RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 AKR1A1P14550 325 aa8.03□□□□□ -1.12
SCN9A-202ENST00000409435 DHX32Q7L7V1 743 aaKnown RBP8.03□□□□□ -1.12
SCN9A-202ENST00000409435 GBP5Q96PP8 586 aa8.03□□□□□ -1.12
SCN9A-202ENST00000409435 ANKFY1Q9P2R3 1169 aa8.03□□□□□ -1.12
SCN9A-202ENST00000409435 MAP3K7O43318 606 aa8.03□□□□□ -1.12
SCN9A-202ENST00000409435 AOC2O75106 756 aa8.03□□□□□ -1.12
SCN9A-202ENST00000409435 CABYRO75952 493 aa8.03□□□□□ -1.12
SCN9A-202ENST00000409435 RPLP2P05387 115 aaKnown RBP8.03□□□□□ -1.12
SCN9A-202ENST00000409435 PRDX5P30044 214 aa8.03□□□□□ -1.12
SCN9A-202ENST00000409435 THPOP40225 353 aa8.03□□□□□ -1.12
SCN9A-202ENST00000409435 PPIGQ13427 754 aaKnown RBP eCLIP8.03□□□□□ -1.121e-6■■□□□ 11.6
SCN9A-202ENST00000409435 ARFGAP2Q8N6H7 521 aa8.03□□□□□ -1.12
SCN9A-202ENST00000409435 STAG1Q8WVM7 1258 aa8.03□□□□□ -1.12
SCN9A-202ENST00000409435 COL5A2P05997 1499 aaPredicted RBP8.02□□□□□ -1.12
SCN9A-202ENST00000409435 H7C1W4 665 aa8.02□□□□□ -1.13
SCN9A-202ENST00000409435 EEF2P13639 858 aaKnown RBP8.02□□□□□ -1.13
SCN9A-202ENST00000409435 CPB1P15086 417 aa8.02□□□□□ -1.13
SCN9A-202ENST00000409435 ATP5JP18859 108 aa8.02□□□□□ -1.13
SCN9A-202ENST00000409435 NNMTP40261 264 aa8.02□□□□□ -1.13
SCN9A-202ENST00000409435 PHKA2P46019 1235 aa8.02□□□□□ -1.13
SCN9A-202ENST00000409435 TSPY1Q01534 308 aa8.02□□□□□ -1.13
SCN9A-202ENST00000409435 DYNLL2Q96FJ2 89 aa8.02□□□□□ -1.13
SCN9A-202ENST00000409435 WNK4Q96J92 1243 aa8.02□□□□□ -1.13
SCN9A-202ENST00000409435 CHAMP1Q96JM3 812 aa8.02□□□□□ -1.13
SCN9A-202ENST00000409435 CEP170P1Q96L14 293 aa8.02□□□□□ -1.13
SCN9A-202ENST00000409435 TRIM4Q9C037 500 aa8.02□□□□□ -1.13
SCN9A-202ENST00000409435 K7ELQ4 463 aaPredicted RBP8.02□□□□□ -1.13
SCN9A-202ENST00000409435 CEP104O60308 925 aa8.02□□□□□ -1.13
SCN9A-202ENST00000409435 TADA2AO75478 443 aa8.02□□□□□ -1.13
SCN9A-202ENST00000409435 RPS6KA5O75582 802 aa8.02□□□□□ -1.13
SCN9A-202ENST00000409435 CIB2O75838 187 aa8.02□□□□□ -1.13
SCN9A-202ENST00000409435 HMGCRP04035 888 aa8.02□□□□□ -1.13
SCN9A-202ENST00000409435 TNNC1P63316 161 aa8.02□□□□□ -1.13
SCN9A-202ENST00000409435 MCM6Q14566 821 aa8.02□□□□□ -1.13
SCN9A-202ENST00000409435 LRRC23Q53EV4 343 aaPredicted RBP8.02□□□□□ -1.13
SCN9A-202ENST00000409435 RCSD1Q6JBY9 416 aa8.02□□□□□ -1.13
SCN9A-202ENST00000409435 TOPORSQ9NS56 1045 aaPredicted RBP8.02□□□□□ -1.13
SCN9A-202ENST00000409435 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.02□□□□□ -1.134e-6■■■□□ 17.6
SCN9A-202ENST00000409435 LAMC1P11047 1609 aa8.02□□□□□ -1.13
SCN9A-202ENST00000409435 PPRC1Q5VV67 1664 aaKnown RBP8.02□□□□□ -1.13
SCN9A-202ENST00000409435 SPDYE2BA6NHP3 402 aa8.02□□□□□ -1.13
SCN9A-202ENST00000409435 NTSR2O95665 410 aa8.02□□□□□ -1.13
SCN9A-202ENST00000409435 SPDYE6P0CI01 402 aa8.02□□□□□ -1.13
SCN9A-202ENST00000409435 TUBB4BP68371 445 aa8.02□□□□□ -1.13
SCN9A-202ENST00000409435 PPFIA1Q13136 1202 aa8.02□□□□□ -1.13
SCN9A-202ENST00000409435 TTC22Q5TAA0 569 aa8.02□□□□□ -1.13
SCN9A-202ENST00000409435 ZNF449Q6P9G9 518 aa8.02□□□□□ -1.13
SCN9A-202ENST00000409435 TDRD7Q8NHU6 1098 aaKnown RBP8.02□□□□□ -1.13
SCN9A-202ENST00000409435 PPP1R14CQ8TAE6 165 aa8.02□□□□□ -1.13
SCN9A-202ENST00000409435 SNX29Q8TEQ0 813 aa8.02□□□□□ -1.13
SCN9A-202ENST00000409435 WDR11Q9BZH6 1224 aa8.02□□□□□ -1.13
SCN9A-202ENST00000409435 CALUO43852 315 aaPredicted RBP8.02□□□□□ -1.13
SCN9A-202ENST00000409435 EPB41P11171 864 aaKnown RBP8.02□□□□□ -1.13
SCN9A-202ENST00000409435 CD19P15391 556 aa8.02□□□□□ -1.13
SCN9A-202ENST00000409435 INPP5BP32019 993 aa8.02□□□□□ -1.13
SCN9A-202ENST00000409435 NDUFV1P49821 464 aa8.02□□□□□ -1.13
SCN9A-202ENST00000409435 PTPN12Q05209 780 aaKnown RBP8.02□□□□□ -1.13
SCN9A-202ENST00000409435 TDRD12Q587J7 1177 aaKnown RBP8.02□□□□□ -1.13
SCN9A-202ENST00000409435 BTBD8Q5XKL5 378 aa8.02□□□□□ -1.13
SCN9A-202ENST00000409435 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.02□□□□□ -1.13
SCN9A-202ENST00000409435 ISCA1Q9BUE6 129 aa8.02□□□□□ -1.13
SCN9A-202ENST00000409435 TRIM7Q9C029 511 aa8.02□□□□□ -1.13
SCN9A-202ENST00000409435 LRWD1Q9UFC0 647 aa8.02□□□□□ -1.13
SCN9A-202ENST00000409435 HCN4Q9Y3Q4 1203 aa8.02□□□□□ -1.13
SCN9A-202ENST00000409435 SYCE3A1L190 88 aa8.01□□□□□ -1.13
SCN9A-202ENST00000409435 TUBB4AP04350 444 aa8.01□□□□□ -1.13
SCN9A-202ENST00000409435 GJB1P08034 283 aa8.01□□□□□ -1.13
SCN9A-202ENST00000409435 NFKBIAP25963 317 aa8.01□□□□□ -1.13
SCN9A-202ENST00000409435 PLCD1P51178 756 aa8.01□□□□□ -1.13
SCN9A-202ENST00000409435 SNAP25P60880 206 aa8.01□□□□□ -1.13
SCN9A-202ENST00000409435 CDC42EP5Q6NZY7 148 aa8.01□□□□□ -1.13
SCN9A-202ENST00000409435 FERMT3Q86UX7 667 aa8.01□□□□□ -1.13
SCN9A-202ENST00000409435 HESX1Q9UBX0 185 aa8.01□□□□□ -1.13
SCN9A-202ENST00000409435 DAGLAQ9Y4D2 1042 aa8.01□□□□□ -1.13
SCN9A-202ENST00000409435 DLC1Q96QB1 1528 aa8.01□□□□□ -1.13
SCN9A-202ENST00000409435 A0A1W2PRG0 241 aa8.01□□□□□ -1.13
SCN9A-202ENST00000409435 PRRG1O14668 218 aa8.01□□□□□ -1.13
SCN9A-202ENST00000409435 LRG1P02750 347 aa8.01□□□□□ -1.13
SCN9A-202ENST00000409435 SRGAP2CP0DJJ0 459 aa8.01□□□□□ -1.13
SCN9A-202ENST00000409435 ABCD1P33897 745 aa8.01□□□□□ -1.13
SCN9A-202ENST00000409435 NR1H3Q13133 447 aa8.01□□□□□ -1.13
SCN9A-202ENST00000409435 CNPY4Q8N129 248 aa8.01□□□□□ -1.13
SCN9A-202ENST00000409435 SAMD15Q9P1V8 674 aa8.01□□□□□ -1.13
SCN9A-202ENST00000409435 C3P01024 1663 aa8.01□□□□□ -1.13
SCN9A-202ENST00000409435 UTYO14607 1347 aa8.01□□□□□ -1.13
SCN9A-202ENST00000409435 PHLPP2Q6ZVD8 1323 aa8.01□□□□□ -1.13
SCN9A-202ENST00000409435 CROCC2H7BZ55 1655 aa8.01□□□□□ -1.13
SCN9A-202ENST00000409435 STRNO43815 780 aa8.01□□□□□ -1.13
SCN9A-202ENST00000409435 DDAH1O94760 285 aa8.01□□□□□ -1.13
SCN9A-202ENST00000409435 IKBKEQ14164 716 aa8.01□□□□□ -1.13
SCN9A-202ENST00000409435 CEP68Q76N32 757 aa8.01□□□□□ -1.13
SCN9A-202ENST00000409435 LEO1Q8WVC0 666 aaPredicted RBP8.01□□□□□ -1.13
SCN9A-202ENST00000409435 MRFAP1L1Q96HT8 127 aa8.01□□□□□ -1.13
SCN9A-202ENST00000409435 ANKRD36BP1Q96IX9 119 aa8.01□□□□□ -1.13
SCN9A-202ENST00000409435 TSNARE1Q96NA8 513 aa8.01□□□□□ -1.13
SCN9A-202ENST00000409435 COPRSQ9NQ92 184 aa8.01□□□□□ -1.13
SCN9A-202ENST00000409435 GLB1LQ6UWU2 654 aa8.01□□□□□ -1.13
SCN9A-202ENST00000409435 PHLDB2Q86SQ0 1253 aa8.01□□□□□ -1.13
SCN9A-202ENST00000409435 PIK3R5Q8WYR1 880 aa8.01□□□□□ -1.13
SCN9A-202ENST00000409435 KIFAP3Q92845 792 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms