBP2Q969R2 916 aa6.32□□□□□ -1.4
PMS1-203ENST00000409593 IPO9Q96P70 1041 aaKnown RBP6.32□□□□□ -1.4
PMS1-203ENST00000409593 IRF2BPLQ9H1B7 796 aa6.32□□□□□ -1.4
PMS1-203ENST00000409593 MROH9Q5TGP6 573 aa6.31□□□□□ -1.4
PMS1-203ENST00000409593 CILP2Q8IUL8 1156 aa6.31□□□□□ -1.4
PMS1-203ENST00000409593 TSPAN17Q96FV3 270 aa6.31□□□□□ -1.4
PMS1-203ENST00000409593 OSBPL2Q9H1P3 480 aa6.31□□□□□ -1.4
PMS1-203ENST00000409593 GPR27Q9NS67 375 aa6.31□□□□□ -1.4
PMS1-203ENST00000409593 FAN1Q9Y2M0 1017 aa6.31□□□□□ -1.4
PMS1-203ENST00000409593 NPFFR2Q9Y5X5 522 aa6.31□□□□□ -1.4
PMS1-203ENST00000409593 ADCY3O60266 1144 aa6.3□□□□□ -1.4
PMS1-203ENST00000409593 PMLP29590 882 aa6.3□□□□□ -1.4
PMS1-203ENST00000409593 LIMS1P48059 325 aa6.3□□□□□ -1.4
PMS1-203ENST00000409593 SLC9A5Q14940 896 aa6.3□□□□□ -1.4
PMS1-203ENST00000409593 TARBP2Q15633 366 aaKnown RBP6.3□□□□□ -1.4
PMS1-203ENST00000409593 ZNF385BQ569K4 471 aa6.3□□□□□ -1.4
PMS1-203ENST00000409593 KCNT2Q6UVM3 1135 aa6.3□□□□□ -1.4
PMS1-203ENST00000409593 DCAF4Q8WV16 495 aa6.3□□□□□ -1.4
PMS1-203ENST00000409593 DRC1Q96MC2 740 aa6.3□□□□□ -1.4
PMS1-203ENST00000409593 IRS4O14654 1257 aaPredicted RBP6.3□□□□□ -1.4
PMS1-203ENST00000409593 MSCO60682 206 aa6.3□□□□□ -1.4
PMS1-203ENST00000409593 ZBTB7AO95365 584 aa6.3□□□□□ -1.4
PMS1-203ENST00000409593 MC3RP41968 323 aa6.3□□□□□ -1.4
PMS1-203ENST00000409593 BMS1Q14692 1282 aaKnown RBP6.3□□□□□ -1.4
PMS1-203ENST00000409593 NTRK3Q16288 839 aa6.3□□□□□ -1.4
PMS1-203ENST00000409593 LRP10Q7Z4F1 713 aa6.3□□□□□ -1.4
PMS1-203ENST00000409593 RIOX2Q8IUF8 465 aa6.3□□□□□ -1.4
PMS1-203ENST00000409593 Q8N1Y9 231 aa6.3□□□□□ -1.4
PMS1-203ENST00000409593 ZBTB38Q8NAP3 1195 aaPredicted RBP6.3□□□□□ -1.4
PMS1-203ENST00000409593 PANK1Q8TE04 598 aa6.3□□□□□ -1.4
PMS1-203ENST00000409593 SEC14L1Q92503 715 aa6.3□□□□□ -1.4
PMS1-203ENST00000409593 DNAJC7Q99615 494 aa6.3□□□□□ -1.4
PMS1-203ENST00000409593 X6R8D5 127 aa6.3□□□□□ -1.4
PMS1-203ENST00000409593 TRBV23-1A0A0A0MS06 115 aa6.29□□□□□ -1.4
PMS1-203ENST00000409593 H7BY64 318 aa6.29□□□□□ -1.4
PMS1-203ENST00000409593 ASGR2P07307 311 aa6.29□□□□□ -1.4
PMS1-203ENST00000409593 FAM153BP0C7A2 387 aa6.29□□□□□ -1.4
PMS1-203ENST00000409593 NCAM1P13591 858 aa6.29□□□□□ -1.4
PMS1-203ENST00000409593 FAM209AQ5JX71 171 aa6.29□□□□□ -1.4
PMS1-203ENST00000409593 FOXB2Q5VYV0 432 aa6.29□□□□□ -1.4
PMS1-203ENST00000409593 CNKSR3Q6P9H4 555 aa6.29□□□□□ -1.4
PMS1-203ENST00000409593 PPARGC1AQ9UBK2 798 aaKnown RBP6.29□□□□□ -1.4
PMS1-203ENST00000409593 IRS2Q9Y4H2 1338 aa6.28□□□□□ -1.4
PMS1-203ENST00000409593 SGSM2O43147 1006 aa6.28□□□□□ -1.4
PMS1-203ENST00000409593 ZSCAN22P10073 491 aaPredicted RBP6.28□□□□□ -1.4
PMS1-203ENST00000409593 FBLN1P23142 703 aa6.28□□□□□ -1.4
PMS1-203ENST00000409593 SLC6A11P48066 632 aa6.28□□□□□ -1.4
PMS1-203ENST00000409593 RSPO2Q6UXX9 243 aaPredicted RBP6.28□□□□□ -1.4
PMS1-203ENST00000409593 MILR1Q7Z6M3 343 aa6.28□□□□□ -1.4
PMS1-203ENST00000409593 FAM129CQ86XR2 697 aa6.28□□□□□ -1.4
PMS1-203ENST00000409593 C1QL4Q86Z23 238 aa6.28□□□□□ -1.4
PMS1-203ENST00000409593 TMEFF1Q8IYR6 380 aa6.28□□□□□ -1.4
PMS1-203ENST00000409593 UBXN4Q92575 508 aa6.28□□□□□ -1.4
PMS1-203ENST00000409593 MKL1Q969V6 931 aa6.28□□□□□ -1.4
PMS1-203ENST00000409593 RNF38Q9H0F5 515 aa6.28□□□□□ -1.4
PMS1-203ENST00000409593 EPB41L1Q9H4G0 881 aa6.28□□□□□ -1.4
PMS1-203ENST00000409593 PALD1Q9ULE6 856 aa6.28□□□□□ -1.4
PMS1-203ENST00000409593 TRAF6Q9Y4K3 522 aa6.28□□□□□ -1.4
PMS1-203ENST00000409593 DGKIO75912 1065 aa6.27□□□□□ -1.41
PMS1-203ENST00000409593 ATF2P15336 505 aa6.27□□□□□ -1.41
PMS1-203ENST00000409593 SUMO1P63165 101 aaKnown RBP6.27□□□□□ -1.41
PMS1-203ENST00000409593 STYK1Q6J9G0 422 aa6.27□□□□□ -1.41
PMS1-203ENST00000409593 DPH6Q7L8W6 267 aa6.27□□□□□ -1.41
PMS1-203ENST00000409593 AMIGO3Q86WK7 504 aa6.27□□□□□ -1.41
PMS1-203ENST00000409593 SCUBE1Q8IWY4 988 aa6.27□□□□□ -1.41
PMS1-203ENST00000409593 EXOC2Q96KP1 924 aa6.27□□□□□ -1.41
PMS1-203ENST00000409593 JAM3Q9BX67 310 aa6.27□□□□□ -1.41
PMS1-203ENST00000409593 EPB41L4AQ9HCS5 686 aaPredicted RBP6.27□□□□□ -1.41
PMS1-203ENST00000409593 IGFBP6P24592 240 aaPredicted RBP6.26□□□□□ -1.41
PMS1-203ENST00000409593 GRK2P25098 689 aa6.26□□□□□ -1.41
PMS1-203ENST00000409593 GRK3P35626 688 aa6.26□□□□□ -1.41
PMS1-203ENST00000409593 AFF3P51826 1226 aaKnown RBP6.26□□□□□ -1.41
PMS1-203ENST00000409593 CHRNA2Q15822 529 aa6.26□□□□□ -1.41
PMS1-203ENST00000409593 TCERG1LQ5VWI1 586 aa6.26□□□□□ -1.41
PMS1-203ENST00000409593 STEAP3Q658P3 488 aa6.26□□□□□ -1.41
PMS1-203ENST00000409593 IFNL3Q8IZI9 196 aa6.26□□□□□ -1.41
PMS1-203ENST00000409593 PWWP2AQ96N64 755 aa6.26□□□□□ -1.41
PMS1-203ENST00000409593 CDK11AQ9UQ88 783 aaPredicted RBP6.26□□□□□ -1.41
PMS1-203ENST00000409593 ASXL2Q76L83 1435 aa6.26□□□□□ -1.41
PMS1-203ENST00000409593 GPR85P60893 370 aa6.26□□□□□ -1.41
PMS1-203ENST00000409593 FOXO4P98177 505 aa6.26□□□□□ -1.41
PMS1-203ENST00000409593 NFE2L2Q16236 605 aa6.26□□□□□ -1.41
PMS1-203ENST00000409593 KIZQ2M2Z5 673 aa6.26□□□□□ -1.41
PMS1-203ENST00000409593 LBX2Q6XYB7 198 aa6.26□□□□□ -1.41
PMS1-203ENST00000409593 ETV3LQ6ZN32 361 aa6.26□□□□□ -1.41
PMS1-203ENST00000409593 MTDHQ86UE4 582 aaKnown RBP6.26□□□□□ -1.41
PMS1-203ENST00000409593 TMEM151BQ8IW70 566 aa6.26□□□□□ -1.41
PMS1-203ENST00000409593 ZFYVE21Q9BQ24 234 aa6.26□□□□□ -1.41
PMS1-203ENST00000409593 YIPF4Q9BSR8 244 aa6.26□□□□□ -1.41
PMS1-203ENST00000409593 ALG1Q9BT22 464 aa6.26□□□□□ -1.41
PMS1-203ENST00000409593 ZSWIM4Q9H7M6 989 aa6.26□□□□□ -1.41
PMS1-203ENST00000409593 MRPS23Q9Y3D9 190 aaKnown RBP6.26□□□□□ -1.41
PMS1-203ENST00000409593 HGSO14964 777 aaPredicted RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms