RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 GLE1Q53GS7 698 aaKnown RBP17.1■□□□□ 0.33
LIMS2-205ENST00000409455 NFRKBQ6P4R8 1299 aa17.1■□□□□ 0.33
LIMS2-205ENST00000409455 IFT20Q8IY31 132 aa17.1■□□□□ 0.33
LIMS2-205ENST00000409455 CSGALNACT2Q8N6G5 542 aa17.1■□□□□ 0.33
LIMS2-205ENST00000409455 ESR2Q92731 530 aa17.1■□□□□ 0.33
LIMS2-205ENST00000409455 RNPC3Q96LT9 517 aaKnown RBP17.1■□□□□ 0.33
LIMS2-205ENST00000409455 MYH2Q9UKX2 1941 aa17.1■□□□□ 0.33
LIMS2-205ENST00000409455 RIMBP2O15034 1052 aa17.1■□□□□ 0.33
LIMS2-205ENST00000409455 PPP1R37O75864 691 aa17.1■□□□□ 0.33
LIMS2-205ENST00000409455 MOCS3O95396 460 aa17.1■□□□□ 0.33
LIMS2-205ENST00000409455 LONP1P36776 959 aaKnown RBP17.1■□□□□ 0.33
LIMS2-205ENST00000409455 KLK7P49862 253 aa17.1■□□□□ 0.33
LIMS2-205ENST00000409455 NEDD9Q14511 834 aa17.1■□□□□ 0.33
LIMS2-205ENST00000409455 PLCB4Q15147 1175 aa17.1■□□□□ 0.33
LIMS2-205ENST00000409455 RASSF8Q8NHQ8 419 aa17.1■□□□□ 0.33
LIMS2-205ENST00000409455 ZNF473Q8WTR7 871 aaKnown RBP17.1■□□□□ 0.33
LIMS2-205ENST00000409455 CCDC43Q96MW1 224 aaKnown RBP17.1■□□□□ 0.33
LIMS2-205ENST00000409455 PSMB7Q99436 277 aa17.1■□□□□ 0.33
LIMS2-205ENST00000409455 VCPKMTQ9H867 229 aa17.1■□□□□ 0.33
LIMS2-205ENST00000409455 RBM28Q9NW13 759 aaKnown RBP17.1■□□□□ 0.33
LIMS2-205ENST00000409455 RGPD3A6NKT7 1758 aaPredicted RBP17.09■□□□□ 0.33
LIMS2-205ENST00000409455 RGPD4Q7Z3J3 1758 aa17.09■□□□□ 0.33
LIMS2-205ENST00000409455 A0A1W2PQJ5 194 aa17.09■□□□□ 0.33
LIMS2-205ENST00000409455 NR1D1P20393 614 aa17.09■□□□□ 0.33
LIMS2-205ENST00000409455 CXCR5P32302 372 aa17.09■□□□□ 0.33
LIMS2-205ENST00000409455 GUCY1A3Q02108 690 aa17.09■□□□□ 0.33
LIMS2-205ENST00000409455 FUT2Q10981 343 aa17.09■□□□□ 0.33
LIMS2-205ENST00000409455 KCNB1Q14721 858 aa17.09■□□□□ 0.33
LIMS2-205ENST00000409455 SEC23AQ15436 765 aa17.09■□□□□ 0.33
LIMS2-205ENST00000409455 PIK3AP1Q6ZUJ8 805 aa17.09■□□□□ 0.33
LIMS2-205ENST00000409455 KRT26Q7Z3Y9 468 aa17.09■□□□□ 0.33
LIMS2-205ENST00000409455 CATIPQ7Z7H3 387 aa17.09■□□□□ 0.33
LIMS2-205ENST00000409455 PCDHA13Q9Y5I0 950 aa17.09■□□□□ 0.33
LIMS2-205ENST00000409455 ZNF263O14978 683 aa17.09■□□□□ 0.33
LIMS2-205ENST00000409455 PLEKHA8P1O95397 391 aa17.09■□□□□ 0.33
LIMS2-205ENST00000409455 IL17AQ16552 155 aa17.09■□□□□ 0.33
LIMS2-205ENST00000409455 C2CD5Q86YS7 1000 aa17.09■□□□□ 0.33
LIMS2-205ENST00000409455 FAM114A1Q8IWE2 563 aa17.09■□□□□ 0.33
LIMS2-205ENST00000409455 MLXIPQ9HAP2 919 aa17.09■□□□□ 0.33
LIMS2-205ENST00000409455 DISC1Q9NRI5 854 aa17.09■□□□□ 0.33
LIMS2-205ENST00000409455 CYP2D7A0A087X1C5 515 aa17.08■□□□□ 0.33
LIMS2-205ENST00000409455 RASSF10A6NK89 507 aa17.08■□□□□ 0.33
LIMS2-205ENST00000409455 BAG6P46379 1132 aa17.08■□□□□ 0.33
LIMS2-205ENST00000409455 CDR1P51861 262 aa17.08■□□□□ 0.33
LIMS2-205ENST00000409455 SMTNP53814 917 aa17.08■□□□□ 0.33
LIMS2-205ENST00000409455 DIXDC1Q155Q3 683 aa17.08■□□□□ 0.33
LIMS2-205ENST00000409455 NPY5RQ15761 445 aa17.08■□□□□ 0.33
LIMS2-205ENST00000409455 PTGISQ16647 500 aa17.08■□□□□ 0.33
LIMS2-205ENST00000409455 FIGNQ5HY92 759 aa17.08■□□□□ 0.33
LIMS2-205ENST00000409455 ARL6IP4Q66PJ3 421 aaKnown RBP17.08■□□□□ 0.33
LIMS2-205ENST00000409455 TTI2Q6NXR4 508 aa17.08■□□□□ 0.33
LIMS2-205ENST00000409455 ZKSCAN4Q969J2 545 aaPredicted RBP17.08■□□□□ 0.33
LIMS2-205ENST00000409455 IQCDQ96DY2 449 aa17.08■□□□□ 0.33
LIMS2-205ENST00000409455 CD248Q9HCU0 757 aa17.08■□□□□ 0.33
LIMS2-205ENST00000409455 KLC4Q9NSK0 619 aa17.08■□□□□ 0.33
LIMS2-205ENST00000409455 CLSTN1O94985 981 aa17.08■□□□□ 0.32
LIMS2-205ENST00000409455 ACTN3Q08043 901 aaPredicted RBP17.08■□□□□ 0.32
LIMS2-205ENST00000409455 PAK2Q13177 524 aa17.08■□□□□ 0.32
LIMS2-205ENST00000409455 CCDC40Q4G0X9 1142 aa17.08■□□□□ 0.32
LIMS2-205ENST00000409455 FKBP15Q5T1M5 1219 aa17.08■□□□□ 0.32
LIMS2-205ENST00000409455 EMC10Q5UCC4 262 aa17.08■□□□□ 0.32
LIMS2-205ENST00000409455 CCDC155Q8N6L0 562 aa17.08■□□□□ 0.32
LIMS2-205ENST00000409455 SMARCAL1Q9NZC9 954 aa17.08■□□□□ 0.32
LIMS2-205ENST00000409455 GGA2Q9UJY4 613 aa17.08■□□□□ 0.32
LIMS2-205ENST00000409455 ZNF233A6NK53 670 aa17.07■□□□□ 0.32
LIMS2-205ENST00000409455 H0YIN7 160 aa17.07■□□□□ 0.32
LIMS2-205ENST00000409455 CLGNO14967 610 aa17.07■□□□□ 0.32
LIMS2-205ENST00000409455 MYL1P05976 194 aa17.07■□□□□ 0.32
LIMS2-205ENST00000409455 MTIF2P46199 727 aaKnown RBP17.07■□□□□ 0.32
LIMS2-205ENST00000409455 IFIT1BQ5T764 474 aaKnown RBP17.07■□□□□ 0.32
LIMS2-205ENST00000409455 TYW1BQ6NUM6 668 aa17.07■□□□□ 0.32
LIMS2-205ENST00000409455 NLRP14Q86W24 1093 aa17.07■□□□□ 0.32
LIMS2-205ENST00000409455 CCDC13Q8IYE1 715 aa17.07■□□□□ 0.32
LIMS2-205ENST00000409455 IQCKQ8N0W5 287 aa17.07■□□□□ 0.32
LIMS2-205ENST00000409455 NOC4LQ9BVI4 516 aaKnown RBP17.07■□□□□ 0.32
LIMS2-205ENST00000409455 RBM12Q9NTZ6 932 aaKnown RBP17.07■□□□□ 0.32
LIMS2-205ENST00000409455 BICDL2A1A5D9 508 aa17.07■□□□□ 0.32
LIMS2-205ENST00000409455 USP17L12C9JPN9 530 aa17.07■□□□□ 0.32
LIMS2-205ENST00000409455 USP17L21D6R901 530 aa17.07■□□□□ 0.32
LIMS2-205ENST00000409455 C21orf2O43822 256 aa17.07■□□□□ 0.32
LIMS2-205ENST00000409455 CHRNA5P30532 468 aa17.07■□□□□ 0.32
LIMS2-205ENST00000409455 KIF11P52732 1056 aa17.07■□□□□ 0.32
LIMS2-205ENST00000409455 TMED8Q6PL24 325 aaPredicted RBP17.07■□□□□ 0.32
LIMS2-205ENST00000409455 DPP8Q6V1X1 898 aaPredicted RBP17.07■□□□□ 0.32
LIMS2-205ENST00000409455 ENAHQ8N8S7 591 aaPredicted RBP17.07■□□□□ 0.32
LIMS2-205ENST00000409455 GIMAP8Q8ND71 665 aaPredicted RBP17.07■□□□□ 0.32
LIMS2-205ENST00000409455 BANK1Q8NDB2 785 aa17.07■□□□□ 0.32
LIMS2-205ENST00000409455 MYCBPAPQ8TBZ2 947 aa17.07■□□□□ 0.32
LIMS2-205ENST00000409455 DHTKD1Q96HY7 919 aaPredicted RBP17.07■□□□□ 0.32
LIMS2-205ENST00000409455 CNOT6LQ96LI5 555 aaKnown RBP17.07■□□□□ 0.32
LIMS2-205ENST00000409455 CCT8L2Q96SF2 557 aa17.07■□□□□ 0.32
LIMS2-205ENST00000409455 CRNKL1Q9BZJ0 848 aaKnown RBP17.07■□□□□ 0.32
LIMS2-205ENST00000409455 ZC3H12CQ9C0D7 883 aaKnown RBP17.07■□□□□ 0.32
LIMS2-205ENST00000409455 DCP1AQ9NPI6 582 aaPredicted RBP17.07■□□□□ 0.32
LIMS2-205ENST00000409455 EHD2Q9NZN4 543 aa17.07■□□□□ 0.32
LIMS2-205ENST00000409455 ANAPC4Q9UJX5 808 aa17.07■□□□□ 0.32
LIMS2-205ENST00000409455 RHOBTB3O94955 611 aa17.06■□□□□ 0.32
LIMS2-205ENST00000409455 FAM107AO95990 144 aa17.06■□□□□ 0.32
LIMS2-205ENST00000409455 PLEKP08567 350 aaPredicted RBP17.06■□□□□ 0.32
LIMS2-205ENST00000409455 CALM1P0DP23 149 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms