RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 COL4A6Q14031 1691 aa15.2■□□□□ 0.02
CHRNA1-203ENST00000409219 RNF113AO15541 343 aaKnown RBP15.2■□□□□ 0.02
CHRNA1-203ENST00000409219 RPS6P62753 249 aaKnown RBP15.2■□□□□ 0.02
CHRNA1-203ENST00000409219 PPARAQ07869 468 aa15.2■□□□□ 0.02
CHRNA1-203ENST00000409219 PTPROQ16827 1216 aa15.2■□□□□ 0.02
CHRNA1-203ENST00000409219 EPC2Q52LR7 807 aa15.2■□□□□ 0.02
CHRNA1-203ENST00000409219 TCEAL5Q5H9L2 206 aa15.2■□□□□ 0.02
CHRNA1-203ENST00000409219 PPP4R3BQ5MIZ7 849 aa15.2■□□□□ 0.02
CHRNA1-203ENST00000409219 RNF207Q6ZRF8 634 aa15.2■□□□□ 0.02
CHRNA1-203ENST00000409219 BANK1Q8NDB2 785 aa15.2■□□□□ 0.02
CHRNA1-203ENST00000409219 PRSS33Q8NF86 280 aa15.2■□□□□ 0.02
CHRNA1-203ENST00000409219 DNERQ8NFT8 737 aa15.2■□□□□ 0.02
CHRNA1-203ENST00000409219 WNT8BQ93098 351 aa15.2■□□□□ 0.02
CHRNA1-203ENST00000409219 FAM50BQ9Y247 325 aa15.2■□□□□ 0.02
CHRNA1-203ENST00000409219 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.2■□□□□ 0.02
CHRNA1-203ENST00000409219 KIAA1217Q5T5P2 1943 aa15.19■□□□□ 0.02
CHRNA1-203ENST00000409219 RALGAPA2Q2PPJ7 1873 aa15.19■□□□□ 0.02
CHRNA1-203ENST00000409219 PATL2C9JE40 543 aaKnown RBP15.19■□□□□ 0.02
CHRNA1-203ENST00000409219 TRIM71Q2Q1W2 868 aaKnown RBP15.19■□□□□ 0.02
CHRNA1-203ENST00000409219 ZNF618Q5T7W0 954 aa15.19■□□□□ 0.02
CHRNA1-203ENST00000409219 SYDE2Q5VT97 1194 aa15.19■□□□□ 0.02
CHRNA1-203ENST00000409219 CCDC62Q6P9F0 684 aa15.19■□□□□ 0.02
CHRNA1-203ENST00000409219 BTNL9Q6UXG8 535 aa15.19■□□□□ 0.02
CHRNA1-203ENST00000409219 EP400NLQ6ZTU2 488 aa15.19■□□□□ 0.02
CHRNA1-203ENST00000409219 MFSD14AQ96MC6 490 aa15.19■□□□□ 0.02
CHRNA1-203ENST00000409219 MPHOSPH6Q99547 160 aaKnown RBP15.19■□□□□ 0.02
CHRNA1-203ENST00000409219 MUTYHQ9UIF7 546 aa15.19■□□□□ 0.02
CHRNA1-203ENST00000409219 MYO15AQ9UKN7 3530 aa15.19■□□□□ 0.02
CHRNA1-203ENST00000409219 TSPY2A6NKD2 308 aa15.18■□□□□ 0.02
CHRNA1-203ENST00000409219 SMARCA5O60264 1052 aaPredicted RBP15.18■□□□□ 0.02
CHRNA1-203ENST00000409219 ZFYP08048 801 aaPredicted RBP15.18■□□□□ 0.02
CHRNA1-203ENST00000409219 ARHGAP1Q07960 439 aa15.18■□□□□ 0.02
CHRNA1-203ENST00000409219 MYOCDQ8IZQ8 938 aa15.18■□□□□ 0.02
CHRNA1-203ENST00000409219 DCAF4Q8WV16 495 aa15.18■□□□□ 0.02
CHRNA1-203ENST00000409219 SAMD11Q96NU1 681 aa15.18■□□□□ 0.02
CHRNA1-203ENST00000409219 SEC62Q99442 399 aaKnown RBP15.18■□□□□ 0.02
CHRNA1-203ENST00000409219 NAPBQ9H115 298 aa15.18■□□□□ 0.02
CHRNA1-203ENST00000409219 ECHDC1Q9NTX5 307 aa15.18■□□□□ 0.02
CHRNA1-203ENST00000409219 CLDND1Q9NY35 253 aa15.18■□□□□ 0.02
CHRNA1-203ENST00000409219 HDAC6Q9UBN7 1215 aa15.18■□□□□ 0.02
CHRNA1-203ENST00000409219 KMT2EQ8IZD2 1858 aa15.17■□□□□ 0.02
CHRNA1-203ENST00000409219 H3BNC9 293 aa15.17■□□□□ 0.02
CHRNA1-203ENST00000409219 LGR5O75473 907 aa15.17■□□□□ 0.02
CHRNA1-203ENST00000409219 GH1P01241 217 aa15.17■□□□□ 0.02
CHRNA1-203ENST00000409219 SLC3A2P08195 630 aaKnown RBP15.17■□□□□ 0.02
CHRNA1-203ENST00000409219 NOVP48745 357 aa15.17■□□□□ 0.02
CHRNA1-203ENST00000409219 HERC4Q5GLZ8 1057 aaPredicted RBP15.17■□□□□ 0.02
CHRNA1-203ENST00000409219 UPF3BQ9BZI7 483 aaKnown RBP15.17■□□□□ 0.02
CHRNA1-203ENST00000409219 NACAP1Q9BZK3 213 aa15.17■□□□□ 0.02
CHRNA1-203ENST00000409219 LRRCC1Q9C099 1032 aa15.17■□□□□ 0.02
CHRNA1-203ENST00000409219 NSUN3Q9H649 340 aaKnown RBP15.17■□□□□ 0.02
CHRNA1-203ENST00000409219 ZBTB40Q9NUA8 1239 aa15.17■□□□□ 0.02
CHRNA1-203ENST00000409219 ZDBF2Q9HCK1 2354 aa15.17■□□□□ 0.02
CHRNA1-203ENST00000409219 FRMPD2Q68DX3 1309 aaPredicted RBP15.16■□□□□ 0.02
CHRNA1-203ENST00000409219 ST18O60284 1047 aa15.16■□□□□ 0.02
CHRNA1-203ENST00000409219 AMHP03971 560 aa15.16■□□□□ 0.02
CHRNA1-203ENST00000409219 CASTP20810 708 aaKnown RBP15.16■□□□□ 0.02
CHRNA1-203ENST00000409219 LTBRP36941 435 aa15.16■□□□□ 0.02
CHRNA1-203ENST00000409219 PTK7Q13308 1070 aa15.16■□□□□ 0.02
CHRNA1-203ENST00000409219 GPM6BQ13491 265 aa15.16■□□□□ 0.02
CHRNA1-203ENST00000409219 SMAD2Q15796 467 aaKnown RBP15.16■□□□□ 0.02
CHRNA1-203ENST00000409219 LY6KQ17RY6 165 aa15.16■□□□□ 0.02
CHRNA1-203ENST00000409219 TSHZ3Q63HK5 1081 aa15.16■□□□□ 0.02
CHRNA1-203ENST00000409219 CHST3Q7LGC8 479 aa15.16■□□□□ 0.02
CHRNA1-203ENST00000409219 RPAINQ86UA6 219 aa15.16■□□□□ 0.02
CHRNA1-203ENST00000409219 C7orf31Q8N865 590 aa15.16■□□□□ 0.02
CHRNA1-203ENST00000409219 DBF4BQ8NFT6 615 aa15.16■□□□□ 0.02
CHRNA1-203ENST00000409219 INCENPQ9NQS7 918 aa15.16■□□□□ 0.02
CHRNA1-203ENST00000409219 PSEN2P49810 448 aa15.15■□□□□ 0.02
CHRNA1-203ENST00000409219 CTDSPL2Q05D32 466 aa15.15■□□□□ 0.02
CHRNA1-203ENST00000409219 IER5LQ5T953 404 aa15.15■□□□□ 0.02
CHRNA1-203ENST00000409219 FBXO11Q86XK2 927 aa15.15■□□□□ 0.02
CHRNA1-203ENST00000409219 ALG1Q9BT22 464 aa15.15■□□□□ 0.02
CHRNA1-203ENST00000409219 WDR19Q8NEZ3 1342 aa15.15■□□□□ 0.02
CHRNA1-203ENST00000409219 FOXP2O15409 715 aa15.14■□□□□ 0.01
CHRNA1-203ENST00000409219 F2P00734 622 aa15.14■□□□□ 0.01
CHRNA1-203ENST00000409219 ZNF286BP0CG31 522 aa15.14■□□□□ 0.01
CHRNA1-203ENST00000409219 PTPN5P54829 565 aa15.14■□□□□ 0.01
CHRNA1-203ENST00000409219 ZNF200P98182 395 aaPredicted RBP15.14■□□□□ 0.01
CHRNA1-203ENST00000409219 DLX2Q07687 328 aaPredicted RBP15.14■□□□□ 0.01
CHRNA1-203ENST00000409219 SEPT14Q6ZU15 432 aa15.14■□□□□ 0.01
CHRNA1-203ENST00000409219 RNF135Q8IUD6 432 aa15.14■□□□□ 0.01
CHRNA1-203ENST00000409219 TMEM192Q8IY95 271 aa15.14■□□□□ 0.01
CHRNA1-203ENST00000409219 GPCPD1Q9NPB8 672 aa15.14■□□□□ 0.01
CHRNA1-203ENST00000409219 EMSYQ7Z589 1322 aa15.14■□□□□ 0.01
CHRNA1-203ENST00000409219 B4DLN1 442 aa15.14■□□□□ 0.01
CHRNA1-203ENST00000409219 HAS3O00219 553 aa15.14■□□□□ 0.01
CHRNA1-203ENST00000409219 MBTPS2O43462 519 aa15.14■□□□□ 0.01
CHRNA1-203ENST00000409219 MRPL12P52815 198 aaKnown RBP15.14■□□□□ 0.01
CHRNA1-203ENST00000409219 HIC1Q14526 733 aa15.14■□□□□ 0.01
CHRNA1-203ENST00000409219 MFSD10Q14728 455 aa15.14■□□□□ 0.01
CHRNA1-203ENST00000409219 CLUL1Q15846 466 aa15.14■□□□□ 0.01
CHRNA1-203ENST00000409219 DGKDQ16760 1214 aa15.14■□□□□ 0.01
CHRNA1-203ENST00000409219 KIAA0753Q2KHM9 967 aa15.14■□□□□ 0.01
CHRNA1-203ENST00000409219 CTC1Q2NKJ3 1217 aa15.14■□□□□ 0.01
CHRNA1-203ENST00000409219 PLEKHG4Q58EX7 1191 aa15.14■□□□□ 0.01
CHRNA1-203ENST00000409219 YME1L1Q96TA2 773 aa15.14■□□□□ 0.01
CHRNA1-203ENST00000409219 POP1Q99575 1024 aaKnown RBP15.14■□□□□ 0.01
CHRNA1-203ENST00000409219 KATNAL1Q9BW62 490 aa15.14■□□□□ 0.01
CHRNA1-203ENST00000409219 DDX19BQ9UMR2 479 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms